Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0706G219 Amborella trichopoda HOM05D008610 ORTHO05D010832 5.9e-118 427.6 219 100.0
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 2.1e-22 110.2 213 34.7
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 1.4e-21 107.5 217 34.1
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 1.2e-17 94.4 218 32.6
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 3.5e-17 92.8 216 30.6
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 1.0e-16 91.3 228 28.5
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 2.2e-16 90.1 219 33.3
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 6.5e-16 88.6 215 28.8
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 3.2e-15 86.3 218 30.7
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 3.6e-14 82.8 222 31.1
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 6.1e-14 82.0 203 30.0
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 6.8e-13 78.6 201 28.9
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 6.8e-13 78.6 160 33.8
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 6.8e-13 78.6 157 33.8
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 8.8e-13 78.2 149 33.6
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 2.0e-12 77.0 182 33.0
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 2.0e-12 77.0 166 33.1
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 5.7e-12 75.5 163 32.5
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 9.8e-12 74.7 224 29.9
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 1.7e-11 73.9 221 31.2
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 1.7e-11 73.9 228 26.8
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 8.3e-11 71.6 166 29.5
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 1.4e-10 70.9 160 28.1
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 1.8e-10 70.5 190 32.1
VMungo0251G1556 Vigna mungo HOM05D003014 ORTHO05D003233 1.8e-10 70.5 194 26.8
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 2.4e-10 70.1 146 31.5
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 5.4e-10 68.9 200 26.5
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 9.2e-10 68.2 160 30.6
Phvul.003G048100 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 2.7e-09 66.6 170 25.9
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 3.5e-09 66.2 139 29.5
Phvul.003G048000 Phaseolus vulgaris HOM05D003014 ORTHO05D003233 1.0e-08 64.7 205 24.9
QL02p004396 Quercus lobata HOM05D003014 ORTHO05D003233 1.0e-08 64.7 116 29.3
Glyma.02G103200 Glycine max HOM05D003014 ORTHO05D003233 3.8e-08 62.8 173 25.4
SGA_v2.0_scaffold57G20206 Striga asiatica HOM05D008610 ORTHO05D010832 6.6e-08 62.0 198 26.8
SalBow6G6778 Salvia bowleyana HOM05D003014 ORTHO05D003233 1.9e-07 60.5 116 27.6
PSO170G6844 Papaver somniferum HOM05D008610 ORTHO05D010832 2.5e-07 60.1 219 27.9
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 3.3e-07 59.7 227 26.9
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 3.3e-07 59.7 209 26.3
Manes.18G039500 Manihot esculenta HOM05D003014 ORTHO05D003233 3.3e-07 59.7 209 25.4
SalBow6G1753 Salvia bowleyana HOM05D003014 ORTHO05D003233 4.3e-07 59.3 152 27.0
Medtr4g081980 Medicago truncatula HOM05D003014 ORTHO05D003233 7.3e-07 58.5 202 27.7
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 7.3e-07 58.5 164 32.3
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 1.6e-06 57.4 216 25.0
PGSC0003DMG400025783 Solanum tuberosum HOM05D003014 ORTHO05D003233 2.1e-06 57.0 225 27.1
RcHm_v2.0_Chr6g0308241 Rosa chinensis HOM05D003014 ORTHO05D003233 3.6e-06 56.2 180 23.9
PGSC0003DMG400025780 Solanum tuberosum HOM05D003014 ORTHO05D003233 4.7e-06 55.8 228 25.9
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 8.0e-06 55.1 217 26.7
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 8.0e-06 55.1 133 27.8


User provided reference genes

Program Settings