Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0712G102 Amborella trichopoda HOM05D006660 ORTHO05D008184 2.2e-111 405.6 197 100.0
Haze_12725 Corylus avellana HOM05D006660 ORTHO05D008184 1.6e-61 240.0 161 68.9
Dinv07831 Davidia involucrata HOM05D006660 ORTHO05D008184 1.6e-61 240.0 142 76.8
Nn1g07385 Nelumbo nucifera HOM05D006660 ORTHO05D008184 2.1e-61 239.6 145 75.9
HPP92_017850 Vanilla planifolia HOM05D006660 ORTHO05D008184 2.7e-61 239.2 144 75.0
PGR142G4370 Punica granatum HOM05D006660 ORTHO05D008184 7.8e-61 237.7 146 74.0
Potri.014G163200 Populus trichocarpa HOM05D006660 ORTHO05D008184 1.3e-60 236.9 144 75.7
Manes.12G060700 Manihot esculenta HOM05D006660 ORTHO05D008184 3.9e-60 235.3 154 72.7
CSS0034515 Camellia sinensis var. sinensis HOM05D006660 ORTHO05D008184 6.6e-60 234.6 137 78.8
MD17G1109800 Malus domestica HOM05D006660 ORTHO05D008184 8.7e-60 234.2 141 75.9
Oeu040482.1 Olea europaea HOM05D006660 ORTHO05D008184 8.7e-60 234.2 163 70.6
TWI36G0095 Tripterygium wilfordii HOM05D006660 ORTHO05D008184 8.7e-60 234.2 140 75.7
Lj8A132T54 Lonicera japonica HOM05D006660 ORTHO05D008184 1.9e-59 233.0 141 75.9
Thhalv10002462m.g Eutrema salsugineum HOM05D006660 ORTHO05D008184 3.3e-59 232.3 167 64.7
Sabra14G0124600 Salix brachista HOM05D006660 ORTHO05D008184 7.3e-59 231.1 144 74.3
CAN.G784.8 Capsicum annuum HOM05D006660 ORTHO05D008184 1.3e-58 230.3 147 73.5
Nitab4.5_0008746g0020 Nicotiana tabacum HOM05D006660 ORTHO05D008184 1.3e-58 230.3 132 80.3
RcHm_v2.0_Chr2g0157231 Rosa chinensis HOM05D006660 ORTHO05D008184 1.3e-58 230.3 136 77.2
FAN14G2696 Fragaria x ananassa HOM05D006660 ORTHO05D008184 1.6e-58 229.9 136 77.2
FAN14G4026 Fragaria x ananassa HOM05D006660 ORTHO05D008184 1.6e-58 229.9 136 77.2
Thecc.01G186300 Theobroma cacao HOM05D006660 ORTHO05D008184 1.6e-58 229.9 137 78.1
Actinidia10783 Actinidia chinensis HOM05D006660 ORTHO05D008184 2.1e-58 229.6 137 78.1
AUR62015095 Chenopodium quinoa HOM05D006660 ORTHO05D008184 2.1e-58 229.6 132 78.8
FAN05G5067 Fragaria x ananassa HOM05D006660 ORTHO05D008184 2.1e-58 229.6 147 73.5
Lsat_1_v5_gn_5_124741 Lactuca sativa HOM05D006660 ORTHO05D008184 2.8e-58 229.2 137 78.1
Rhsim04G0045800 Rhododendron simsii HOM05D006660 ORTHO05D008184 2.8e-58 229.2 136 76.5
CDE07G1994 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 3.6e-58 228.8 137 73.7
AUR62017555 Chenopodium quinoa HOM05D006660 ORTHO05D008184 3.6e-58 228.8 132 78.0
FAN02G1797 Fragaria x ananassa HOM05D006660 ORTHO05D008184 3.6e-58 228.8 136 77.2
Gorai.001G097700 Gossypium raimondii HOM05D006660 ORTHO05D008184 3.6e-58 228.8 132 81.1
Solyc07g049590.3 Solanum lycopersicum HOM05D006660 ORTHO05D008184 3.6e-58 228.8 132 78.8
PGSC0003DMG400006428 Solanum tuberosum HOM05D006660 ORTHO05D008184 3.6e-58 228.8 132 78.8
Aa31sc53G10 Aethionema arabicum HOM05D006660 ORTHO05D008184 4.8e-58 228.4 171 64.3
AT2G04740 Arabidopsis thaliana HOM05D006660 ORTHO05D008184 4.8e-58 228.4 137 75.2
CARHR102690 Cardamine hirsuta HOM05D006660 ORTHO05D008184 4.8e-58 228.4 142 73.9
Gohir.D07G091200 Gossypium hirsutum HOM05D006660 ORTHO05D008184 4.8e-58 228.4 132 81.1
