Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0706G214 Amborella trichopoda HOM05D004591 ORTHO05D005749 9.4e-46 186.4 89 100.0
CANSAT78G2472 Cannabis sativa HOM05D004591 ORTHO05D005749 2.1e-37 158.7 83 88.0
Potri.010G022300 Populus trichocarpa HOM05D004591 ORTHO05D005749 2.1e-37 158.7 83 88.0
CSS0009969 Camellia sinensis var. sinensis HOM05D004591 ORTHO05D005749 2.7e-37 158.3 82 89.0
CSS0050493 Camellia sinensis var. sinensis HOM05D004591 ORTHO05D005749 2.7e-37 158.3 82 89.0
FvH4_4g17580 Fragaria vesca HOM05D004591 ORTHO05D005749 2.7e-37 158.3 82 87.8
FAN07G0597 Fragaria x ananassa HOM05D004591 ORTHO05D005749 2.7e-37 158.3 82 87.8
FAN12G0549 Fragaria x ananassa HOM05D004591 ORTHO05D005749 2.7e-37 158.3 82 87.8
FAN12G3150 Fragaria x ananassa HOM05D004591 ORTHO05D005749 2.7e-37 158.3 82 87.8
FAN17G1172 Fragaria x ananassa HOM05D004591 ORTHO05D005749 2.7e-37 158.3 82 87.8
Gohir.A10G161800 Gossypium hirsutum HOM05D004591 ORTHO05D005749 2.7e-37 158.3 82 87.8
MD16G1173200 Malus domestica HOM05D004591 ORTHO05D005749 2.7e-37 158.3 82 87.8
Nn4g25961 Nelumbo nucifera HOM05D004591 ORTHO05D005749 2.7e-37 158.3 82 89.0
Prupe.1G140000 Prunus persica HOM05D004591 ORTHO05D005749 2.7e-37 158.3 82 87.8
RcHm_v2.0_Chr4g0421481 Rosa chinensis HOM05D004591 ORTHO05D005749 2.7e-37 158.3 82 87.8
Cc03_g02140 Coffea canephora HOM05D004591 ORTHO05D005749 3.6e-37 157.9 81 88.9
Nn3g21355 Nelumbo nucifera HOM05D004591 ORTHO05D005749 3.6e-37 157.9 81 88.9
Potri.008G215300 Populus trichocarpa HOM05D004591 ORTHO05D005749 3.6e-37 157.9 83 88.0
SalBow3G4019 Salvia bowleyana HOM05D004591 ORTHO05D005749 3.6e-37 157.9 81 88.9
SGA_v2.0_scaffold43G16263 Striga asiatica HOM05D004591 ORTHO05D005749 3.6e-37 157.9 81 90.1
arahy.Tifrunner.gnm1.ann1.7AW5Q0 Arachis hypogaea HOM05D004591 ORTHO05D005749 4.7e-37 157.5 83 86.7
arahy.Tifrunner.gnm1.ann1.Q8N8UE Arachis hypogaea HOM05D004591 ORTHO05D005749 4.7e-37 157.5 83 86.7
Manes.03G192300 Manihot esculenta HOM05D004591 ORTHO05D005749 4.7e-37 157.5 83 86.7
Thecc.04G279900 Theobroma cacao HOM05D004591 ORTHO05D005749 4.7e-37 157.5 83 88.0
MBI18_g01976_MAGBIO Magnolia biondii HOM05D004591 ORTHO05D005749 6.1e-37 157.1 82 89.0
Sc25g0004740 Simmondsia chinensis HOM05D004591 ORTHO05D005749 6.1e-37 157.1 82 89.0
CDE12G0904 Ceratophyllum demersum HOM05D004591 ORTHO05D005749 8.0e-37 156.8 82 87.8
Duzib052G0124 Durio zibethinus HOM05D004591 ORTHO05D005749 8.0e-37 156.8 83 88.0
Migut.N01937 Erythranthe guttata HOM05D004591 ORTHO05D005749 8.0e-37 156.8 82 87.8
Hma1.2p1_0698F.1_g205415 Hydrangea macrophylla HOM05D004591 ORTHO05D005749 8.0e-37 156.8 82 87.8
Lj4g0005644 Lotus japonicus HOM05D004591 ORTHO05D005749 8.0e-37 156.8 83 86.7
Oeu062899.1 Olea europaea HOM05D004591 ORTHO05D005749 8.0e-37 156.8 81 87.7
