Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0721G047 Amborella trichopoda HOM05D005532 ORTHO05D006873 8.4e-137 490.3 246 100.0
Manes.14G005300 Manihot esculenta HOM05D005532 ORTHO05D006873 4.6e-103 378.3 233 79.4
Potri.009G050100 Populus trichocarpa HOM05D005532 ORTHO05D006873 5.1e-102 374.8 233 78.1
TAR636G1137 Trochodendron aralioides HOM05D005532 ORTHO05D006873 1.1e-101 373.6 228 79.4
Dinv36220 Davidia involucrata HOM05D005532 ORTHO05D006873 1.5e-101 373.2 228 79.4
Nn7g36397 Nelumbo nucifera HOM05D005532 ORTHO05D006873 1.5e-101 373.2 228 79.8
Sabra09G0036700 Salix brachista HOM05D005532 ORTHO05D006873 7.4e-101 370.9 233 77.3
TWI60G0905 Tripterygium wilfordii HOM05D005532 ORTHO05D006873 9.7e-101 370.5 233 75.5
GSVIVG01031546001 Vitis vinifera HOM05D005532 ORTHO05D006873 1.7e-100 369.8 228 78.9
Aqoxy2G00249 Aquilegia oxysepala HOM05D005532 ORTHO05D006873 3.7e-100 368.6 228 75.9
CiPaw.13G154000 Carya illinoinensis HOM05D005532 ORTHO05D006873 1.4e-99 366.7 228 77.6
Eucgr.J00735 Eucalyptus grandis HOM05D005532 ORTHO05D006873 1.8e-99 366.3 228 78.5
Duzib168G1386 Durio zibethinus HOM05D005532 ORTHO05D006873 2.4e-99 365.9 233 75.5
Cpa.g.sc892.3 Carica papaya HOM05D005532 ORTHO05D006873 3.1e-99 365.5 235 74.0
Lj3g0021729 Lotus japonicus HOM05D005532 ORTHO05D006873 3.1e-99 365.5 242 72.7
Lalb_Chr19g0139721 Lupinus albus HOM05D005532 ORTHO05D006873 2.0e-98 362.8 238 75.6
Thecc.09G240600 Theobroma cacao HOM05D005532 ORTHO05D006873 2.0e-98 362.8 228 76.8
Cfa009820 Carpinus fangiana HOM05D005532 ORTHO05D006873 2.6e-98 362.5 228 78.1
arahy.Tifrunner.gnm1.ann1.7Y4SN4 Arachis hypogaea HOM05D005532 ORTHO05D006873 3.4e-98 362.1 229 77.7
Gohir.A07G122800 Gossypium hirsutum HOM05D005532 ORTHO05D006873 3.4e-98 362.1 231 75.8
arahy.Tifrunner.gnm1.ann1.3FY9NR Arachis hypogaea HOM05D005532 ORTHO05D006873 4.5e-98 361.7 229 77.7
COL.COLO4_36473 Corchorus olitorius HOM05D005532 ORTHO05D006873 4.5e-98 361.7 228 76.3
FvH4_3g28350 Fragaria vesca HOM05D005532 ORTHO05D006873 4.5e-98 361.7 227 75.3
FAN16G3415 Fragaria x ananassa HOM05D005532 ORTHO05D006873 4.5e-98 361.7 227 75.3
FAN25G0557 Fragaria x ananassa HOM05D005532 ORTHO05D006873 4.5e-98 361.7 227 75.3
CANSAT54G2729 Cannabis sativa HOM05D005532 ORTHO05D006873 5.9e-98 361.3 227 75.8
CSS0007885 Camellia sinensis var. sinensis HOM05D005532 ORTHO05D006873 1.0e-97 360.5 227 76.7
HanXRQChr02g0051521 Helianthus annuus HOM05D005532 ORTHO05D006873 1.0e-97 360.5 228 76.3
HanXRQChr13g0401441 Helianthus annuus HOM05D005532 ORTHO05D006873 1.3e-97 360.1 228 75.9
Hma1.2p1_2169F.1_g315920 Hydrangea macrophylla HOM05D005532 ORTHO05D006873 1.3e-97 360.1 240 74.2
TPR.G22568 Trifolium pratense HOM05D005532 ORTHO05D006873 1.7e-97 359.8 228 75.4