Prupe.3G205300 Prunus persica HOM05D006660 ORTHO05D008184 6.2e-58 228.0 136 76.5
AL3G42350 Arabidopsis lyrata HOM05D006660 ORTHO05D008184 8.1e-58 227.6 137 75.2
MSTRG.14936 Avicennia marina HOM05D006660 ORTHO05D008184 8.1e-58 227.6 158 69.0
Eucgr.K00713 Eucalyptus grandis HOM05D006660 ORTHO05D008184 8.1e-58 227.6 148 70.9
FvH4_6g41550 Fragaria vesca HOM05D006660 ORTHO05D008184 8.1e-58 227.6 136 76.5
Gohir.A07G086100 Gossypium hirsutum HOM05D006660 ORTHO05D008184 8.1e-58 227.6 132 80.3
Atru.chr6.3318 Acer truncatum HOM05D006660 ORTHO05D008184 1.1e-57 227.3 136 80.1
Atru.chr6.3323 Acer truncatum HOM05D006660 ORTHO05D008184 1.1e-57 227.3 136 80.1
Ca_16352_v3 Cicer arietinum L. HOM05D006660 ORTHO05D008184 1.4e-57 226.9 147 74.1
Nitab4.5_0000130g0170 Nicotiana tabacum HOM05D006660 ORTHO05D008184 1.4e-57 226.9 132 78.8
Sopen07g024990 Solanum pennellii HOM05D006660 ORTHO05D008184 1.4e-57 226.9 132 78.0
Carub.0003s2635 Capsella rubella HOM05D006660 ORTHO05D008184 1.8e-57 226.5 137 74.5
BolC3t17779H Brassica oleracea HOM05D006660 ORTHO05D008184 2.4e-57 226.1 142 72.5
Sp3g23370 Schrenkiella parvula HOM05D006660 ORTHO05D008184 4.0e-57 225.3 152 69.1
BcaB08g34485 Brassica carinata HOM05D006660 ORTHO05D008184 5.3e-57 224.9 146 69.9
BcaC01g03192 Brassica carinata HOM05D006660 ORTHO05D008184 6.9e-57 224.6 142 72.5
A03p44410 Brassica napus HOM05D006660 ORTHO05D008184 6.9e-57 224.6 142 72.5
BraA03t13574Z Brassica rapa HOM05D006660 ORTHO05D008184 6.9e-57 224.6 142 72.5
Migut.M00006 Erythranthe guttata HOM05D006660 ORTHO05D008184 9.0e-57 224.2 128 79.7
Sc20g0003860 Simmondsia chinensis HOM05D006660 ORTHO05D008184 9.0e-57 224.2 136 76.5
Psat5g103920 Pisum sativum HOM05D006660 ORTHO05D008184 1.2e-56 223.8 129 79.8
THA.LOC104808860 Tarenaya hassleriana HOM05D006660 ORTHO05D008184 1.5e-56 223.4 131 77.9
TAR626G1025 Trochodendron aralioides HOM05D006660 ORTHO05D008184 1.5e-56 223.4 138 75.4
Ah.14g082930 Amaranthus hybridus HOM05D006660 ORTHO05D008184 2.0e-56 223.0 132 75.8
Aqoxy1G02841 Aquilegia oxysepala HOM05D006660 ORTHO05D008184 2.0e-56 223.0 144 72.9
C03p55040 Brassica napus HOM05D006660 ORTHO05D008184 2.0e-56 223.0 142 71.8
CiPaw.04G193900 Carya illinoinensis HOM05D006660 ORTHO05D008184 4.5e-56 221.9 134 74.6
PSO541G2904 Papaver somniferum HOM05D006660 ORTHO05D008184 5.8e-56 221.5 138 71.7
Sed0019714 Sechium edule HOM05D006660 ORTHO05D008184 5.8e-56 221.5 141 75.9
SGA_v2.0_scaffold73G24530 Striga asiatica HOM05D006660 ORTHO05D008184 9.9e-56 220.7 132 76.5
GSVIVG01030415001 Vitis vinifera HOM05D006660 ORTHO05D008184 9.9e-56 220.7 144 70.1
Medtr3g082870 Medicago truncatula HOM05D006660 ORTHO05D008184 1.3e-55 220.3 131 77.9
TPR.G22464 Trifolium pratense HOM05D006660 ORTHO05D008184 1.7e-55 219.9 117 85.5
SEGI_29705 Sequoiadendron giganteum HOM05D006660 ORTHO05D008184 2.2e-55 219.5 164 62.8
arahy.Tifrunner.gnm1.ann1.7S53TL Arachis hypogaea HOM05D006660 ORTHO05D008184 2.9e-55 219.2 130 79.2
arahy.Tifrunner.gnm1.ann1.GN08CG Arachis hypogaea HOM05D006660 ORTHO05D008184 2.9e-55 219.2 130 79.2
