Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 0.0e+00 3125.9 1549 100.0
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 0.0e+00 1660.2 1580 55.1
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 0.0e+00 1520.8 1590 51.6
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 0.0e+00 1478.0 1577 51.0
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1471.4 1583 51.1
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1457.2 1588 50.6
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 0.0e+00 1448.3 1586 50.1
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 0.0e+00 1433.7 1586 50.3
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 0.0e+00 1426.4 1610 49.4
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 0.0e+00 1424.5 1586 49.4
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 0.0e+00 1411.0 1598 49.9
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 0.0e+00 1411.0 1623 49.6
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 0.0e+00 1395.6 1584 49.6
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 0.0e+00 1394.8 1588 48.9
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1394.4 1593 49.4
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 0.0e+00 1394.0 1582 49.4
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 0.0e+00 1391.7 1594 49.7
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 0.0e+00 1390.2 1469 52.9
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 0.0e+00 1388.6 1588 48.9
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 0.0e+00 1386.3 1563 50.6
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 0.0e+00 1384.8 1581 48.5
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 0.0e+00 1380.9 1597 48.3
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 0.0e+00 1375.9 1591 48.9
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1374.4 1580 49.1
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1373.6 1598 47.8
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1369.4 1597 48.0
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 0.0e+00 1367.4 1605 48.5
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 0.0e+00 1355.9 1533 49.3
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1355.9 1554 48.6
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 0.0e+00 1341.3 1593 47.2
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 0.0e+00 1339.7 1610 47.8
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 0.0e+00 1338.6 1614 47.5
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1335.5 1686 45.6
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 0.0e+00 1328.2 1583 47.9
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 0.0e+00 1312.0 1626 46.7
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 0.0e+00 1312.0 1576 47.4
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 0.0e+00 1311.2 1587 46.9
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 0.0e+00 1309.7 1577 47.1
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 0.0e+00 1309.7 1604 46.2
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1308.5 1598 46.5
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 0.0e+00 1307.7 1576 47.3
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 0.0e+00 1306.6 1587 47.0
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 0.0e+00 1301.6 1576 47.5
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1300.8 1580 47.2
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1300.4 1677 45.0
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 0.0e+00 1298.5 1574 47.6
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 0.0e+00 1295.0 1633 45.9
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1294.6 1570 47.2
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1291.6 1576 46.9
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1288.5 1589 47.0
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 0.0e+00 1285.0 1602 45.6
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 0.0e+00 1281.9 1586 47.2
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 0.0e+00 1277.7 1576 47.0
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1275.8 1575 46.6
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 0.0e+00 1273.8 1601 45.8
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 0.0e+00 1266.5 1575 46.3
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 0.0e+00 1266.1 1586 45.3
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 0.0e+00 1263.1 1578 44.7
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 0.0e+00 1262.3 1540 46.6
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 0.0e+00 1258.4 1585 45.5
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1254.6 1580 45.6
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 0.0e+00 1253.8 1591 45.4
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 0.0e+00 1252.3 1573 45.5
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1251.9 1582 46.0
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 0.0e+00 1250.3 1563 46.2
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1250.0 1589 45.1
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 0.0e+00 1246.9 1597 45.3
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 0.0e+00 1246.1 1599 45.0
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 0.0e+00 1242.6 1588 45.2
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1241.5 1561 44.8
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1240.7 1577 45.4
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 0.0e+00 1238.0 1569 45.2
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 0.0e+00 1237.2 1591 45.1
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1236.9 1576 45.2
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1236.9 1580 45.3
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1236.9 1580 45.3
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 0.0e+00 1229.5 1581 45.2
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1228.0 1586 45.0
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 0.0e+00 1227.2 1589 45.6
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1226.5 1578 44.8
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 0.0e+00 1225.7 1578 45.2
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1220.7 1586 44.9
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1211.8 1414 49.0
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 0.0e+00 1207.6 1643 44.6
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 0.0e+00 1193.3 1563 44.1
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 0.0e+00 1181.0 1594 43.3
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 0.0e+00 1172.9 1598 43.9
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 0.0e+00 1172.5 1571 43.7
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 0.0e+00 1121.7 1350 47.2
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 0.0e+00 1114.0 1425 45.0
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 0.0e+00 1111.3 1489 44.1
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1097.0 1396 46.1
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 2.7e-305 1052.7 1194 49.2
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 2.2e-299 1033.1 1512 41.4
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 1.5e-284 983.8 1062 51.2
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 6.8e-277 958.4 1668 37.1
COL.COLO4_08357 Corchorus olitorius HOM05D006693 ORTHO05D008092 5.0e-211 739.6 1066 41.7
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 1.4e-189 668.3 1563 31.9
SEGI_35152 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 4.0e-176 623.6 1034 37.3
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.8e-168 598.2 488 65.6
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 6.8e-168 596.3 488 63.5
CARHR255320 Cardamine hirsuta HOM05D006693 ORTHO05D008092 3.2e-165 587.4 969 38.9
Os06g0331300 Oryza sativa ssp. japonica HOM05D006693 ORTHO05D008092 1.2e-143 515.8 708 41.2
Cpa.g.sc180.1 Carica papaya HOM05D006693 ORTHO05D008092 3.5e-95 354.8 413 49.6
SEGI_07995 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 3.4e-82 311.6 620 33.1
FAN08G3186 Fragaria x ananassa HOM05D006693 ORTHO05D008092 2.0e-42 179.5 198 48.5
Cpa.g.sc180.2 Carica papaya HOM05D006693 ORTHO05D008092 1.1e-37 163.7 164 55.5
ClCG07G007840 Citrullus lanatus HOM05D006693 ORTHO05D008092 3.2e-32 145.6 107 61.7
SEGI_11223 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 1.8e-27 129.8 88 73.9
SEGI_38420 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 1.8e-27 129.8 88 73.9
Cpa.g.sc180.5 Carica papaya HOM05D006693 ORTHO05D008092 5.5e-24 118.2 91 57.1
CAN.G532.47 Capsicum annuum HOM05D006693 ORTHO05D008092 1.5e-18 100.1 89 52.8
Cpa.g.sc180.3 Carica papaya HOM05D006693 ORTHO05D008092 1.5e-18 100.1 82 63.4
Actinidia27361 Actinidia chinensis HOM05D006693 ORTHO05D008092 6.5e-17 94.7 83 51.8
Cpa.g.c42974 Carica papaya HOM05D006693 ORTHO05D008092 8.4e-17 94.4 85 55.3
Actinidia33728 Actinidia chinensis HOM05D006693 ORTHO05D008092 4.6e-15 88.6 67 71.6


User provided reference genes

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