Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 2.9e-81 305.1 141 100.0
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 6.7e-46 187.6 137 62.0
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 1.1e-45 186.8 140 63.6
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 7.4e-45 184.1 137 60.6
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 9.6e-45 183.7 141 58.9
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 6.2e-44 181.0 140 59.3
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 8.1e-44 180.6 141 57.4
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 1.1e-43 180.3 137 60.6
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 1.4e-43 179.9 139 58.3
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 1.4e-43 179.9 137 62.0
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 1.8e-43 179.5 140 59.3
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 1.8e-43 179.5 139 58.3
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 3.1e-43 178.7 141 56.0
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.1e-43 178.7 144 59.0
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 3.1e-43 178.7 139 59.0
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 3.1e-43 178.7 136 61.0
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 3.1e-43 178.7 141 58.2
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 5.3e-43 177.9 136 61.0
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 5.3e-43 177.9 136 55.9
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 5.3e-43 177.9 139 61.2
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 6.9e-43 177.6 146 54.8
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 6.9e-43 177.6 137 59.1
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.2e-42 176.8 141 56.7
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 5.8e-42 174.5 140 57.9
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 1.0e-41 173.7 141 57.4
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 1.0e-41 173.7 141 54.6
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.3e-41 173.3 143 57.3
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.3e-41 173.3 143 57.3
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.3e-41 173.3 143 57.3
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 1.3e-41 173.3 141 58.2
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.7e-41 172.9 141 56.7
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 2.9e-41 172.2 141 58.9
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 2.9e-41 172.2 140 57.1
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 2.9e-41 172.2 140 56.4
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 3.8e-41 171.8 139 59.7
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 4.9e-41 171.4 137 58.4
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 6.5e-41 171.0 140 57.1
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 6.5e-41 171.0 141 56.7
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 6.5e-41 171.0 141 56.7
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 6.5e-41 171.0 139 57.6
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 8.4e-41 170.6 142 57.0
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 8.4e-41 170.6 140 57.9
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 8.4e-41 170.6 140 55.7
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 1.1e-40 170.2 140 57.9
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 1.4e-40 169.9 140 57.1
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.4e-40 169.9 139 56.1
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 2.5e-40 169.1 136 58.1
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 3.2e-40 168.7 146 57.5
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 4.2e-40 168.3 139 57.6
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 5.5e-40 167.9 141 55.3
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 7.1e-40 167.5 137 54.7
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 2.1e-39 166.0 137 53.3
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 1.1e-37 160.2 151 55.0
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.1e-37 160.2 141 51.1
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 1.1e-37 160.2 138 54.3
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 1.5e-37 159.8 127 55.9
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 1.5e-37 159.8 138 51.4
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 2.5e-37 159.1 121 60.3
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 4.3e-37 158.3 141 51.1
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 5.7e-37 157.9 124 57.3
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 9.6e-37 157.1 141 51.8
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 9.6e-37 157.1 141 51.8
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 1.3e-36 156.8 141 52.5
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 1.3e-36 156.8 120 58.3
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 1.3e-36 156.8 122 56.6
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 2.1e-36 156.0 137 52.6
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 2.1e-36 156.0 141 48.9
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 4.8e-36 154.8 137 51.1
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 4.1e-35 151.8 123 56.1
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 4.1e-35 151.8 140 50.7
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 5.3e-35 151.4 137 52.6
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 2.0e-34 149.4 191 42.4
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 3.4e-34 148.7 125 55.2
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 3.8e-33 145.2 136 50.0
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 5.0e-33 144.8 136 50.0
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 2.5e-32 142.5 210 35.7
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 7.2e-32 141.0 136 48.5
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 2.1e-31 139.4 125 52.0
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 6.1e-31 137.9 128 50.0
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 6.1e-31 137.9 125 51.2
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 7.9e-31 137.5 144 49.3
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 2.3e-30 136.0 112 57.1
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.0e-30 135.6 141 48.2
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 8.7e-30 134.0 122 53.3
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 7.4e-29 131.0 120 51.7
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 1.3e-28 130.2 119 54.6
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 5.3e-27 124.8 96 57.3
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 4.5e-26 121.7 140 42.9
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 1.3e-25 120.2 140 45.0
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 1.7e-25 119.8 128 44.5
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 1.1e-24 117.1 137 39.4
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 2.8e-20 102.4 89 56.2
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 3.7e-20 102.1 90 51.1
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 4.8e-20 101.7 83 51.8
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 4.1e-19 98.6 129 40.3
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 3.4e-18 95.5 95 52.6
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 4.5e-18 95.1 130 38.5
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 1.3e-17 93.6 65 64.6
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 1.3e-17 93.6 76 56.6
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 3.8e-17 92.0 73 58.9
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 5.0e-17 91.7 86 48.8
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 8.5e-17 90.9 71 62.0
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 2.7e-15 85.9 71 59.2
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 4.7e-15 85.1 72 51.4
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 6.1e-15 84.7 72 55.6
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.1e-11 73.9 57 66.7
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 2.4e-11 72.8 108 37.0
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 3.6e-07 58.9 40 67.5
MCO03G224 Micromonas commoda HOM05D038107 ORTHO05D036800 6.1e-07 58.2 78 35.9
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 1.8e-06 56.6 36 66.7
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 6.7e-06 54.7 69 39.1


User provided reference genes

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