Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0712G030 Amborella trichopoda HOM05D004836 ORTHO05D005150 0.0e+00 1384.0 717 100.0
ATR0751G141 Amborella trichopoda HOM05D004836 ORTHO05D005150 1.3e-259 899.8 845 62.2
TAR626G1210 Trochodendron aralioides HOM05D004836 ORTHO05D005150 4.2e-19 100.9 224 35.7
Oeu014362.2 Olea europaea HOM05D004836 ORTHO05D005150 5.6e-16 90.5 191 35.1
Oeu046935.1 Olea europaea HOM05D004836 ORTHO05D005150 4.8e-15 87.4 191 35.6
Manes.03G141700 Manihot esculenta HOM05D004836 ORTHO05D005150 1.2e-13 82.8 194 33.5
TAR624G0729 Trochodendron aralioides HOM05D004836 ORTHO05D005150 1.2e-13 82.8 333 30.3
GSVIVG01014692001 Vitis vinifera HOM05D004836 ORTHO05D005150 2.0e-13 82.0 203 33.5
MBI15_g03895_MAGBIO Magnolia biondii HOM05D004836 ORTHO05D005150 2.6e-13 81.6 557 24.1
Hund23108 Selenicereus undatus HOM05D004836 ORTHO05D005150 3.4e-13 81.3 208 33.7
Actinidia37154 Actinidia chinensis HOM05D004836 ORTHO05D005150 4.5e-13 80.9 196 33.2
Hund20644 Selenicereus undatus HOM05D004836 ORTHO05D005150 5.8e-13 80.5 206 31.1
CSS0029600 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 2.9e-12 78.2 495 25.1
Dinv10337 Davidia involucrata HOM05D004836 ORTHO05D005150 3.8e-12 77.8 221 31.2
Nitab4.5_0007415g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 3.8e-12 77.8 202 35.6
SGA_v2.0_scaffold171G38861 Striga asiatica HOM05D004836 ORTHO05D005150 4.9e-12 77.4 200 32.0
Nn1g03169 Nelumbo nucifera HOM05D004836 ORTHO05D005150 1.4e-11 75.9 600 24.3
Dinv40862 Davidia involucrata HOM05D004836 ORTHO05D005150 1.9e-11 75.5 207 30.9
Aqoxy4G02292 Aquilegia oxysepala HOM05D004836 ORTHO05D005150 2.5e-11 75.1 245 28.2
Nitab4.5_0002736g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 2.5e-11 75.1 202 34.7
Sc16g0008100 Simmondsia chinensis HOM05D004836 ORTHO05D005150 3.2e-11 74.7 194 30.9
TWI38G0981 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 3.2e-11 74.7 197 32.5
BcaB08g35940 Brassica carinata HOM05D004836 ORTHO05D005150 9.3e-11 73.2 95 43.2
Sc03g0011420 Simmondsia chinensis HOM05D004836 ORTHO05D005150 9.3e-11 73.2 188 32.4
Duzib213G0869 Durio zibethinus HOM05D004836 ORTHO05D005150 1.2e-10 72.8 177 36.7
TWI39G0173 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 4.6e-10 70.9 199 30.2
Rhsim04G0012500 Rhododendron simsii HOM05D004836 ORTHO05D005150 6.0e-10 70.5 230 28.7
Sopen07g033810 Solanum pennellii HOM05D004836 ORTHO05D005150 1.0e-09 69.7 226 29.6
Carub.0008s1617 Capsella rubella HOM05D004836 ORTHO05D005150 1.8e-09 68.9 98 40.8
CANSAT11G1576 Cannabis sativa HOM05D004836 ORTHO05D005150 2.3e-09 68.6 107 38.3
PSO541G5284 Papaver somniferum HOM05D004836 ORTHO05D005150 2.3e-09 68.6 86 46.5
AL8G31380 Arabidopsis lyrata HOM05D004836 ORTHO05D005150 3.9e-09 67.8 103 40.8
Peaxi162Scf00139g01321 Petunia axillaris HOM05D004836 ORTHO05D005150 5.1e-09 67.4 201 30.8
Actinidia05002 Actinidia chinensis HOM05D004836 ORTHO05D005150 6.7e-09 67.0 82 45.1
Sc03g0011330 Simmondsia chinensis HOM05D004836 ORTHO05D005150 6.7e-09 67.0 188 30.9
Thecc.07G013200 Theobroma cacao HOM05D004836 ORTHO05D005150 8.7e-09 66.6 175 36.6
Migut.M01650 Erythranthe guttata HOM05D004836 ORTHO05D005150 1.1e-08 66.2 90 46.7
