Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0716G068 Amborella trichopoda HOM05D009392 ORTHO05D012298 4.3e-144 514.6 253 100.0
ATR0686G053 Amborella trichopoda HOM05D009392 ORTHO05D012298 1.4e-49 200.7 212 55.2
ATR0177G019 Amborella trichopoda HOM05D009392 ORTHO05D011301 2.0e-48 196.8 200 55.0
ATR0620G144 Amborella trichopoda HOM05D009392 ORTHO05D012298 6.6e-44 181.8 271 40.2
ATR0776G005 Amborella trichopoda HOM05D009392 ORTHO05D012298 6.1e-42 175.3 248 44.8
ATR0745G057 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.5e-35 154.1 127 62.2
ATR1133G058 Amborella trichopoda HOM05D000176 ORTHO05D000106 1.2e-32 144.4 242 39.7
ATR0322G026 Amborella trichopoda HOM05D009392 ORTHO05D012298 1.6e-29 134.0 140 53.6
ATR0602G081 Amborella trichopoda HOM05D009392 ORTHO05D012298 7.8e-29 131.7 222 41.0
ATR0030G016 Amborella trichopoda HOM05D009392 ORTHO05D011301 2.5e-27 126.7 115 57.4
ATR0787G001 Amborella trichopoda HOM05D009392 ORTHO05D000106 4.3e-27 125.9 201 41.8
ATR0807G189 Amborella trichopoda HOM05D009392 ORTHO05D012298 1.6e-26 124.0 135 50.4
ATR0605G002 Amborella trichopoda HOM05D000176 ORTHO05D000106 4.7e-26 122.5 113 54.9
ATR0598G098 Amborella trichopoda HOM05D009392 ORTHO05D012298 8.9e-25 118.2 83 69.9
ATR0745G051 Amborella trichopoda HOM05D009392 ORTHO05D012298 1.4e-22 110.9 74 75.7
ATR0767G195 Amborella trichopoda HOM05D009392 ORTHO05D012298 1.2e-21 107.8 177 39.0
ATR0782G155 Amborella trichopoda HOM05D009392 ORTHO05D012298 3.5e-21 106.3 84 63.1
ATR0329G034 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.1e-19 101.3 125 50.4
ATR0800G048 Amborella trichopoda HOM05D009392 ORTHO05D012298 1.9e-19 100.5 56 89.3
ATR0618G361 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.3e-15 87.8 109 46.8
ATR0620G119 Amborella trichopoda HOM05D000176 ORTHO05D000106 2.2e-15 87.0 92 54.3
ATR0661G526 Amborella trichopoda HOM05D009392 ORTHO05D012298 2.9e-15 86.7 57 77.2
ATR0804G046 Amborella trichopoda HOM05D007095 ORTHO05D000106 4.9e-15 85.9 108 48.1
ATR0782G156 Amborella trichopoda HOM05D007095 ORTHO05D008898 4.1e-14 82.8 109 45.9
ATR1100G019 Amborella trichopoda HOM05D009392 ORTHO05D012298 1.7e-12 77.4 161 32.9
ATR0314G020 Amborella trichopoda HOM05D007095 ORTHO05D008898 3.0e-12 76.6 129 41.1
ATR0661G500 Amborella trichopoda HOM05D007095 ORTHO05D008898 3.0e-12 76.6 99 47.5
ATR0706G186 Amborella trichopoda HOM05D000176 ORTHO05D000106 3.9e-12 76.3 46 76.1
ATR0691G004 Amborella trichopoda HOM05D007095 ORTHO05D000106 8.7e-12 75.1 235 31.1
ATR0149G004 Amborella trichopoda HOM05D000176 ORTHO05D011301 1.1e-11 74.7 172 36.0
ATR0751G178 Amborella trichopoda HOM05D009392 ORTHO05D012298 4.3e-11 72.8 67 58.2
ATR0147G006 Amborella trichopoda HOM05D000176 ORTHO05D011301 2.8e-10 70.1 166 36.1
ATR0736G186 Amborella trichopoda HOM05D000176 ORTHO05D011301 4.7e-10 69.3 155 36.1