Actinidia23981 Actinidia chinensis HOM05D005532 ORTHO05D006873 2.2e-97 359.4 228 76.3
Glyma.12G021500 Glycine max HOM05D005532 ORTHO05D006873 2.9e-97 359.0 239 72.8
MD11G1188300 Malus domestica HOM05D005532 ORTHO05D006873 2.9e-97 359.0 228 75.0
PGR119G0320 Punica granatum HOM05D005532 ORTHO05D006873 2.9e-97 359.0 228 76.3
RcHm_v2.0_Chr5g0053381 Rosa chinensis HOM05D005532 ORTHO05D006873 2.9e-97 359.0 227 76.2
VMungo1127G1594 Vigna mungo HOM05D005532 ORTHO05D006873 2.9e-97 359.0 228 75.9
AUR62000162 Chenopodium quinoa HOM05D005532 ORTHO05D006873 3.8e-97 358.6 228 76.3
Gorai.001G136900 Gossypium raimondii HOM05D005532 ORTHO05D006873 3.8e-97 358.6 233 74.2
Ciclev10015321m.g Citrus clementina HOM05D005532 ORTHO05D006873 5.0e-97 358.2 233 74.7
PSO339G2797 Papaver somniferum HOM05D005532 ORTHO05D006873 6.5e-97 357.8 228 75.9
Cc01_g02130 Coffea canephora HOM05D005532 ORTHO05D006873 8.5e-97 357.5 230 75.2
Gohir.D07G126700 Gossypium hirsutum HOM05D005532 ORTHO05D006873 8.5e-97 357.5 233 73.8
Medtr4g076230 Medicago truncatula HOM05D005532 ORTHO05D006873 1.1e-96 357.1 230 75.7
AUR62039849 Chenopodium quinoa HOM05D005532 ORTHO05D006873 1.4e-96 356.7 228 75.9
Oeu043291.1 Olea europaea HOM05D005532 ORTHO05D006873 1.4e-96 356.7 228 75.9
Atru.chr3.2637 Acer truncatum HOM05D005532 ORTHO05D006873 2.5e-96 355.9 228 76.8
Actinidia11667 Actinidia chinensis HOM05D005532 ORTHO05D006873 5.5e-96 354.8 228 74.6
Phvul.011G078100 Phaseolus vulgaris HOM05D005532 ORTHO05D006873 5.5e-96 354.8 228 75.9
FAN21G2390 Fragaria x ananassa HOM05D005532 ORTHO05D006873 9.4e-96 354.0 227 73.6
PSO384G4693 Papaver somniferum HOM05D005532 ORTHO05D006873 2.7e-95 352.4 228 74.6
Prupe.4G256000 Prunus persica HOM05D005532 ORTHO05D006873 2.7e-95 352.4 228 75.0
HPP92_011271 Vanilla planifolia HOM05D005532 ORTHO05D006873 2.7e-95 352.4 228 75.0
Nitab4.5_0005230g0080 Nicotiana tabacum HOM05D005532 ORTHO05D006873 3.6e-95 352.1 228 75.4
ECA233G0258 Erigeron canadensis HOM05D005532 ORTHO05D006873 4.7e-95 351.7 230 73.0
Nitab4.5_0011829g0040 Nicotiana tabacum HOM05D005532 ORTHO05D006873 4.7e-95 351.7 228 74.6
PGSC0003DMG400038188 Solanum tuberosum HOM05D005532 ORTHO05D006873 4.7e-95 351.7 227 74.9
HPP92_011292 Vanilla planifolia HOM05D005532 ORTHO05D006873 4.7e-95 351.7 228 74.6
Glyma.11G095400 Glycine max HOM05D005532 ORTHO05D006873 7.9e-95 350.9 238 71.8
Solyc11g065240.2 Solanum lycopersicum HOM05D005532 ORTHO05D006873 7.9e-95 350.9 227 74.9
Lj1A319T38 Lonicera japonica HOM05D005532 ORTHO05D006873 1.0e-94 350.5 266 67.3
SGA_v2.0_scaffold29G12299 Striga asiatica HOM05D005532 ORTHO05D006873 1.4e-94 350.1 228 74.1
CAN.G870.1 Capsicum annuum HOM05D005532 ORTHO05D006873 1.8e-94 349.7 227 74.4
Migut.D00633 Erythranthe guttata HOM05D005532 ORTHO05D006873 1.8e-94 349.7 228 74.1
