Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0721G043 Amborella trichopoda HOM05D002620 ORTHO05D006469 3.7e-67 258.1 131 100.0
ATR0757G130 Amborella trichopoda HOM05D002620 ORTHO05D006469 3.7e-14 82.0 48 81.2
Dinv03022 Davidia involucrata HOM05D002620 ORTHO05D006469 4.6e-09 65.1 47 68.1
Dinv01365 Davidia involucrata HOM05D002620 ORTHO05D006469 5.1e-08 61.6 47 66.0
FAN28G0365 Fragaria x ananassa HOM05D002620 ORTHO05D006469 5.1e-08 61.6 90 43.3
Nn1g02057 Nelumbo nucifera HOM05D002620 ORTHO05D006469 5.1e-08 61.6 49 59.2
CDE04G0754 Ceratophyllum demersum HOM05D002620 ORTHO05D006469 6.7e-08 61.2 67 44.8
vmacro07605 Vaccinium macrocarpon HOM05D002620 ORTHO05D006469 1.1e-07 60.5 79 41.8
AL3G19970 Arabidopsis lyrata HOM05D002620 ORTHO05D006469 1.5e-07 60.1 83 41.0
FAN28G0536 Fragaria x ananassa HOM05D002620 ORTHO05D006469 1.5e-07 60.1 90 43.3
HanXRQChr06g0182221 Helianthus annuus HOM05D002620 ORTHO05D006469 1.5e-07 60.1 50 54.0
ClCG04G006940 Citrullus lanatus HOM05D002620 ORTHO05D006469 1.9e-07 59.7 72 45.8
TAR623G0172 Trochodendron aralioides HOM05D002620 ORTHO05D006469 1.9e-07 59.7 58 53.4
Atru.chr8.2267 Acer truncatum HOM05D002620 ORTHO05D006469 2.5e-07 59.3 114 36.0
MBI08_g18760_MAGBIO Magnolia biondii HOM05D002620 ORTHO05D006469 2.5e-07 59.3 47 57.4
CiPaw.09G211100 Carya illinoinensis HOM05D002620 ORTHO05D006469 3.3e-07 58.9 47 59.6
Ciclev10012213m.g Citrus clementina HOM05D002620 ORTHO05D006469 3.3e-07 58.9 48 60.4
Manes.09G107200 Manihot esculenta HOM05D002620 ORTHO05D006469 3.3e-07 58.9 47 59.6
Phvul.008G096600 Phaseolus vulgaris HOM05D002620 ORTHO05D006469 4.3e-07 58.5 44 63.6
VMungo1383G1480 Vigna mungo HOM05D002620 ORTHO05D006469 4.3e-07 58.5 39 64.1
RcHm_v2.0_Chr7g0216861 Rosa chinensis HOM05D002620 ORTHO05D006469 5.7e-07 58.2 90 41.1
BolC3t16658H Brassica oleracea HOM05D002620 ORTHO05D006469 1.3e-06 57.0 82 40.2
GSVIVG01011183001 Vitis vinifera HOM05D002620 ORTHO05D006469 1.3e-06 57.0 50 54.0
MSTRG.10211 Avicennia marina HOM05D002620 ORTHO05D006469 1.6e-06 56.6 47 55.3
Eucgr.A00532 Eucalyptus grandis HOM05D002620 ORTHO05D006469 1.6e-06 56.6 43 58.1
Cpa.g.sc11.86 Carica papaya HOM05D002620 ORTHO05D006469 2.2e-06 56.2 35 71.4
HanXRQChr16g0508591 Helianthus annuus HOM05D002620 ORTHO05D006469 2.2e-06 56.2 60 48.3
Lsat_1_v5_gn_8_101621 Lactuca sativa HOM05D002620 ORTHO05D006469 2.2e-06 56.2 58 50.0
Aqoxy2G00103 Aquilegia oxysepala HOM05D002620 ORTHO05D006469 3.7e-06 55.5 88 39.8
CSS0042358 Camellia sinensis var. sinensis HOM05D002620 ORTHO05D006469 3.7e-06 55.5 71 47.9
Hma1.2p1_0362F.1_g136450 Hydrangea macrophylla HOM05D002620 ORTHO05D006469 3.7e-06 55.5 59 47.5
Hma1.2p1_0362F.1_g136460 Hydrangea macrophylla HOM05D002620 ORTHO05D006469 3.7e-06 55.5 59 47.5
Lj1g0002904 Lotus japonicus HOM05D002620 ORTHO05D006469 3.7e-06 55.5 30 73.3
MELO3C025997.2 Cucumis melo HOM05D002620 ORTHO05D006469 4.8e-06 55.1 30 76.7
CsaV3_4G026320 Cucumis sativus L. HOM05D002620 ORTHO05D006469 4.8e-06 55.1 30 76.7
FAN26G2649 Fragaria x ananassa HOM05D002620 ORTHO05D006469 4.8e-06 55.1 83 41.0
Glyma.07G152200 Glycine max HOM05D002620 ORTHO05D006469 4.8e-06 55.1 37 67.6
Hund10986 Selenicereus undatus HOM05D002620 ORTHO05D006469 4.8e-06 55.1 38 60.5
TAR636G0672 Trochodendron aralioides HOM05D002620 ORTHO05D006469 4.8e-06 55.1 43 62.8
Lj1g0015893 Lotus japonicus HOM05D002620 ORTHO05D006469 6.3e-06 54.7 39 59.0
LjContig00408g0009428 Lotus japonicus HOM05D002620 ORTHO05D006469 6.3e-06 54.7 30 76.7
SalBow4G1934 Salvia bowleyana HOM05D002620 ORTHO05D006469 6.3e-06 54.7 66 40.9
Glyma.18G203300 Glycine max HOM05D002620 ORTHO05D006469 8.2e-06 54.3 39 64.1
Sed0003396 Sechium edule HOM05D002620 ORTHO05D006469 8.2e-06 54.3 110 32.7


User provided reference genes

Program Settings