PGR004G2200 Punica granatum HOM05D004591 ORTHO05D005749 8.0e-37 156.8 82 86.6
VMungo1215G2997 Vigna mungo HOM05D004591 ORTHO05D005749 8.0e-37 156.8 83 88.0
Actinidia01943 Actinidia chinensis HOM05D004591 ORTHO05D005749 1.0e-36 156.4 82 87.8
Actinidia40243 Actinidia chinensis HOM05D004591 ORTHO05D005749 1.0e-36 156.4 82 87.8
Ah.13g074560 Amaranthus hybridus HOM05D004591 ORTHO05D005749 1.0e-36 156.4 84 85.7
Sabra08G0155500 Salix brachista HOM05D004591 ORTHO05D005749 1.0e-36 156.4 83 86.7
TWI53G0054 Tripterygium wilfordii HOM05D004591 ORTHO05D005749 1.0e-36 156.4 82 85.4
TWI53G1348 Tripterygium wilfordii HOM05D004591 ORTHO05D005749 1.0e-36 156.4 82 85.4
DCAR_002455 Daucus carota HOM05D004591 ORTHO05D005749 1.4e-36 156.0 82 86.6
DCAR_002457 Daucus carota HOM05D004591 ORTHO05D005749 1.4e-36 156.0 82 86.6
HanXRQChr03g0080861 Helianthus annuus HOM05D004591 ORTHO05D005749 1.4e-36 156.0 82 86.6
PSO210G4745 Papaver somniferum HOM05D004591 ORTHO05D005749 1.4e-36 156.0 82 87.8
PSO832G1860 Papaver somniferum HOM05D004591 ORTHO05D005749 1.4e-36 156.0 82 87.8
Psat4g047160 Pisum sativum HOM05D004591 ORTHO05D005749 1.4e-36 156.0 83 86.7
Aqoxy2G03072 Aquilegia oxysepala HOM05D004591 ORTHO05D005749 1.8e-36 155.6 82 87.8
Gorai.011G187900 Gossypium raimondii HOM05D004591 ORTHO05D005749 1.8e-36 155.6 82 86.6
TAR636G0963 Trochodendron aralioides HOM05D004591 ORTHO05D005749 1.8e-36 155.6 82 85.4
Atru.chr4.2787 Acer truncatum HOM05D004591 ORTHO05D005749 2.3e-36 155.2 83 84.3
EL10Ac3g06572 Beta vulgaris HOM05D004591 ORTHO05D005749 2.3e-36 155.2 81 87.7
CAN.G580.3 Capsicum annuum HOM05D004591 ORTHO05D005749 2.3e-36 155.2 81 86.4
Haze_01244 Corylus avellana HOM05D004591 ORTHO05D005749 2.3e-36 155.2 83 85.5
Lj3A813T31 Lonicera japonica HOM05D004591 ORTHO05D005749 2.3e-36 155.2 80 90.0
Oeu044779.2 Olea europaea HOM05D004591 ORTHO05D005749 2.3e-36 155.2 81 86.4
Peaxi162Scf00386g00533 Petunia axillaris HOM05D004591 ORTHO05D005749 2.3e-36 155.2 81 85.2
Phvul.003G102400 Phaseolus vulgaris HOM05D004591 ORTHO05D005749 2.3e-36 155.2 83 86.7
SEGI_19336 Sequoiadendron giganteum HOM05D004591 ORTHO05D005749 2.3e-36 155.2 82 86.6
GSVIVG01017781001 Vitis vinifera HOM05D004591 ORTHO05D005749 2.3e-36 155.2 82 87.8
COL.COLO4_13908 Corchorus olitorius HOM05D004591 ORTHO05D005749 3.0e-36 154.8 83 85.5
Duzib151G0997 Durio zibethinus HOM05D004591 ORTHO05D005749 3.0e-36 154.8 82 85.4
Eucgr.H03866 Eucalyptus grandis HOM05D004591 ORTHO05D005749 3.0e-36 154.8 83 84.3
TAR365G0597 Trochodendron aralioides HOM05D004591 ORTHO05D005749 3.0e-36 154.8 82 86.6
vmacro08109 Vaccinium macrocarpon HOM05D004591 ORTHO05D005749 3.0e-36 154.8 83 85.5
MSTRG.28019 Avicennia marina HOM05D004591 ORTHO05D005749 3.9e-36 154.5 81 86.4
Gohir.D10G168300 Gossypium hirsutum HOM05D004591 ORTHO05D005749 3.9e-36 154.5 83 85.5