Peaxi162Scf00004g00378 Petunia axillaris HOM05D005532 ORTHO05D006873 2.3e-94 349.4 228 74.6
Sopen11g024960 Solanum pennellii HOM05D005532 ORTHO05D006873 3.0e-94 349.0 227 74.4
unitig_52.g16880 Utricularia gibba HOM05D005532 ORTHO05D006873 6.7e-94 347.8 233 70.4
Zm00001eb093270 Zea mays HOM05D005532 ORTHO05D006873 6.7e-94 347.8 228 74.1
THA.LOC104821584 Tarenaya hassleriana HOM05D005532 ORTHO05D006873 8.8e-94 347.4 228 74.6
Lsat_1_v5_gn_6_26061 Lactuca sativa HOM05D005532 ORTHO05D006873 1.1e-93 347.1 228 71.5
EL10Ac4g10189 Beta vulgaris HOM05D005532 ORTHO05D006873 2.0e-93 346.3 229 74.7
Os12g0137200 Oryza sativa ssp. japonica HOM05D005532 ORTHO05D006873 3.3e-93 345.5 241 70.5
Psat7g179480 Pisum sativum HOM05D005532 ORTHO05D006873 4.4e-93 345.1 262 67.2
MELO3C014575.2 Cucumis melo HOM05D005532 ORTHO05D006873 5.7e-93 344.7 228 74.1
Sp1g37280 Schrenkiella parvula HOM05D005532 ORTHO05D006873 5.7e-93 344.7 228 71.9
Sed0019503 Sechium edule HOM05D005532 ORTHO05D006873 2.8e-92 342.4 228 73.7
Hund07456 Selenicereus undatus HOM05D005532 ORTHO05D006873 2.8e-92 342.4 228 73.7
Thhalv10011503m.g Eutrema salsugineum HOM05D005532 ORTHO05D006873 6.3e-92 341.3 228 71.5
BcaC08g43214 Brassica carinata HOM05D005532 ORTHO05D006873 1.8e-91 339.7 228 71.5
Carub.0001s3953 Capsella rubella HOM05D005532 ORTHO05D006873 1.8e-91 339.7 228 70.6
Rhsim01G0193400 Rhododendron simsii HOM05D005532 ORTHO05D006873 1.8e-91 339.7 255 66.7
AT1G50450 Arabidopsis thaliana HOM05D005532 ORTHO05D006873 2.4e-91 339.3 228 70.6
RhsimUnG0131400 Rhododendron simsii HOM05D005532 ORTHO05D006873 2.4e-91 339.3 239 70.7
BcaB07g33482 Brassica carinata HOM05D005532 ORTHO05D006873 3.1e-91 339.0 228 71.5
Sc09g0000860 Simmondsia chinensis HOM05D005532 ORTHO05D006873 7.0e-91 337.8 234 70.9
Haze_23183 Corylus avellana HOM05D005532 ORTHO05D006873 2.6e-90 335.9 281 63.7
Hund07457 Selenicereus undatus HOM05D005532 ORTHO05D006873 2.6e-90 335.9 228 72.8
AL1G58090 Arabidopsis lyrata HOM05D005532 ORTHO05D006873 4.5e-90 335.1 228 70.2
AUR62039851 Chenopodium quinoa HOM05D005532 ORTHO05D006873 1.3e-89 333.6 228 71.1
AagrBONN_evm.TU.Sc2ySwM_117.1967 Anthoceros agrestis HOM05D005532 ORTHO05D006873 2.2e-89 332.8 229 69.0
ClCG02G023050 Citrullus lanatus HOM05D005532 ORTHO05D006873 9.4e-88 327.4 269 63.2
QL01p018283 Quercus lobata HOM05D005532 ORTHO05D006873 1.6e-87 326.6 202 78.2
A06p03120 Brassica napus HOM05D005532 ORTHO05D006873 4.7e-87 325.1 228 70.2
BraA06t23525Z Brassica rapa HOM05D005532 ORTHO05D006873 4.7e-87 325.1 228 70.2
CDE04G2597 Ceratophyllum demersum HOM05D005532 ORTHO05D006873 8.0e-87 324.3 228 69.3
C06p05640 Brassica napus HOM05D005532 ORTHO05D006873 1.8e-86 323.2 228 69.7
BolC6t35671H Brassica oleracea HOM05D005532 ORTHO05D006873 1.8e-86 323.2 228 69.7
