Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0706G141 Amborella trichopoda HOM05D007613 ORTHO05D009344 1.3e-67 259.6 132 100.0
TAR636G2501 Trochodendron aralioides HOM05D007613 ORTHO05D009344 3.8e-27 125.2 119 47.9
DCAR_018332 Daucus carota HOM05D007613 ORTHO05D009344 1.4e-26 123.2 129 45.0
HanXRQChr13g0413041 Helianthus annuus HOM05D007613 ORTHO05D009344 9.4e-26 120.6 121 43.8
Lsat_1_v5_gn_5_191040 Lactuca sativa HOM05D007613 ORTHO05D009344 4.7e-25 118.2 123 43.1
Actinidia24821 Actinidia chinensis HOM05D007613 ORTHO05D009344 2.3e-24 115.9 121 45.5
Nitab4.5_0002820g0060 Nicotiana tabacum HOM05D007613 ORTHO05D009344 3.9e-24 115.2 121 44.6
ECA248G1192 Erigeron canadensis HOM05D007613 ORTHO05D009344 5.1e-24 114.8 123 43.1
Nitab4.5_0019054g0010 Nicotiana tabacum HOM05D007613 ORTHO05D009344 5.1e-24 114.8 121 44.6
CDE08G0198 Ceratophyllum demersum HOM05D007613 ORTHO05D009344 6.7e-24 114.4 120 44.2
Potri.014G128900 Populus trichocarpa HOM05D007613 ORTHO05D009344 6.7e-24 114.4 122 47.5
Ciclev10022836m.g Citrus clementina HOM05D007613 ORTHO05D009344 8.8e-24 114.0 119 45.4
Manes.01G219200 Manihot esculenta HOM05D007613 ORTHO05D009344 8.8e-24 114.0 122 46.7
vmacro15014 Vaccinium macrocarpon HOM05D007613 ORTHO05D009344 1.5e-23 113.2 126 43.7
QL12p028448 Quercus lobata HOM05D007613 ORTHO05D009344 7.4e-23 110.9 121 42.1
Sopen06g035930 Solanum pennellii HOM05D007613 ORTHO05D009344 7.4e-23 110.9 123 43.1
Peaxi162Scf00140g01222 Petunia axillaris HOM05D007613 ORTHO05D009344 9.7e-23 110.5 121 43.0
CiPaw.07G109200 Carya illinoinensis HOM05D007613 ORTHO05D009344 1.3e-22 110.2 119 42.9
Solyc06g084550.3 Solanum lycopersicum HOM05D007613 ORTHO05D009344 1.3e-22 110.2 123 43.1
arahy.Tifrunner.gnm1.ann1.BW40YJ Arachis hypogaea HOM05D007613 ORTHO05D009344 2.8e-22 109.0 119 42.9
Oeu048336.2 Olea europaea HOM05D007613 ORTHO05D009344 2.8e-22 109.0 124 41.9
Eucgr.H01109 Eucalyptus grandis HOM05D007613 ORTHO05D009344 3.7e-22 108.6 121 43.0
PGR119G2478 Punica granatum HOM05D007613 ORTHO05D009344 3.7e-22 108.6 123 43.9
arahy.Tifrunner.gnm1.ann1.7MAL8N Arachis hypogaea HOM05D007613 ORTHO05D009344 4.8e-22 108.2 119 42.9
MELO3C016000.2 Cucumis melo HOM05D007613 ORTHO05D009344 6.3e-22 107.8 119 42.0
CsaV3_7G029280 Cucumis sativus L. HOM05D007613 ORTHO05D009344 8.2e-22 107.5 119 42.0
Thecc.01G300700 Theobroma cacao HOM05D007613 ORTHO05D009344 1.4e-21 106.7 100 48.0
Atru.chr5.1146 Acer truncatum HOM05D007613 ORTHO05D009344 2.4e-21 105.9 120 42.5
CAN.G1209.25 Capsicum annuum HOM05D007613 ORTHO05D009344 4.1e-21 105.1 123 40.7
GSVIVG01028017001 Vitis vinifera HOM05D007613 ORTHO05D009344 5.3e-21 104.8 119 43.7
VMungo0720G1265 Vigna mungo HOM05D007613 ORTHO05D009344 1.2e-20 103.6 120 42.5
PSO170G2016 Papaver somniferum HOM05D007613 ORTHO05D009344 1.5e-20 103.2 128 38.3
Duzib133G0913 Durio zibethinus HOM05D007613 ORTHO05D009344 2.0e-20 102.8 119 42.0
MD03G1288400 Malus domestica HOM05D007613 ORTHO05D009344 5.9e-20 101.3 119 39.5