Hund20576 Selenicereus undatus HOM05D004591 ORTHO05D005749 3.9e-36 154.5 81 87.7
TWI09G1039 Tripterygium wilfordii HOM05D004591 ORTHO05D005749 3.9e-36 154.5 80 87.5
Glyma.17G024200 Glycine max HOM05D004591 ORTHO05D005749 5.2e-36 154.1 81 86.4
Lsat_1_v5_gn_5_52860 Lactuca sativa HOM05D004591 ORTHO05D005749 5.2e-36 154.1 81 85.2
Lj4g0023442 Lotus japonicus HOM05D004591 ORTHO05D005749 5.2e-36 154.1 81 86.4
unitig_578.g16759 Utricularia gibba HOM05D004591 ORTHO05D005749 5.2e-36 154.1 81 86.4
Glyma.07G250200 Glycine max HOM05D004591 ORTHO05D005749 6.7e-36 153.7 81 86.4
Rhsim04G0218600 Rhododendron simsii HOM05D004591 ORTHO05D005749 6.7e-36 153.7 83 84.3
TPR.G14635 Trifolium pratense HOM05D004591 ORTHO05D005749 6.7e-36 153.7 83 86.7
C03p10420 Brassica napus HOM05D004591 ORTHO05D005749 8.8e-36 153.3 82 85.4
AUR62041198 Chenopodium quinoa HOM05D004591 ORTHO05D005749 1.5e-35 152.5 81 86.4
Sed0000507 Sechium edule HOM05D004591 ORTHO05D005749 1.5e-35 152.5 82 85.4
CiPaw.02G085000 Carya illinoinensis HOM05D004591 ORTHO05D005749 2.0e-35 152.1 83 84.3
ClCG05G005920 Citrullus lanatus HOM05D004591 ORTHO05D005749 2.0e-35 152.1 82 86.6
MELO3C006623.2 Cucumis melo HOM05D004591 ORTHO05D005749 2.0e-35 152.1 82 86.6
CsaV3_3G014300 Cucumis sativus L. HOM05D004591 ORTHO05D005749 2.0e-35 152.1 82 86.6
DCAR_002452 Daucus carota HOM05D004591 ORTHO05D005749 2.0e-35 152.1 82 84.1
Lalb_Chr13g0303761 Lupinus albus HOM05D004591 ORTHO05D005749 2.0e-35 152.1 81 84.0
Solyc01g067500.3 Solanum lycopersicum HOM05D004591 ORTHO05D005749 2.0e-35 152.1 81 85.2
Sopen01g029430 Solanum pennellii HOM05D004591 ORTHO05D005749 2.0e-35 152.1 81 85.2
Zm00001eb418170 Zea mays HOM05D004591 ORTHO05D005749 3.3e-35 151.4 81 84.0
Medtr4g119230 Medicago truncatula HOM05D004591 ORTHO05D005749 4.4e-35 151.0 83 84.3
QL06p007990 Quercus lobata HOM05D004591 ORTHO05D005749 4.4e-35 151.0 82 82.9
SMO118G0294 Selaginella moellendorffii HOM05D004591 ORTHO05D005749 4.4e-35 151.0 81 80.2
Zm00001eb354190 Zea mays HOM05D004591 ORTHO05D005749 5.7e-35 150.6 81 81.5
Os05g0149800 Oryza sativa ssp. japonica HOM05D004591 ORTHO05D005749 7.4e-35 150.2 81 82.7
Pp3c6_6290 Physcomitrium patens HOM05D004591 ORTHO05D005749 7.4e-35 150.2 80 82.5
AL6G29850 Arabidopsis lyrata HOM05D004591 ORTHO05D005749 1.3e-34 149.4 75 88.0
Manes.15G015000 Manihot esculenta HOM05D004591 ORTHO05D005749 1.3e-34 149.4 83 80.7
AT5G18580 Arabidopsis thaliana HOM05D004591 ORTHO05D005749 1.7e-34 149.1 75 88.0
Sp6g25750 Schrenkiella parvula HOM05D004591 ORTHO05D005749 1.7e-34 149.1 75 88.0
THA.LOC104818847 Tarenaya hassleriana HOM05D004591 ORTHO05D005749 2.2e-34 148.7 74 89.2
BcaB01g05264 Brassica carinata HOM05D004591 ORTHO05D005749 2.8e-34 148.3 75 88.0
BcaB05g23341 Brassica carinata HOM05D004591 ORTHO05D005749 2.8e-34 148.3 75 88.0