arahy.Tifrunner.gnm1.ann1.V90YU5 Arachis hypogaea HOM05D006660 ORTHO05D008184 2.9e-55 219.2 130 79.2
PSO675G7408 Papaver somniferum HOM05D006660 ORTHO05D008184 2.9e-55 219.2 138 71.0
CANSAT64G1453 Cannabis sativa HOM05D006660 ORTHO05D008184 3.8e-55 218.8 157 66.2
Cc10_g08860 Coffea canephora HOM05D006660 ORTHO05D008184 3.8e-55 218.8 132 75.8
Cpa.g.sc132.76 Carica papaya HOM05D006660 ORTHO05D008184 4.9e-55 218.4 147 69.4
DCAR_019721 Daucus carota HOM05D006660 ORTHO05D008184 8.4e-55 217.6 131 75.6
HanXRQChr10g0306331 Helianthus annuus HOM05D006660 ORTHO05D008184 1.1e-54 217.2 132 75.8
Phvul.004G085870 Phaseolus vulgaris HOM05D006660 ORTHO05D008184 1.9e-54 216.5 141 71.6
ECA234G1491 Erigeron canadensis HOM05D006660 ORTHO05D008184 2.7e-53 212.6 139 69.8
EL10Ac3g05658 Beta vulgaris HOM05D006660 ORTHO05D008184 6.0e-53 211.5 132 73.5
Ciclev10014722m.g Citrus clementina HOM05D006660 ORTHO05D008184 1.8e-52 209.9 141 70.9
Peaxi162Scf01333g00136 Petunia axillaris HOM05D006660 ORTHO05D008184 1.8e-52 209.9 133 74.4
VMungo1309G0792 Vigna mungo HOM05D006660 ORTHO05D008184 3.0e-52 209.1 111 83.8
Glyma.20G057100 Glycine max HOM05D006660 ORTHO05D008184 3.9e-52 208.8 124 75.8
Duzib133G0254 Durio zibethinus HOM05D006660 ORTHO05D008184 5.1e-52 208.4 137 72.3
ClCG02G009540 Citrullus lanatus HOM05D006660 ORTHO05D008184 1.5e-51 206.8 160 66.9
Mapoly0031s0110 Marchantia polymorpha HOM05D006660 ORTHO05D008184 1.9e-51 206.5 139 69.1
Zm00001eb281240 Zea mays HOM05D006660 ORTHO05D008184 3.3e-51 205.7 132 72.7
COL.COLO4_35986 Corchorus olitorius HOM05D006660 ORTHO05D008184 4.3e-51 205.3 144 67.4
CsaV3_2G034260 Cucumis sativus L. HOM05D006660 ORTHO05D008184 5.6e-51 204.9 142 70.4
MBI16_g31717_MAGBIO Magnolia biondii HOM05D006660 ORTHO05D008184 2.1e-50 203.0 137 68.6
MELO3C019360.2 Cucumis melo HOM05D006660 ORTHO05D008184 3.7e-50 202.2 135 71.9
Pp3c5_19510 Physcomitrium patens HOM05D006660 ORTHO05D008184 3.7e-50 202.2 134 68.7
Pp3c5_19514 Physcomitrium patens HOM05D006660 ORTHO05D008184 3.7e-50 202.2 134 68.7
FAN09G0285 Fragaria x ananassa HOM05D006660 ORTHO05D008184 1.4e-49 200.3 136 70.6
Os06g0318200 Oryza sativa ssp. japonica HOM05D006660 ORTHO05D008184 1.4e-49 200.3 125 73.6
AagrBONN_evm.TU.Sc2ySwM_344.2917 Anthoceros agrestis HOM05D006660 ORTHO05D008184 8.4e-47 191.0 134 67.2
SMO353G0185 Selaginella moellendorffii HOM05D006660 ORTHO05D008184 9.3e-46 187.6 133 67.7
Lj6g0000837 Lotus japonicus HOM05D006660 ORTHO05D008184 2.1e-45 186.4 117 75.2
CDE04G2012 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 3.0e-44 182.6 107 76.6
Lalb_Chr24g0402711 Lupinus albus HOM05D006660 ORTHO05D008184 2.5e-43 179.5 104 78.8
CBR_g47999 Chara braunii HOM05D006660 ORTHO05D008184 3.2e-38 162.5 107 67.3
vmacro09380 Vaccinium macrocarpon HOM05D006660 ORTHO05D008184 3.7e-26 122.5 137 48.9
AagrBONN_evm.TU.Sc2ySwM_228.2541 Anthoceros agrestis HOM05D006660 ORTHO05D008184 5.0e-23 112.1 174 42.5
Cfa027280 Carpinus fangiana HOM05D006660 ORTHO05D008184 2.4e-09 66.6 106 38.7


User provided reference genes

Program Settings