Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 7.8e-61 236.9 115 100.0
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 1.5e-16 89.7 89 51.7
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 7.7e-16 87.4 85 51.8
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 7.7e-16 87.4 85 51.8
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 7.7e-16 87.4 82 53.7
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.0e-15 87.0 85 51.8
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.0e-15 87.0 85 51.8
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 1.7e-15 86.3 78 56.4
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 2.9e-15 85.5 77 54.5
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 3.8e-15 85.1 79 53.2
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 8.5e-15 84.0 80 51.2
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 1.4e-14 83.2 86 48.8
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 1.9e-14 82.8 75 56.0
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 1.9e-14 82.8 79 53.2
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 5.5e-14 81.3 79 53.2
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 9.4e-14 80.5 74 55.4
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 1.2e-13 80.1 74 56.8
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 2.7e-13 79.0 74 56.8
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 2.7e-13 79.0 87 48.3
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 2.7e-13 79.0 79 48.1
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 3.6e-13 78.6 95 46.3
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 3.6e-13 78.6 74 52.7
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 3.6e-13 78.6 79 48.1
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 4.6e-13 78.2 75 54.7
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 7.9e-13 77.4 77 51.9
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 1.0e-12 77.0 74 54.1
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 1.0e-12 77.0 95 43.2
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 1.0e-12 77.0 75 56.0
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 1.0e-12 77.0 73 57.5
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 2.3e-12 75.9 101 43.6
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 2.3e-12 75.9 75 54.7
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 3.0e-12 75.5 82 46.3
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 3.9e-12 75.1 78 46.2
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 3.9e-12 75.1 97 44.3
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 5.1e-12 74.7 75 53.3
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 5.1e-12 74.7 74 50.0
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 6.7e-12 74.3 75 48.0
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 8.8e-12 73.9 74 47.3
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 8.8e-12 73.9 87 44.8
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 1.5e-11 73.2 75 46.7
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 1.5e-11 73.2 78 48.7
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 1.5e-11 73.2 80 48.8
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 2.0e-11 72.8 89 46.1
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 2.0e-11 72.8 78 48.7
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 3.3e-11 72.0 76 52.6
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 4.3e-11 71.6 87 42.5
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 4.3e-11 71.6 87 42.5
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 4.3e-11 71.6 75 48.0
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 5.7e-11 71.2 90 44.4
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 5.7e-11 71.2 90 44.4
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 5.7e-11 71.2 74 47.3
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 7.4e-11 70.9 76 47.4
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 9.7e-11 70.5 77 49.4
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 1.3e-10 70.1 89 48.3
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 1.7e-10 69.7 89 40.4
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 1.7e-10 69.7 90 43.3
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 1.7e-10 69.7 85 45.9
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 2.2e-10 69.3 74 45.9
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 2.8e-10 68.9 77 46.8
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 2.8e-10 68.9 68 48.5
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 3.7e-10 68.6 74 47.3
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 3.7e-10 68.6 83 43.4
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 6.3e-10 67.8 82 48.8
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 6.3e-10 67.8 74 50.0
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 8.2e-10 67.4 74 41.9
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 1.1e-09 67.0 76 44.7
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 1.1e-09 67.0 73 46.6
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 1.1e-09 67.0 74 44.6
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 1.1e-09 67.0 74 47.3
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 1.8e-09 66.2 74 45.9
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 2.4e-09 65.9 82 43.9
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 2.4e-09 65.9 82 43.9
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 2.4e-09 65.9 74 45.9
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 4.1e-09 65.1 74 43.2
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 6.9e-09 64.3 83 41.0
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 9.1e-09 63.9 95 40.0
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 1.2e-08 63.5 91 34.1
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 1.5e-08 63.2 83 43.4
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 2.0e-08 62.8 83 44.6
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 2.6e-08 62.4 83 44.6
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 2.6e-08 62.4 78 46.2
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 2.6e-08 62.4 78 46.2
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 3.4e-08 62.0 81 44.4
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 3.4e-08 62.0 81 42.0
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 4.5e-08 61.6 74 43.2
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 1.0e-07 60.5 78 44.9
SEGI_11751 Sequoiadendron giganteum HOM05D007246 ORTHO05D009066 1.0e-07 60.5 88 33.0
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 1.3e-07 60.1 81 40.7
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 1.3e-07 60.1 81 40.7
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 1.3e-07 60.1 81 40.7
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 2.9e-07 58.9 81 40.7
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 2.9e-07 58.9 92 37.0
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 3.8e-07 58.5 81 39.5
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 3.8e-07 58.5 81 39.5
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 1.1e-06 57.0 81 40.7
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 1.1e-06 57.0 81 39.5


User provided reference genes

Program Settings