Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0706G173 Amborella trichopoda HOM05D004637 ORTHO05D005320 1.6e-22 108.6 56 100.0
Nn5g30394 Nelumbo nucifera HOM05D004637 ORTHO05D005320 2.3e-13 78.2 56 64.3
MSTRG.25070 Avicennia marina HOM05D004637 ORTHO05D005320 8.6e-13 76.3 56 66.1
Ah.08g212480 Amaranthus hybridus HOM05D004637 ORTHO05D005320 1.5e-12 75.5 56 60.7
EL10As7g23788 Beta vulgaris HOM05D004637 ORTHO05D005320 1.5e-12 75.5 56 62.5
Actinidia08272 Actinidia chinensis HOM05D004637 ORTHO05D005320 3.3e-12 74.3 56 64.3
PSO170G3952 Papaver somniferum HOM05D004637 ORTHO05D005320 4.3e-12 73.9 56 66.1
PSO210G5934 Papaver somniferum HOM05D004637 ORTHO05D005320 4.3e-12 73.9 56 66.1
Potri.014G023800 Populus trichocarpa HOM05D004637 ORTHO05D005320 5.6e-12 73.6 56 62.5
Cc10_g04860 Coffea canephora HOM05D004637 ORTHO05D005320 1.2e-11 72.4 56 62.5
Migut.N02728 Erythranthe guttata HOM05D004637 ORTHO05D005320 1.6e-11 72.0 56 62.5
PGR031G3707 Punica granatum HOM05D004637 ORTHO05D005320 1.6e-11 72.0 53 64.2
TWI36G0292 Tripterygium wilfordii HOM05D004637 ORTHO05D005320 1.6e-11 72.0 54 64.8
Actinidia38079 Actinidia chinensis HOM05D004637 ORTHO05D005320 2.1e-11 71.6 56 60.7
ClCG08G016150 Citrullus lanatus HOM05D004637 ORTHO05D005320 2.1e-11 71.6 56 60.7
Dinv35927 Davidia involucrata HOM05D004637 ORTHO05D005320 2.8e-11 71.2 53 64.2
Sed0017846 Sechium edule HOM05D004637 ORTHO05D005320 2.8e-11 71.2 56 60.7
Peaxi162Scf00160g00024 Petunia axillaris HOM05D004637 ORTHO05D005320 3.6e-11 70.9 56 62.5
TAR381G1093 Trochodendron aralioides HOM05D004637 ORTHO05D005320 3.6e-11 70.9 56 60.7
Dinv39271 Davidia involucrata HOM05D004637 ORTHO05D005320 4.7e-11 70.5 53 62.3
Thecc.08G001300 Theobroma cacao HOM05D004637 ORTHO05D005320 4.7e-11 70.5 54 64.8
MELO3C010837.2 Cucumis melo HOM05D004637 ORTHO05D005320 6.2e-11 70.1 56 58.9
CsaV3_2G026470 Cucumis sativus L. HOM05D004637 ORTHO05D005320 6.2e-11 70.1 56 58.9
Manes.05G177100 Manihot esculenta HOM05D004637 ORTHO05D005320 6.2e-11 70.1 53 60.4
Peaxi162Scf01087g00125 Petunia axillaris HOM05D004637 ORTHO05D005320 6.2e-11 70.1 56 62.5
unitig_26.g9809 Utricularia gibba HOM05D004637 ORTHO05D005320 6.2e-11 70.1 56 60.7
Nitab4.5_0006004g0010 Nicotiana tabacum HOM05D004637 ORTHO05D005320 1.1e-10 69.3 56 60.7
HPP92_003482 Vanilla planifolia HOM05D004637 ORTHO05D005320 1.1e-10 69.3 56 60.7
GSVIVG01009436001 Vitis vinifera HOM05D004637 ORTHO05D005320 1.1e-10 69.3 56 58.9
Nitab4.5_0004339g0040 Nicotiana tabacum HOM05D004637 ORTHO05D005320 1.4e-10 68.9 56 60.7
THA.LOC104824981 Tarenaya hassleriana HOM05D004637 ORTHO05D005320 1.4e-10 68.9 56 58.9
CSS0035210 Camellia sinensis var. sinensis HOM05D004637 ORTHO05D005320 1.8e-10 68.6 53 62.3
