Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 5.6e-144 514.2 252 100.0
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 1.1e-78 297.4 201 70.1
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 9.0e-78 294.3 205 67.8
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 4.5e-77 292.0 184 74.5
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 2.9e-76 289.3 197 70.6
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 2.9e-76 289.3 193 72.0
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 5.0e-76 288.5 263 57.0
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 5.0e-76 288.5 263 58.6
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 5.0e-76 288.5 191 70.7
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 5.0e-76 288.5 255 59.2
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 8.5e-76 287.7 185 74.1
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 1.4e-75 287.0 182 73.6
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 3.2e-75 285.8 195 70.8
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 5.5e-75 285.0 195 70.3
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 7.2e-75 284.6 178 75.8
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 7.2e-75 284.6 184 73.4
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 1.6e-74 283.5 178 75.3
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 1.6e-74 283.5 178 75.3
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 1.6e-74 283.5 207 67.1
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 3.6e-74 282.3 198 70.2
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 3.6e-74 282.3 198 70.2
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 3.6e-74 282.3 265 57.0
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 6.1e-74 281.6 240 60.8
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 1.8e-73 280.0 184 72.3
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 2.3e-73 279.6 194 68.6
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 3.0e-73 279.3 188 70.2
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 5.1e-73 278.5 213 64.8
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 5.1e-73 278.5 220 63.2
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 5.1e-73 278.5 178 74.2
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 5.1e-73 278.5 261 55.2
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 6.7e-73 278.1 179 73.7
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 8.8e-73 277.7 208 67.3
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 8.8e-73 277.7 204 67.6
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 1.1e-72 277.3 199 66.8
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 1.1e-72 277.3 253 57.3
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 1.1e-72 277.3 196 69.9
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 1.5e-72 276.9 178 72.5
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 1.5e-72 276.9 201 67.2
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 2.0e-72 276.6 194 69.1
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 3.3e-72 275.8 230 62.6
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 3.3e-72 275.8 178 73.6
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 4.3e-72 275.4 179 73.7
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 5.7e-72 275.0 199 67.3
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 5.7e-72 275.0 203 67.0
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 7.4e-72 274.6 179 73.2
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 7.4e-72 274.6 195 68.2
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 9.7e-72 274.2 178 72.5
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 1.3e-71 273.9 229 62.9
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 2.2e-71 273.1 193 71.0
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 2.8e-71 272.7 184 71.7
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 2.8e-71 272.7 175 74.9
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 3.7e-71 272.3 179 72.6
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 3.7e-71 272.3 178 73.0
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 4.8e-71 271.9 206 64.6
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 8.2e-71 271.2 203 68.0
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.4e-70 270.4 178 71.3
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 1.4e-70 270.4 179 72.6
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 1.4e-70 270.4 205 64.9
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 1.8e-70 270.0 188 69.1
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 1.8e-70 270.0 197 67.5
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 2.4e-70 269.6 178 71.3
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 3.1e-70 269.2 203 64.0
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 4.1e-70 268.9 179 71.5
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 5.9e-69 265.0 212 61.8
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 1.0e-68 264.2 181 70.7
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 2.2e-68 263.1 230 58.3
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 2.9e-68 262.7 195 68.2
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 5.0e-68 261.9 248 56.5
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 6.5e-68 261.5 262 56.5
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.9e-67 260.0 287 52.3
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 7.2e-67 258.1 190 67.4
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.2e-66 257.3 154 77.9
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 2.7e-66 256.1 197 64.5
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 1.1e-64 250.8 183 65.0
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 4.4e-64 248.8 197 62.9
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 3.7e-63 245.7 152 75.0
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 4.1e-62 242.3 200 61.0
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 1.2e-61 240.7 199 62.3
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 1.0e-60 237.7 195 60.5
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 2.2e-60 236.5 153 72.5
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 8.5e-60 234.6 169 67.5
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 2.5e-59 233.0 185 61.1
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 5.5e-59 231.9 200 58.5
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 2.1e-58 229.9 188 60.6
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 8.0e-58 228.0 195 61.5
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 5.2e-57 225.3 187 61.5
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 2.0e-56 223.4 178 62.9
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 7.2e-51 204.9 151 66.9
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 1.6e-50 203.8 123 78.0
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 8.8e-49 198.0 164 63.4
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.7e-45 186.4 131 67.9
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 1.7e-44 183.7 115 73.0
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 5.7e-40 168.7 160 55.0
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 9.8e-40 167.9 192 49.0
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 3.1e-38 162.9 99 79.8
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.2e-34 151.0 98 68.4
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 1.2e-29 134.4 129 56.6
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 2.3e-28 130.2 65 96.9
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 1.6e-26 124.0 70 81.4
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 6.8e-17 92.0 58 75.9


User provided reference genes

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