Gorai.002G100500 Gossypium raimondii HOM05D004836 ORTHO05D005150 1.1e-08 66.2 345 26.1
SGA_v2.0_scaffold168G38564 Striga asiatica HOM05D004836 ORTHO05D005150 1.1e-08 66.2 212 29.2
Aa31LG3G11720 Aethionema arabicum HOM05D004836 ORTHO05D005150 1.5e-08 65.9 89 39.3
AT5G55820 Arabidopsis thaliana HOM05D004836 ORTHO05D005150 1.5e-08 65.9 98 39.8
EL10Ac4g07562 Beta vulgaris HOM05D004836 ORTHO05D005150 1.5e-08 65.9 92 40.2
Solyc07g065600.3 Solanum lycopersicum HOM05D004836 ORTHO05D005150 1.9e-08 65.5 226 29.2
CiPaw.11G204300 Carya illinoinensis HOM05D004836 ORTHO05D005150 2.5e-08 65.1 215 27.9
Lsat_1_v5_gn_9_90560 Lactuca sativa HOM05D004836 ORTHO05D005150 3.3e-08 64.7 429 24.9
Manes.15G059500 Manihot esculenta HOM05D004836 ORTHO05D005150 3.3e-08 64.7 183 31.1
PSO675G3612 Papaver somniferum HOM05D004836 ORTHO05D005150 3.3e-08 64.7 86 45.3
Sed0002835 Sechium edule HOM05D004836 ORTHO05D005150 4.3e-08 64.3 261 26.8
BolC3t14046H Brassica oleracea HOM05D004836 ORTHO05D005150 5.7e-08 63.9 99 39.4
AUR62036461 Chenopodium quinoa HOM05D004836 ORTHO05D005150 5.7e-08 63.9 276 24.6
AUR62044127 Chenopodium quinoa HOM05D004836 ORTHO05D005150 5.7e-08 63.9 276 24.6
BcaC01g06394 Brassica carinata HOM05D004836 ORTHO05D005150 7.4e-08 63.5 110 38.2
C03p16240 Brassica napus HOM05D004836 ORTHO05D005150 7.4e-08 63.5 110 38.2
DCAR_013235 Daucus carota HOM05D004836 ORTHO05D005150 7.4e-08 63.5 90 41.1
Atru.chr2.3693 Acer truncatum HOM05D004836 ORTHO05D005150 9.6e-08 63.2 194 29.9
Rhsim06G0230000 Rhododendron simsii HOM05D004836 ORTHO05D005150 1.3e-07 62.8 92 39.1
CANSAT35G0529 Cannabis sativa HOM05D004836 ORTHO05D005150 3.7e-07 61.2 107 33.6
PGR083G2228 Punica granatum HOM05D004836 ORTHO05D005150 3.7e-07 61.2 415 24.8
arahy.Tifrunner.gnm1.ann1.TB163P Arachis hypogaea HOM05D004836 ORTHO05D005150 4.8e-07 60.8 213 26.8
AUR62017108 Chenopodium quinoa HOM05D004836 ORTHO05D005150 4.8e-07 60.8 92 35.9
COL.COLO4_09837 Corchorus olitorius HOM05D004836 ORTHO05D005150 4.8e-07 60.8 184 32.6
arahy.Tifrunner.gnm1.ann1.D5NCPP Arachis hypogaea HOM05D004836 ORTHO05D005150 6.3e-07 60.5 213 27.7
Actinidia30401 Actinidia chinensis HOM05D004836 ORTHO05D005150 1.1e-06 59.7 67 47.8
CARHR269190 Cardamine hirsuta HOM05D004836 ORTHO05D005150 1.4e-06 59.3 271 25.8
Cc05_g14960 Coffea canephora HOM05D004836 ORTHO05D005150 1.4e-06 59.3 201 29.4
QL08p004015 Quercus lobata HOM05D004836 ORTHO05D005150 1.4e-06 59.3 425 26.4
Sabra16G0241300 Salix brachista HOM05D004836 ORTHO05D005150 1.8e-06 58.9 190 32.1
Ah.06g181450 Amaranthus hybridus HOM05D004836 ORTHO05D005150 2.4e-06 58.5 300 24.0
Gohir.D01G061900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 2.4e-06 58.5 345 24.9
CAN.G623.12 Capsicum annuum HOM05D004836 ORTHO05D005150 3.1e-06 58.2 226 28.8
unitig_22.g5946 Utricularia gibba HOM05D004836 ORTHO05D005150 3.1e-06 58.2 326 26.4
Phvul.007G023800 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 4.1e-06 57.8 187 27.3
CDE04G0223 Ceratophyllum demersum HOM05D000588 ORTHO05D005150 6.9e-06 57.0 111 32.4
CDE02G4444 Ceratophyllum demersum HOM05D004836 ORTHO05D005150 9.0e-06 56.6 167 28.7


User provided reference genes

Program Settings