Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 2.6e-55 218.4 103 100.0
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 1.8e-40 169.1 105 75.2
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 6.8e-40 167.2 105 74.3
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 6.8e-40 167.2 106 75.5
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 1.5e-39 166.0 102 72.5
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 2.0e-39 165.6 99 74.7
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 2.0e-39 165.6 101 73.3
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 4.4e-39 164.5 99 75.8
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 5.8e-39 164.1 101 72.3
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 7.5e-39 163.7 102 72.5
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 7.5e-39 163.7 95 78.9
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 9.8e-39 163.3 95 76.8
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 9.8e-39 163.3 95 76.8
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.3e-38 162.9 94 79.8
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 2.2e-38 162.2 106 71.7
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 3.7e-38 161.4 102 70.6
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 3.7e-38 161.4 97 73.2
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 3.7e-38 161.4 103 69.9
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 6.4e-38 160.6 95 75.8
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 8.3e-38 160.2 99 73.7
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 8.3e-38 160.2 101 73.3
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 1.4e-37 159.5 95 75.8
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 1.4e-37 159.5 98 72.4
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.9e-37 159.1 98 71.4
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 2.4e-37 158.7 99 71.7
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 4.1e-37 157.9 98 70.4
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 4.1e-37 157.9 101 74.3
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 4.1e-37 157.9 99 70.7
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 5.4e-37 157.5 102 69.6
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 5.4e-37 157.5 102 69.6
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 7.0e-37 157.1 97 72.2
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 1.6e-36 156.0 101 67.3
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 2.7e-36 155.2 102 67.6
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 3.5e-36 154.8 92 72.8
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 4.6e-36 154.5 103 67.0
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 4.6e-36 154.5 100 65.0
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 7.8e-36 153.7 101 64.4
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 7.8e-36 153.7 98 70.4
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 7.8e-36 153.7 103 67.0
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 1.0e-35 153.3 102 67.6
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 1.0e-35 153.3 99 68.7
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 1.3e-35 152.9 100 66.0
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 1.7e-35 152.5 102 67.6
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 2.3e-35 152.1 115 63.5
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 3.9e-35 151.4 98 70.4
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 1.9e-34 149.1 97 67.0
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 2.5e-34 148.7 90 75.6
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 4.3e-34 147.9 94 70.2
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.2e-33 146.4 101 64.4
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.2e-33 146.4 101 64.4
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 1.2e-33 146.4 104 66.3
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 2.1e-33 145.6 94 66.0
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 2.1e-33 145.6 101 63.4
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 2.8e-33 145.2 95 67.4
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.8e-33 145.2 101 63.4
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 2.8e-33 145.2 99 65.7
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 6.2e-33 144.1 101 64.4
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 8.1e-33 143.7 103 63.1
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 8.1e-33 143.7 101 62.4
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.8e-32 142.5 101 63.4
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 2.3e-32 142.1 106 60.4
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 6.8e-32 140.6 102 64.7
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 6.8e-32 140.6 93 65.6
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 2.6e-31 138.7 93 65.6
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 3.4e-31 138.3 99 63.6
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 5.8e-31 137.5 101 65.3
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 7.5e-31 137.1 103 63.1
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.3e-30 136.3 93 64.5
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 1.7e-30 136.0 102 62.7
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.9e-30 135.2 101 59.4
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 3.7e-30 134.8 97 60.8
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 3.7e-30 134.8 97 60.8
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.9e-29 132.5 99 65.7
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.9e-29 132.5 105 59.0
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 2.4e-29 132.1 102 60.8
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 4.1e-29 131.3 98 61.2
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 7.1e-29 130.6 101 57.4
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 7.1e-29 130.6 79 69.6
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 9.2e-29 130.2 101 61.4
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 9.2e-29 130.2 92 62.0
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 9.2e-29 130.2 92 60.9
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 1.6e-28 129.4 101 58.4
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 2.1e-28 129.0 99 59.6
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 2.7e-28 128.6 98 59.2
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 4.6e-28 127.9 98 58.2
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 4.6e-28 127.9 75 73.3
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 1.0e-27 126.7 98 58.2
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.0e-27 126.7 75 72.0
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 1.7e-27 125.9 78 74.4
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 1.7e-27 125.9 79 68.4
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 2.3e-27 125.6 137 46.0
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 3.9e-27 124.8 88 61.4
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 5.1e-27 124.4 93 57.0
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 6.6e-27 124.0 115 52.2
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 6.6e-27 124.0 77 70.1
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 1.5e-26 122.9 115 51.3
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 1.5e-26 122.9 115 51.3
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 1.5e-26 122.9 78 70.5
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 2.5e-26 122.1 94 58.5
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 5.6e-26 120.9 92 56.5
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 2.1e-25 119.0 75 70.7
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 3.6e-25 118.2 78 71.8
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 3.6e-25 118.2 120 48.3
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 8.1e-25 117.1 78 65.4
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 1.1e-24 116.7 115 49.6
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.1e-24 116.7 78 65.4
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 1.8e-24 115.9 114 50.9
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 6.8e-24 114.0 120 46.7
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 8.9e-24 113.6 78 61.5
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 2.6e-23 112.1 97 47.4
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 5.8e-23 110.9 65 73.8
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 7.6e-23 110.5 78 62.8
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 3.8e-22 108.2 74 68.9
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 3.8e-22 108.2 73 65.8
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 4.9e-22 107.8 70 65.7
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.4e-21 106.3 58 82.8
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 2.4e-21 105.5 73 68.5
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 2.7e-20 102.1 64 67.2
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 6.6e-19 97.4 71 62.0
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 7.3e-18 94.0 77 54.5
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 6.2e-17 90.9 125 40.8
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 2.6e-15 85.5 97 39.2
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 1.7e-14 82.8 47 72.3
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 2.3e-11 72.4 50 66.0
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 2.3e-11 72.4 40 80.0
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 1.1e-10 70.1 100 32.0
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 2.4e-08 62.4 52 57.7
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 1.7e-06 56.2 40 57.5


User provided reference genes

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