vmacro14267 Vaccinium macrocarpon HOM05D005532 ORTHO05D006873 3.0e-86 322.4 289 59.5
MBI05_g22559_MAGBIO Magnolia biondii HOM05D005532 ORTHO05D006873 8.2e-84 314.3 192 82.3
arahy.Tifrunner.gnm1.ann1.PT8LN6 Arachis hypogaea HOM05D005532 ORTHO05D006873 2.4e-83 312.8 229 67.2
Aa31LG10G3830 Aethionema arabicum HOM05D005532 ORTHO05D006873 7.0e-83 311.2 230 68.3
Mapoly0066s0102 Marchantia polymorpha HOM05D005532 ORTHO05D006873 1.3e-81 307.0 233 61.4
unitig_62.g23891 Utricularia gibba HOM05D005532 ORTHO05D006873 3.8e-81 305.4 236 61.9
Lsat_1_v5_gn_6_26080 Lactuca sativa HOM05D005532 ORTHO05D006873 6.5e-81 304.7 228 63.2
Sc09g0000870 Simmondsia chinensis HOM05D005532 ORTHO05D006873 1.2e-79 300.4 191 77.0
Aa31LG10G3840 Aethionema arabicum HOM05D005532 ORTHO05D006873 4.0e-78 295.4 229 61.6
Haze_23184 Corylus avellana HOM05D005532 ORTHO05D006873 8.8e-78 294.3 228 67.5
CsaV3_6G039150 Cucumis sativus L. HOM05D005532 ORTHO05D006873 2.6e-77 292.7 192 74.5
CARHR040460 Cardamine hirsuta HOM05D005532 ORTHO05D006873 2.2e-76 289.7 202 68.8
Pp3c19_6050 Physcomitrium patens HOM05D005532 ORTHO05D006873 4.8e-76 288.5 228 62.3
SMO367G1041 Selaginella moellendorffii HOM05D005532 ORTHO05D006873 7.0e-75 284.6 227 62.1
DCAR_023774 Daucus carota HOM05D005532 ORTHO05D006873 9.1e-75 284.3 232 62.1
Cre16.g666050 Chlamydomonas reinhardtii HOM05D005532 ORTHO05D006873 3.4e-61 239.2 241 51.9
MCO10G311 Micromonas commoda HOM05D005532 ORTHO05D006873 3.9e-57 225.7 241 48.1
Ah.04g162030 Amaranthus hybridus HOM05D005532 ORTHO05D006873 2.3e-54 216.5 228 52.6
Migut.D00646 Erythranthe guttata HOM05D005532 ORTHO05D006873 1.2e-53 214.2 182 58.8
CBR_g3868 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-48 196.4 166 59.0
SGA_v2.0_scaffold29G12269 Striga asiatica HOM05D005532 ORTHO05D006873 1.4e-38 164.1 139 53.2
arahy.Tifrunner.gnm1.ann1.E0YEAW Arachis hypogaea HOM05D005532 ORTHO05D006873 5.6e-32 142.1 147 55.1
SEGI_01123 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 1.5e-29 134.0 95 74.7
PRCOL_00003498 Prasinoderma coloniale HOM05D005532 ORTHO05D006873 3.4e-29 132.9 230 35.2
arahy.Tifrunner.gnm1.ann1.C2XCQ2 Arachis hypogaea HOM05D005532 ORTHO05D006873 2.6e-21 106.7 69 75.4
arahy.Tifrunner.gnm1.ann1.MM015B Arachis hypogaea HOM05D005532 ORTHO05D006873 3.4e-21 106.3 76 63.2
SEGI_35247 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 1.7e-20 104.0 64 70.3
PRCOL_00002357 Prasinoderma coloniale HOM05D005532 ORTHO05D006873 4.6e-18 95.9 253 30.4
SalBow6G6953 Salvia bowleyana HOM05D005532 ORTHO05D006873 1.8e-17 94.0 73 60.3
Ciclev10017011m.g Citrus clementina HOM05D005532 ORTHO05D006873 4.3e-16 89.4 71 60.6
CsaV3_6G039160 Cucumis sativus L. HOM05D005532 ORTHO05D006873 4.0e-06 56.2 36 69.4


User provided reference genes

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