Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 4.5e-52 207.6 103 100.0
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 2.5e-26 122.1 81 75.3
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 4.3e-26 121.3 69 81.2
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 2.1e-25 119.0 91 63.7
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 2.8e-25 118.6 95 65.3
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 8.1e-25 117.1 66 83.3
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 8.1e-25 117.1 66 83.3
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 8.1e-25 117.1 66 84.8
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 8.1e-25 117.1 66 83.3
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 1.1e-24 116.7 69 81.2
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 1.8e-24 115.9 66 81.8
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 1.8e-24 115.9 66 81.8
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 1.8e-24 115.9 66 81.8
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 4.0e-24 114.8 69 78.3
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 5.2e-24 114.4 66 81.8
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 5.2e-24 114.4 86 67.4
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 6.8e-24 114.0 68 82.4
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 1.5e-23 112.8 62 83.9
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 2.0e-23 112.5 85 68.2
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 2.0e-23 112.5 71 71.8
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 3.4e-23 111.7 90 63.3
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.4e-23 111.7 90 63.3
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.4e-23 111.7 90 63.3
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 3.4e-23 111.7 66 75.8
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 3.4e-23 111.7 66 75.8
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 3.4e-23 111.7 66 75.8
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 3.4e-23 111.7 70 74.3
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 4.4e-23 111.3 93 61.3
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 4.4e-23 111.3 64 81.2
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 4.4e-23 111.3 69 75.4
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 5.8e-23 110.9 84 65.5
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 7.6e-23 110.5 90 63.3
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 2.2e-22 109.0 93 63.4
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 2.2e-22 109.0 69 73.9
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 2.2e-22 109.0 73 69.9
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 2.9e-22 108.6 90 64.4
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 2.9e-22 108.6 84 64.3
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 2.9e-22 108.6 71 70.4
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 3.8e-22 108.2 64 79.7
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 3.8e-22 108.2 71 69.0
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 3.8e-22 108.2 68 75.0
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 4.9e-22 107.8 71 69.0
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 4.9e-22 107.8 104 54.8
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 4.9e-22 107.8 66 74.2
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 4.9e-22 107.8 65 76.9
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 6.4e-22 107.5 91 61.5
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 6.4e-22 107.5 64 79.7
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 6.4e-22 107.5 62 82.3
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 8.4e-22 107.1 66 77.3
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 8.4e-22 107.1 87 63.2
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 1.1e-21 106.7 90 63.3
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 1.1e-21 106.7 90 63.3
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 1.1e-21 106.7 94 60.6
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 1.1e-21 106.7 75 69.3
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.1e-21 106.7 64 76.6
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 1.9e-21 105.9 71 71.8
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 1.9e-21 105.9 66 74.2
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 1.9e-21 105.9 90 61.1
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 1.9e-21 105.9 64 76.6
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 3.2e-21 105.1 66 75.8
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 4.2e-21 104.8 90 60.0
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 4.2e-21 104.8 71 70.4
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 5.4e-21 104.4 71 71.8
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 9.2e-21 103.6 62 79.0
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 9.2e-21 103.6 93 59.1
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 9.2e-21 103.6 60 78.3
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 1.2e-20 103.2 69 72.5
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 1.2e-20 103.2 64 78.1
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 1.6e-20 102.8 71 71.8
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 1.6e-20 102.8 71 70.4
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 2.1e-20 102.4 90 61.1
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 2.1e-20 102.4 70 68.6
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 2.7e-20 102.1 65 75.4
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 3.5e-20 101.7 69 69.6
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 3.5e-20 101.7 66 74.2
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 4.6e-20 101.3 65 73.8
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 4.6e-20 101.3 64 73.4
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 4.6e-20 101.3 64 76.6
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 4.6e-20 101.3 62 74.2
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 1.0e-19 100.1 99 57.6
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 1.3e-19 99.8 70 72.9
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 3.0e-19 98.6 67 67.2
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 3.9e-19 98.2 66 69.7
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 6.6e-19 97.4 62 75.8
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 6.6e-19 97.4 82 61.0
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 1.5e-18 96.3 59 76.3
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 3.3e-18 95.1 66 63.6
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 5.6e-18 94.4 88 58.0
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 5.6e-18 94.4 62 69.4
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.3e-17 93.2 68 66.2
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.1e-17 92.4 80 61.2
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.1e-17 92.4 80 61.2
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 2.8e-17 92.0 88 51.1
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 6.2e-17 90.9 64 67.2
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 6.2e-17 90.9 93 51.6
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 8.1e-17 90.5 86 54.7
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 8.1e-17 90.5 90 51.1
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 8.1e-17 90.5 90 51.1
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 8.1e-17 90.5 90 51.1
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 8.1e-17 90.5 78 61.5
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 2.4e-16 89.0 79 59.5
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 4.0e-16 88.2 62 64.5
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 1.2e-15 86.7 86 52.3
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 8.4e-14 80.5 97 46.4
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 6.0e-12 74.3 54 63.0
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 1.7e-11 72.8 65 60.0
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.9e-10 69.3 51 68.6


User provided reference genes

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