CAN.G1194.20 Capsicum annuum HOM05D004637 ORTHO05D005320 1.8e-10 68.6 56 62.5
Eucgr.F02306 Eucalyptus grandis HOM05D004637 ORTHO05D005320 2.3e-10 68.2 56 53.6
PGSC0003DMG400015434 Solanum tuberosum HOM05D004637 ORTHO05D005320 3.1e-10 67.8 56 60.7
Duzib093G0653 Durio zibethinus HOM05D004637 ORTHO05D005320 4.0e-10 67.4 54 59.3
Rhsim07G0225500 Rhododendron simsii HOM05D004637 ORTHO05D005320 4.0e-10 67.4 57 63.2
Ciclev10002344m.g Citrus clementina HOM05D004637 ORTHO05D005320 5.2e-10 67.0 53 54.7
Eucgr.F00183 Eucalyptus grandis HOM05D004637 ORTHO05D005320 5.2e-10 67.0 54 59.3
Solyc12g088660.2 Solanum lycopersicum HOM05D004637 ORTHO05D005320 5.2e-10 67.0 56 60.7
Sopen12g030560 Solanum pennellii HOM05D004637 ORTHO05D005320 5.2e-10 67.0 56 60.7
Atru.chr13.748 Acer truncatum HOM05D004637 ORTHO05D005320 6.8e-10 66.6 54 59.3
Aa31LG8G3140 Aethionema arabicum HOM05D004637 ORTHO05D005320 6.8e-10 66.6 56 55.4
Os07g0479200 Oryza sativa ssp. japonica HOM05D004637 ORTHO05D005320 1.2e-09 65.9 56 57.1
Hma1.2p1_0360F.1_g135900 Hydrangea macrophylla HOM05D004637 ORTHO05D005320 2.0e-09 65.1 53 56.6
HPP92_026880 Vanilla planifolia HOM05D004637 ORTHO05D005320 2.0e-09 65.1 57 59.6
HanXRQChr10g0309661 Helianthus annuus HOM05D004637 ORTHO05D005320 4.4e-09 63.9 56 60.7
Lsat_1_v5_gn_1_22460 Lactuca sativa HOM05D004637 ORTHO05D005320 7.5e-09 63.2 58 58.6
CARHR288440 Cardamine hirsuta HOM05D004637 ORTHO05D005320 1.3e-08 62.4 56 51.8
Lj5g0011390 Lotus japonicus HOM05D004637 ORTHO05D005320 1.3e-08 62.4 56 51.8
QL02p003978 Quercus lobata HOM05D004637 ORTHO05D005320 1.3e-08 62.4 53 56.6
Carub.0006s2649 Capsella rubella HOM05D004637 ORTHO05D005320 1.7e-08 62.0 56 51.8
ECA247G2514 Erigeron canadensis HOM05D004637 ORTHO05D005320 1.7e-08 62.0 53 54.7
Prupe.1G430800 Prunus persica HOM05D004637 ORTHO05D005320 1.7e-08 62.0 53 54.7
AL6G41290 Arabidopsis lyrata HOM05D004637 ORTHO05D005320 2.2e-08 61.6 56 51.8
AT4G07390 Arabidopsis thaliana HOM05D004637 ORTHO05D005320 2.2e-08 61.6 56 51.8
AUR62002897 Chenopodium quinoa HOM05D004637 ORTHO05D005320 2.2e-08 61.6 49 57.1
BcaB01g02883 Brassica carinata HOM05D004637 ORTHO05D005320 2.9e-08 61.2 56 51.8
A03p27890 Brassica napus HOM05D004637 ORTHO05D005320 2.9e-08 61.2 56 51.8
BraA03t12001Z Brassica rapa HOM05D004637 ORTHO05D005320 2.9e-08 61.2 56 51.8
CANSAT54G2334 Cannabis sativa HOM05D004637 ORTHO05D005320 2.9e-08 61.2 43 65.1
TPR.G3787 Trifolium pratense HOM05D004637 ORTHO05D005320 2.9e-08 61.2 54 51.9
TWI56G1297 Tripterygium wilfordii HOM05D004637 ORTHO05D005320 2.9e-08 61.2 54 53.7
FvH4_2g33730 Fragaria vesca HOM05D004637 ORTHO05D005320 3.7e-08 60.8 53 52.8
RcHm_v2.0_Chr6g0308821 Rosa chinensis HOM05D004637 ORTHO05D005320 3.7e-08 60.8 58 53.4
CARHR285840 Cardamine hirsuta HOM05D004637 ORTHO05D005320 4.9e-08 60.5 52 53.8