ATR0213G002 Amborella trichopoda HOM05D000176 ORTHO05D011301 6.2e-10 68.9 86 41.9
ATR0594G036 Amborella trichopoda HOM05D009392 ORTHO05D012298 8.1e-10 68.6 39 79.5
ATR0752G076 Amborella trichopoda HOM05D009392 ORTHO05D012298 1.8e-09 67.4 53 64.2
ATR0721G020 Amborella trichopoda HOM05D009392 ORTHO05D012298 5.2e-09 65.9 64 57.8
ATR0033G029 Amborella trichopoda HOM05D000176 ORTHO05D011301 6.9e-09 65.5 136 41.9
ATR0584G287 Amborella trichopoda HOM05D001245 ORTHO05D005230 9.0e-09 65.1 71 45.1
ATR0824G066 Amborella trichopoda HOM05D009392 ORTHO05D000106 1.5e-08 64.3 47 72.3
ATR0171G045 Amborella trichopoda HOM05D007095 ORTHO05D008898 4.4e-08 62.8 150 35.3
ATR0827G097 Amborella trichopoda HOM05D000176 ORTHO05D011301 4.4e-08 62.8 46 65.2
ATR0598G252 Amborella trichopoda HOM05D007095 ORTHO05D008898 9.9e-08 61.6 109 38.5
Ciclev10025397m.g Citrus clementina HOM05D000176 ORTHO05D000106 9.9e-08 61.6 205 27.3
ATR0752G177 Amborella trichopoda HOM05D000176 ORTHO05D000106 1.7e-07 60.8 160 30.6
MSTRG.10797 Avicennia marina HOM05D000176 ORTHO05D000106 2.9e-07 60.1 218 27.5
CSS0038560 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.9e-07 60.1 103 35.9
CSS0010546 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.8e-07 59.7 108 33.3
CSS0024646 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.8e-07 59.7 103 35.0
ATR0605G317 Amborella trichopoda HOM05D007095 ORTHO05D008898 4.9e-07 59.3 87 43.7
CSS0049971 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.9e-07 59.3 103 35.9
Migut.K00126 Erythranthe guttata HOM05D000176 ORTHO05D000106 6.4e-07 58.9 215 27.0
CSS0018283 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.4e-07 58.5 103 34.0
ATR0322G025 Amborella trichopoda HOM05D000176 ORTHO05D000106 1.1e-06 58.2 87 39.1
CSS0009485 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.1e-06 58.2 103 35.0
ATR0594G092 Amborella trichopoda HOM05D009392 ORTHO05D012298 1.4e-06 57.8 36 75.0
Lj3g0023710 Lotus japonicus HOM05D000176 ORTHO05D000106 1.4e-06 57.8 213 27.2
Aa31sc575G20 Aethionema arabicum HOM05D000176 ORTHO05D000106 1.9e-06 57.4 176 30.7
ATR0807G030 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.9e-06 57.4 61 50.8
Cc11_g07930 Coffea canephora HOM05D000176 ORTHO05D000106 4.2e-06 56.2 107 30.8
Solyc11g044453.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 5.4e-06 55.8 103 35.0
ATR0317G020 Amborella trichopoda HOM05D007095 ORTHO05D008898 7.1e-06 55.5 96 38.5
arahy.Tifrunner.gnm1.ann1.PINR01 Arachis hypogaea HOM05D000176 ORTHO05D000106 7.1e-06 55.5 201 26.4
ATR0598G009 Amborella trichopoda HOM05D007095 ORTHO05D008898 9.3e-06 55.1 170 28.8
ATR0776G028 Amborella trichopoda HOM05D000176 ORTHO05D011301 9.3e-06 55.1 139 36.7
CsaV3_5G025870 Cucumis sativus L. HOM05D000176 ORTHO05D000106 9.3e-06 55.1 206 27.7


User provided reference genes

Program Settings