Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 4.3e-107 391.3 198 100.0
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 2.5e-75 285.8 194 71.1
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.3e-71 273.5 195 67.7
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 1.3e-71 273.5 193 68.4
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 1.3e-71 273.5 195 68.2
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 2.9e-71 272.3 194 67.5
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 4.9e-71 271.6 195 66.7
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 1.1e-70 270.4 188 68.1
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 1.1e-70 270.4 195 67.2
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 5.5e-70 268.1 195 65.1
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 5.5e-70 268.1 189 68.8
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 7.1e-70 267.7 189 67.2
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 1.6e-69 266.5 194 67.0
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 1.6e-69 266.5 196 66.3
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 1.6e-69 266.5 193 65.8
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 2.7e-69 265.8 190 68.4
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 2.7e-69 265.8 194 66.0
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 2.7e-69 265.8 190 66.8
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 4.6e-69 265.0 194 64.4
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 7.9e-69 264.2 192 65.6
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 7.9e-69 264.2 195 66.2
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 1.0e-68 263.8 196 65.8
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 1.0e-68 263.8 192 66.7
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 2.3e-68 262.7 192 66.1
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 3.0e-68 262.3 194 66.5
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 8.7e-68 260.8 194 66.0
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 1.1e-67 260.4 177 69.5
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 1.1e-67 260.4 196 64.8
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 1.9e-67 259.6 194 64.4
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 1.9e-67 259.6 193 64.8
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 1.9e-67 259.6 194 63.9
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 2.5e-67 259.2 194 64.9
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 3.3e-67 258.8 194 66.0
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 3.3e-67 258.8 196 65.3
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 4.3e-67 258.5 194 65.5
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 4.3e-67 258.5 194 63.9
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 4.3e-67 258.5 177 69.5
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 4.3e-67 258.5 194 63.9
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 4.3e-67 258.5 195 63.6
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 5.6e-67 258.1 192 65.6
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 7.4e-67 257.7 196 65.8
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 2.1e-66 256.1 194 64.4
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 2.8e-66 255.8 196 64.3
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.8e-66 255.8 195 64.6
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 3.7e-66 255.4 190 65.8
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 3.7e-66 255.4 194 66.0
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 4.8e-66 255.0 194 64.9
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 4.8e-66 255.0 191 67.5
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 6.2e-66 254.6 192 63.0
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 6.2e-66 254.6 194 63.4
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 1.4e-65 253.4 194 64.4
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 2.4e-65 252.7 169 72.8
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 4.0e-65 251.9 195 63.1
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 5.3e-65 251.5 193 65.3
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 1.5e-64 250.0 182 67.6
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 3.4e-64 248.8 184 66.8
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 5.8e-64 248.1 175 67.4
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 7.6e-64 247.7 170 68.8
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 8.4e-63 244.2 194 62.4
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 1.1e-62 243.8 195 61.5
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 1.4e-62 243.4 194 60.3
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 1.9e-62 243.0 189 63.5
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 3.2e-62 242.3 195 59.5
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 1.2e-61 240.4 191 61.3
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 1.0e-60 237.3 186 64.0
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 1.3e-60 236.9 196 60.7
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 1.3e-60 236.9 174 64.9
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 2.5e-59 232.6 154 70.8
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 3.1e-57 225.7 172 65.7
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 4.1e-57 225.3 182 62.6
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 5.3e-57 224.9 148 72.3
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 5.3e-57 224.9 185 62.2
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 5.3e-57 224.9 205 58.5
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 1.5e-56 223.4 141 75.2
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 4.5e-56 221.9 170 65.3
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 5.9e-56 221.5 255 48.6
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 1.2e-53 213.8 168 63.1
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 4.6e-53 211.8 143 68.5
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 3.0e-52 209.1 318 39.9
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 3.0e-52 209.1 318 39.9
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 1.5e-51 206.8 150 65.3
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 5.7e-51 204.9 172 57.6
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 7.4e-51 204.5 194 56.2
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.1e-49 200.7 200 54.0
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 1.8e-49 199.9 343 37.6
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 1.4e-46 190.3 169 54.4
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 5.1e-44 181.8 112 73.2
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 2.0e-43 179.9 192 50.0
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 3.1e-41 172.6 194 48.5
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 4.5e-40 168.7 136 62.5
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 6.5e-39 164.9 121 66.9
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 8.5e-39 164.5 135 57.8
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 2.1e-37 159.8 127 63.8
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 3.6e-37 159.1 137 60.6
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 2.0e-35 153.3 171 46.8
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 9.4e-30 134.4 277 32.5
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 1.1e-27 127.5 82 69.5
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 6.3e-26 121.7 229 38.4
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.2e-23 113.2 87 64.4
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 9.8e-19 97.8 85 62.4
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 2.4e-17 93.2 56 71.4
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 2.5e-14 83.2 129 38.8
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 5.5e-14 82.0 111 44.1
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 1.2e-13 80.9 164 34.1
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 4.0e-12 75.9 55 61.8
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 6.3e-10 68.6 61 57.4
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 4.1e-09 65.9 98 39.8
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 9.2e-09 64.7 58 53.4
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.7e-08 61.6 34 73.5
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 8.6e-07 58.2 49 61.2


User provided reference genes

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