Prupe.8G261600 Prunus persica HOM05D007613 ORTHO05D009344 1.0e-19 100.5 119 40.3
Lalb_Chr06g0166471 Lupinus albus HOM05D007613 ORTHO05D009344 1.3e-19 100.1 120 40.0
Phvul.007G146700 Phaseolus vulgaris HOM05D007613 ORTHO05D009344 1.3e-19 100.1 120 40.0
Cpa.g.sc9.260 Carica papaya HOM05D000286 ORTHO05D000170 2.2e-19 99.4 105 43.8
Cc01_g20860 Coffea canephora HOM05D007613 ORTHO05D009344 2.2e-19 99.4 113 41.6
Gorai.008G145100 Gossypium raimondii HOM05D007613 ORTHO05D009344 2.2e-19 99.4 123 39.8
SMO347G0100 Selaginella moellendorffii HOM05D007613 ORTHO05D009344 3.8e-19 98.6 122 36.9
TPR.G33996 Trifolium pratense HOM05D007613 ORTHO05D009344 3.8e-19 98.6 119 40.3
MSTRG.18147 Avicennia marina HOM05D007613 ORTHO05D009344 5.0e-19 98.2 107 41.1
EL10Ac7g17473 Beta vulgaris HOM05D007613 ORTHO05D009344 6.5e-19 97.8 122 40.2
Lj5g0017580 Lotus japonicus HOM05D007613 ORTHO05D009344 6.5e-19 97.8 121 40.5
Medtr1g088460 Medicago truncatula HOM05D007613 ORTHO05D009344 6.5e-19 97.8 119 40.3
Gohir.D12G134100 Gossypium hirsutum HOM05D007613 ORTHO05D009344 1.1e-18 97.1 123 39.8
Lalb_Chr02g0146351 Lupinus albus HOM05D007613 ORTHO05D009344 1.4e-18 96.7 119 37.8
Psat6g165400 Pisum sativum HOM05D007613 ORTHO05D009344 2.5e-18 95.9 119 39.5
THA.LOC104798831 Tarenaya hassleriana HOM05D007613 ORTHO05D009344 4.2e-18 95.1 119 38.7
Migut.D00222 Erythranthe guttata HOM05D007613 ORTHO05D009344 7.2e-18 94.4 107 41.1
RcHm_v2.0_Chr6g0294031 Rosa chinensis HOM05D007613 ORTHO05D009344 1.2e-17 93.6 117 39.3
CARHR173140 Cardamine hirsuta HOM05D007613 ORTHO05D009344 1.6e-17 93.2 119 37.0
Hma1.2p1_0491F.1_g164570 Hydrangea macrophylla HOM05D007613 ORTHO05D009344 4.7e-17 91.7 122 37.7
Nn3g21498 Nelumbo nucifera HOM05D007613 ORTHO05D009344 6.1e-17 91.3 79 48.1
Ah.08g213430 Amaranthus hybridus HOM05D000286 ORTHO05D000170 1.0e-16 90.5 114 38.6
BraA04t15767Z Brassica rapa HOM05D007613 ORTHO05D009344 1.0e-16 90.5 119 35.3
Pp3c19_22480 Physcomitrium patens HOM05D007613 ORTHO05D009344 1.4e-16 90.1 120 38.3
AT3G62880 Arabidopsis thaliana HOM05D007613 ORTHO05D009344 1.8e-16 89.7 119 35.3
BcaB02g08092 Brassica carinata HOM05D007613 ORTHO05D009344 1.8e-16 89.7 119 36.1
C04p30380 Brassica napus HOM05D007613 ORTHO05D009344 1.8e-16 89.7 119 35.3
BolC4t24569H Brassica oleracea HOM05D007613 ORTHO05D009344 1.8e-16 89.7 119 35.3
Aa31LG10G16510 Aethionema arabicum HOM05D007613 ORTHO05D009344 2.3e-16 89.4 126 32.5
AL5G45650 Arabidopsis lyrata HOM05D007613 ORTHO05D009344 2.3e-16 89.4 119 34.5
TWI59G0030 Tripterygium wilfordii HOM05D007613 ORTHO05D009344 2.3e-16 89.4 119 36.1
Sp5g00640 Schrenkiella parvula HOM05D007613 ORTHO05D009344 3.0e-16 89.0 119 36.1
Ca_10334_v3 Cicer arietinum L. HOM05D007613 ORTHO05D009344 5.2e-16 88.2 119 37.8
Glyma.10G018300 Glycine max HOM05D007613 ORTHO05D009344 1.1e-15 87.0 122 38.5
FvH4_2g25740 Fragaria vesca HOM05D007613 ORTHO05D009344 2.6e-15 85.9 117 36.8
