Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 2.7e-149 531.9 260 100.0
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 1.0e-63 247.7 271 47.2
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 7.2e-62 241.5 270 47.4
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 9.4e-62 241.1 272 46.3
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 7.9e-61 238.0 272 47.1
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 1.8e-60 236.9 271 47.6
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 2.6e-59 233.0 271 46.5
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 4.4e-59 232.3 262 47.7
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 5.7e-59 231.9 275 48.0
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 7.4e-59 231.5 272 46.7
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 7.4e-59 231.5 272 46.7
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.3e-58 230.7 271 46.1
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 3.7e-58 229.2 269 44.6
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 3.7e-58 229.2 269 44.6
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 3.7e-58 229.2 273 46.5
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 4.8e-58 228.8 276 46.4
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 1.8e-57 226.9 250 45.6
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 1.8e-57 226.9 273 45.4
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 1.8e-57 226.9 269 47.2
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 6.9e-57 224.9 266 45.9
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 1.2e-56 224.2 250 47.6
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 2.0e-56 223.4 235 48.5
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 2.6e-56 223.0 274 45.6
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 3.4e-56 222.6 251 45.8
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 5.9e-56 221.9 235 46.4
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 1.0e-55 221.1 273 46.5
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 1.0e-55 221.1 271 47.2
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 1.0e-55 221.1 273 44.3
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 1.3e-55 220.7 264 46.2
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 1.3e-55 220.7 273 44.0
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 2.2e-55 219.9 273 45.4
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 2.9e-55 219.5 269 43.5
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 2.9e-55 219.5 270 44.8
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 5.0e-55 218.8 236 47.0
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 5.0e-55 218.8 273 45.8
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 6.5e-55 218.4 270 44.4
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 6.5e-55 218.4 275 45.1
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 6.5e-55 218.4 235 46.0
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 6.5e-55 218.4 236 47.0
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 8.5e-55 218.0 271 43.9
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 1.1e-54 217.6 271 45.4
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 1.1e-54 217.6 278 45.0
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.1e-54 217.6 273 45.1
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 3.2e-54 216.1 274 42.0
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 3.2e-54 216.1 268 44.4
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 4.2e-54 215.7 235 46.4
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 5.5e-54 215.3 273 44.7
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 5.5e-54 215.3 272 45.6
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 5.5e-54 215.3 273 44.3
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 7.2e-54 214.9 236 46.6
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 9.4e-54 214.5 268 44.0
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 2.1e-53 213.4 272 43.8
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 2.7e-53 213.0 275 44.7
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 4.7e-53 212.2 268 44.8
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 4.7e-53 212.2 236 46.6
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 7.9e-53 211.5 235 47.7
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 7.9e-53 211.5 271 42.4
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 1.4e-52 210.7 236 46.6
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 1.8e-52 210.3 273 43.2
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 2.3e-52 209.9 274 42.3
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 3.0e-52 209.5 274 43.4
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 6.7e-52 208.4 271 41.0
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 1.1e-51 207.6 267 43.1
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 2.6e-51 206.5 274 42.3
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 4.4e-51 205.7 264 42.0
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 7.4e-51 204.9 273 39.6
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 7.4e-51 204.9 273 42.9
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 1.3e-50 204.1 280 42.9
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 1.3e-50 204.1 253 45.1
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.7e-50 203.8 274 42.3
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.7e-50 203.8 273 41.0
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 6.3e-50 201.8 232 46.6
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 6.3e-50 201.8 273 41.0
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 8.2e-50 201.4 274 40.9
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 1.4e-49 200.7 274 39.1
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.4e-49 200.7 262 43.1
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 1.8e-49 200.3 265 41.5
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 1.8e-49 200.3 271 42.4
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 7.0e-49 198.4 276 42.0
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 7.0e-49 198.4 276 42.0
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 1.2e-48 197.6 276 41.7
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 7.7e-48 194.9 278 41.4
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 7.7e-48 194.9 278 41.4
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 2.2e-47 193.4 219 46.6
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.0e-44 184.5 107 85.0
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 5.2e-44 182.2 203 48.3
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 2.2e-42 176.8 248 42.3
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 1.4e-41 174.1 183 48.6
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 4.1e-41 172.6 269 40.9
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 2.9e-39 166.4 252 39.7
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 3.8e-39 166.0 276 38.4
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 1.5e-38 164.1 276 38.0
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 1.9e-38 163.7 266 38.3
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 1.6e-37 160.6 267 37.8
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 1.8e-36 157.1 260 37.3
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 1.8e-36 157.1 260 37.3
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 3.0e-36 156.4 245 39.2
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 2.0e-35 153.7 234 37.6
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 2.6e-35 153.3 234 38.5
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 1.7e-34 150.6 241 34.9
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 3.7e-34 149.4 234 38.0
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 9.1e-33 144.8 245 36.7
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 5.9e-32 142.1 221 36.7
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 1.7e-31 140.6 240 35.4
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 3.6e-29 132.9 221 34.8
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 4.7e-29 132.5 226 35.8
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 8.9e-28 128.3 235 35.3
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 1.5e-27 127.5 236 34.7
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 3.1e-25 119.8 164 41.5
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 1.2e-24 117.9 195 35.4
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 1.2e-24 117.9 245 31.4
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 1.6e-24 117.5 195 35.4
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 2.8e-21 106.7 224 33.0
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 1.3e-18 97.8 219 32.9
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 5.4e-17 92.4 90 47.8
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 1.6e-13 80.9 218 29.8
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 1.6e-13 80.9 99 41.4
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 2.8e-13 80.1 85 45.9
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 6.2e-13 79.0 108 40.7
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 1.1e-06 58.2 47 55.3


User provided reference genes

Program Settings