Gohir.A05G205600 Gossypium hirsutum HOM05D004637 ORTHO05D005320 4.9e-08 60.5 56 53.6
SEGI_04928 Sequoiadendron giganteum HOM05D004637 ORTHO05D005320 4.9e-08 60.5 56 51.8
THA.LOC104825764 Tarenaya hassleriana HOM05D004637 ORTHO05D005320 4.9e-08 60.5 54 51.9
BcaC01g04795 Brassica carinata HOM05D004637 ORTHO05D005320 6.4e-08 60.1 53 52.8
C03p33670 Brassica napus HOM05D004637 ORTHO05D005320 6.4e-08 60.1 53 52.8
BolC3t15687H Brassica oleracea HOM05D004637 ORTHO05D005320 6.4e-08 60.1 53 52.8
Thhalv10028929m.g Eutrema salsugineum HOM05D004637 ORTHO05D005320 6.4e-08 60.1 56 51.8
Medtr1g018800 Medicago truncatula HOM05D004637 ORTHO05D005320 8.3e-08 59.7 54 51.9
Mapoly0040s0013 Marchantia polymorpha HOM05D004637 ORTHO05D005320 1.4e-07 58.9 49 57.1
Gohir.D05G208900 Gossypium hirsutum HOM05D004637 ORTHO05D005320 1.9e-07 58.5 56 51.8
MD15G1077400 Malus domestica HOM05D004637 ORTHO05D005320 1.9e-07 58.5 58 51.7
AL8G35940 Arabidopsis lyrata HOM05D004637 ORTHO05D005320 2.4e-07 58.2 54 51.9
Gorai.009G215300 Gossypium raimondii HOM05D004637 ORTHO05D005320 2.4e-07 58.2 56 51.8
Glyma.14G085900 Glycine max HOM05D004637 ORTHO05D005320 3.2e-07 57.8 53 54.7
Glyma.17G238800 Glycine max HOM05D004637 ORTHO05D005320 3.2e-07 57.8 53 54.7
Sp6g10610 Schrenkiella parvula HOM05D004637 ORTHO05D005320 3.2e-07 57.8 52 50.0
BcaC03g14011 Brassica carinata HOM05D004637 ORTHO05D005320 5.4e-07 57.0 55 54.5
A02p07110 Brassica napus HOM05D004637 ORTHO05D005320 5.4e-07 57.0 55 54.5
BolC2t07347H Brassica oleracea HOM05D004637 ORTHO05D005320 5.4e-07 57.0 55 54.5
CiPaw.15G052200 Carya illinoinensis HOM05D004637 ORTHO05D005320 5.4e-07 57.0 53 54.7
CiPaw.16G038000 Carya illinoinensis HOM05D004637 ORTHO05D005320 5.4e-07 57.0 54 51.9
BraA02t05792Z Brassica rapa HOM05D004637 ORTHO05D005320 7.0e-07 56.6 55 52.7
SMO365G0080 Selaginella moellendorffii HOM05D004637 ORTHO05D005320 9.2e-07 56.2 51 47.1
BcaB01g04583 Brassica carinata HOM05D004637 ORTHO05D005320 1.2e-06 55.8 56 51.8
C02p12470 Brassica napus HOM05D004637 ORTHO05D005320 1.2e-06 55.8 55 52.7
MD08G1093700 Malus domestica HOM05D004637 ORTHO05D005320 1.2e-06 55.8 52 51.9
CDE01G0812 Ceratophyllum demersum HOM05D004637 ORTHO05D005320 1.6e-06 55.5 53 60.4
Hund04212 Selenicereus undatus HOM05D004637 ORTHO05D005320 1.6e-06 55.5 46 58.7
BcaB05g22509 Brassica carinata HOM05D004637 ORTHO05D005320 2.7e-06 54.7 59 50.8
Carub.0008s2014 Capsella rubella HOM05D004637 ORTHO05D005320 2.7e-06 54.7 54 51.9
BolC3t13818H Brassica oleracea HOM05D004637 ORTHO05D005320 7.8e-06 53.1 59 45.8
Thhalv10015267m.g Eutrema salsugineum HOM05D004637 ORTHO05D005320 7.8e-06 53.1 60 46.7


User provided reference genes

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