Thhalv10006304m.g Eutrema salsugineum HOM05D007613 ORTHO05D009344 4.4e-15 85.1 119 34.5
CSS0026666 Camellia sinensis var. sinensis HOM05D007613 ORTHO05D009344 7.4e-15 84.3 87 42.5
Aqoxy2G02939 Aquilegia oxysepala HOM05D007613 ORTHO05D009344 1.1e-13 80.5 114 31.6
COL.COLO4_23344 Corchorus olitorius HOM05D007613 ORTHO05D009344 1.1e-13 80.5 80 43.8
A04p00480 Brassica napus HOM05D007613 ORTHO05D009344 1.8e-13 79.7 104 35.6
Migut.B01150 Erythranthe guttata HOM05D007613 ORTHO05D009344 2.4e-13 79.3 90 42.2
Rhsim01G0285300 Rhododendron simsii HOM05D007613 ORTHO05D009344 7.7e-12 74.3 98 34.7
ClCG09G005860 Citrullus lanatus HOM05D007613 ORTHO05D009344 1.0e-11 73.9 125 35.2
FAN20G1450 Fragaria x ananassa HOM05D007613 ORTHO05D009344 2.9e-11 72.4 137 30.7
Haze_04939 Corylus avellana HOM05D007613 ORTHO05D009344 5.0e-11 71.6 94 37.2
FAN27G2766 Fragaria x ananassa HOM05D007613 ORTHO05D009344 1.1e-10 70.5 80 40.0
Mapoly0048s0107 Marchantia polymorpha HOM05D007613 ORTHO05D009344 5.5e-10 68.2 96 36.5
PGSC0003DMG400024046 Solanum tuberosum HOM05D007613 ORTHO05D009344 2.1e-09 66.2 146 30.1
SGA_v2.0_scaffold1G00364 Striga asiatica HOM05D001636 ORTHO05D003817 1.0e-08 63.9 79 41.8
Sabra14G0095700 Salix brachista HOM05D007613 ORTHO05D009344 6.7e-08 61.2 122 34.4
BcaC02g10319 Brassica carinata HOM05D007613 ORTHO05D009344 5.7e-07 58.2 75 34.7
Oeu033746.1 Olea europaea HOM05D004743 ORTHO05D005698 7.5e-07 57.8 122 30.3
Hund18170 Selenicereus undatus HOM05D007613 ORTHO05D009344 1.3e-06 57.0 68 41.2
ATR0605G135 Amborella trichopoda HOM05D004743 ORTHO05D005698 1.7e-06 56.6 122 33.6
Hund19191 Selenicereus undatus HOM05D004743 ORTHO05D005698 1.7e-06 56.6 122 32.8
Cpa.g.sc85.89 Carica papaya HOM05D004743 ORTHO05D005698 2.2e-06 56.2 122 29.5
Manes.09G032100 Manihot esculenta HOM05D004743 ORTHO05D005698 2.2e-06 56.2 122 32.0
Thecc.05G168500 Theobroma cacao HOM05D004743 ORTHO05D005698 2.2e-06 56.2 122 30.3
Actinidia21047 Actinidia chinensis HOM05D007613 ORTHO05D009344 2.8e-06 55.8 62 37.1
Sc13g0002130 Simmondsia chinensis HOM05D004743 ORTHO05D005698 2.8e-06 55.8 122 31.1
MSTRG.19893 Avicennia marina HOM05D004743 ORTHO05D005698 3.7e-06 55.5 122 31.1
AUR62008666 Chenopodium quinoa HOM05D007613 ORTHO05D009344 4.8e-06 55.1 75 37.3
COL.COLO4_36134 Corchorus olitorius HOM05D004743 ORTHO05D005698 4.8e-06 55.1 122 31.1
CDE04G2796 Ceratophyllum demersum HOM05D004743 ORTHO05D005698 6.3e-06 54.7 122 30.3
CDE07G0719 Ceratophyllum demersum HOM05D004743 ORTHO05D005698 6.3e-06 54.7 122 29.5
Duzib106G0699 Durio zibethinus HOM05D004743 ORTHO05D005698 6.3e-06 54.7 122 31.1
Gohir.A01G192000 Gossypium hirsutum HOM05D004743 ORTHO05D005698 8.2e-06 54.3 122 29.5
Gohir.D01G178000 Gossypium hirsutum HOM05D004743 ORTHO05D005698 8.2e-06 54.3 122 29.5
Gorai.002G225100 Gossypium raimondii HOM05D004743 ORTHO05D005698 8.2e-06 54.3 122 29.5


User provided reference genes

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