Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0716G008 Amborella trichopoda HOM05D007812 ORTHO05D009912 1.8e-20 102.1 67 100.0
Ah.08g216270 Amaranthus hybridus HOM05D007812 ORTHO05D009912 2.1e-10 68.6 67 70.1
TPR.G19291 Trifolium pratense HOM05D007812 ORTHO05D009912 5.3e-09 63.9 67 64.2
Cfa003579 Carpinus fangiana HOM05D007812 ORTHO05D009912 9.0e-09 63.2 62 64.5
PSO210G6368 Papaver somniferum HOM05D007812 ORTHO05D009912 1.5e-08 62.4 67 68.7
Zm00001eb270650 Zea mays HOM05D007812 ORTHO05D009912 2.0e-08 62.0 67 59.7
CiPaw.02G139600 Carya illinoinensis HOM05D007812 ORTHO05D009912 2.6e-08 61.6 62 61.3
Cpa.g.sc25.43 Carica papaya HOM05D007812 ORTHO05D009912 3.4e-08 61.2 65 58.5
MBI01_g09945_MAGBIO Magnolia biondii HOM05D007812 ORTHO05D009912 3.4e-08 61.2 62 58.1
Potri.001G196150 Populus trichocarpa HOM05D007812 ORTHO05D009912 3.4e-08 61.2 59 64.4
SalBow7G0845 Salvia bowleyana HOM05D007812 ORTHO05D009912 3.4e-08 61.2 67 65.7
Lj3g0001021 Lotus japonicus HOM05D007812 ORTHO05D009912 4.5e-08 60.8 67 65.7
PGR102G2903 Punica granatum HOM05D007812 ORTHO05D009912 4.5e-08 60.8 57 61.4
Hma1.2p1_0496F.1_g165840 Hydrangea macrophylla HOM05D007812 ORTHO05D009912 5.8e-08 60.5 65 56.9
TWI31G1317 Tripterygium wilfordii HOM05D007812 ORTHO05D009912 5.8e-08 60.5 60 70.0
Sed0004047 Sechium edule HOM05D007812 ORTHO05D009912 7.6e-08 60.1 41 82.9
Medtr8g017190 Medicago truncatula HOM05D007812 ORTHO05D009912 1.0e-07 59.7 67 62.7
QL05p012120 Quercus lobata HOM05D007812 ORTHO05D009912 1.0e-07 59.7 42 81.0
Manes.11G025800 Manihot esculenta HOM05D007812 ORTHO05D009912 1.3e-07 59.3 60 60.0
Hund18713 Selenicereus undatus HOM05D007812 ORTHO05D009912 1.3e-07 59.3 67 61.2
Lalb_Chr04g0263241 Lupinus albus HOM05D007812 ORTHO05D009912 1.7e-07 58.9 67 64.2
Sc15g0000160 Simmondsia chinensis HOM05D007812 ORTHO05D009912 1.7e-07 58.9 62 69.4
COL.COLO4_30669 Corchorus olitorius HOM05D007812 ORTHO05D009912 2.9e-07 58.2 67 64.2
Haze_15960 Corylus avellana HOM05D007812 ORTHO05D009912 2.9e-07 58.2 62 66.1
Phvul.010G138300 Phaseolus vulgaris HOM05D007812 ORTHO05D009912 2.9e-07 58.2 67 61.2
Sabra03G0024000 Salix brachista HOM05D007812 ORTHO05D009912 2.9e-07 58.2 60 61.7
arahy.Tifrunner.gnm1.ann1.4U9STT Arachis hypogaea HOM05D007812 ORTHO05D009912 3.8e-07 57.8 67 61.2
BcaB06g25431 Brassica carinata HOM05D007812 ORTHO05D009912 4.9e-07 57.4 59 59.3
A05p35560 Brassica napus HOM05D007812 ORTHO05D009912 4.9e-07 57.4 59 59.3
C05p53950 Brassica napus HOM05D007812 ORTHO05D009912 4.9e-07 57.4 59 59.3
BolC5t34061H Brassica oleracea HOM05D007812 ORTHO05D009912 4.9e-07 57.4 59 59.3
BraA05t22365Z Brassica rapa HOM05D007812 ORTHO05D009912 4.9e-07 57.4 59 59.3
Nitab4.5_0000174g0150 Nicotiana tabacum HOM05D007812 ORTHO05D009912 6.5e-07 57.0 54 72.2
Nitab4.5_0001087g0010 Nicotiana tabacum HOM05D007812 ORTHO05D009912 6.5e-07 57.0 54 72.2
Potri.003G037100 Populus trichocarpa HOM05D007812 ORTHO05D009912 6.5e-07 57.0 65 63.1
Ca_23324_v3 Cicer arietinum L. HOM05D007812 ORTHO05D009912 8.4e-07 56.6 67 58.2
Cc04_g01890 Coffea canephora HOM05D007812 ORTHO05D009912 8.4e-07 56.6 67 64.2
Thhalv10021887m.g Eutrema salsugineum HOM05D007812 ORTHO05D009912 8.4e-07 56.6 64 57.8
CSS0045617 Camellia sinensis var. sinensis HOM05D007812 ORTHO05D009912 1.1e-06 56.2 51 64.7
CARHR088620 Cardamine hirsuta HOM05D007812 ORTHO05D009912 1.4e-06 55.8 66 54.5
Migut.D00965 Erythranthe guttata HOM05D007812 ORTHO05D009912 1.9e-06 55.5 62 61.3
Nn8g38844 Nelumbo nucifera HOM05D007812 ORTHO05D009912 1.9e-06 55.5 62 64.5
Psat4g188240 Pisum sativum HOM05D007812 ORTHO05D009912 1.9e-06 55.5 54 74.1
Sp3g12050 Schrenkiella parvula HOM05D007812 ORTHO05D009912 1.9e-06 55.5 54 61.1
THA.LOC104822637 Tarenaya hassleriana HOM05D007812 ORTHO05D009912 1.9e-06 55.5 59 67.8
DCAR_016154 Daucus carota HOM05D007812 ORTHO05D009912 2.5e-06 55.1 62 56.5
Ah.03g142930 Amaranthus hybridus HOM05D007812 ORTHO05D009912 4.2e-06 54.3 54 59.3
Nitab4.5_0000255g0170 Nicotiana tabacum HOM05D007812 ORTHO05D009912 5.5e-06 53.9 67 53.7
Atru.chr1.3756 Acer truncatum HOM05D007812 ORTHO05D009912 7.1e-06 53.5 62 56.5
arahy.Tifrunner.gnm1.ann1.X39S4K Arachis hypogaea HOM05D007812 ORTHO05D009912 7.1e-06 53.5 67 58.2
Carub.0003s1338 Capsella rubella HOM05D007812 ORTHO05D009912 7.1e-06 53.5 65 55.4
PGSC0003DMG400024854 Solanum tuberosum HOM05D007812 ORTHO05D009912 9.3e-06 53.1 54 68.5


User provided reference genes

Program Settings