BcaC03g13610 Brassica carinata HOM05D004591 ORTHO05D005749 2.8e-34 148.3 75 88.0
A02p05010 Brassica napus HOM05D004591 ORTHO05D005749 2.8e-34 148.3 75 88.0
A03p08950 Brassica napus HOM05D004591 ORTHO05D005749 2.8e-34 148.3 75 88.0
C02p10040 Brassica napus HOM05D004591 ORTHO05D005749 2.8e-34 148.3 75 88.0
BolC2t06906H Brassica oleracea HOM05D004591 ORTHO05D005749 2.8e-34 148.3 75 88.0
BolC3t13524H Brassica oleracea HOM05D004591 ORTHO05D005749 2.8e-34 148.3 75 88.0
BraA02t05460Z Brassica rapa HOM05D004591 ORTHO05D005749 2.8e-34 148.3 75 88.0
BraA03t10221Z Brassica rapa HOM05D004591 ORTHO05D005749 2.8e-34 148.3 75 88.0
Carub.0006s1686 Capsella rubella HOM05D004591 ORTHO05D005749 2.8e-34 148.3 82 82.9
Thhalv10013373m.g Eutrema salsugineum HOM05D004591 ORTHO05D005749 2.8e-34 148.3 75 88.0
CARHR194440 Cardamine hirsuta HOM05D004591 ORTHO05D005749 3.7e-34 147.9 75 86.7
Aa31LG11G11040 Aethionema arabicum HOM05D004591 ORTHO05D005749 8.2e-34 146.7 75 85.3
A10p20980 Brassica napus HOM05D004591 ORTHO05D005749 8.2e-34 146.7 75 86.7
BraA10t44163Z Brassica rapa HOM05D004591 ORTHO05D005749 8.2e-34 146.7 75 86.7
BcaB08g36661 Brassica carinata HOM05D004591 ORTHO05D005749 1.1e-33 146.4 82 80.5
BcaC04g18665 Brassica carinata HOM05D004591 ORTHO05D005749 5.3e-33 144.1 75 85.3
C09p57910 Brassica napus HOM05D004591 ORTHO05D005749 5.3e-33 144.1 75 85.3
BolC9t58658H Brassica oleracea HOM05D004591 ORTHO05D005749 5.3e-33 144.1 75 85.3
Mapoly0035s0147 Marchantia polymorpha HOM05D004591 ORTHO05D005749 6.5e-31 137.1 81 74.1
HanXRQChr06g0174301 Helianthus annuus HOM05D004591 ORTHO05D005749 1.9e-30 135.6 78 75.6
ECA246G1561 Erigeron canadensis HOM05D004591 ORTHO05D005749 9.4e-30 133.3 78 74.4
Lsat_1_v5_gn_3_27301 Lactuca sativa HOM05D004591 ORTHO05D005749 9.4e-30 133.3 77 74.0
CBR_g7999 Chara braunii HOM05D004591 ORTHO05D005749 1.8e-25 119.0 74 70.3
Ca_21537_v3 Cicer arietinum L. HOM05D004591 ORTHO05D005749 1.2e-24 116.3 62 82.3
ECA240G1474 Erigeron canadensis HOM05D004591 ORTHO05D005749 2.0e-24 115.5 59 83.1
Nitab4.5_0000644g0140 Nicotiana tabacum HOM05D004591 ORTHO05D005749 1.7e-23 112.5 62 83.9
ATR0222G012 Amborella trichopoda HOM05D004591 ORTHO05D005749 8.8e-20 100.1 54 87.0
PRCOL_00004048 Prasinoderma coloniale HOM05D004591 ORTHO05D005749 2.1e-13 79.0 75 45.3
AUR62043784 Chenopodium quinoa HOM05D004591 ORTHO05D005749 2.8e-13 78.6 44 84.1
MCO11G522 Micromonas commoda HOM05D004591 ORTHO05D005749 6.1e-13 77.4 79 48.1
HPP92_016927 Vanilla planifolia HOM05D004591 ORTHO05D005749 6.8e-12 73.9 35 82.9
Gohir.A09G240300 Gossypium hirsutum HOM05D004591 ORTHO05D047206 2.0e-08 62.4 32 78.1
Gorai.006G264500 Gossypium raimondii HOM05D004591 ORTHO05D047206 2.0e-08 62.4 32 78.1


User provided reference genes

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