Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0706G093 Amborella trichopoda HOM05D001151 ORTHO05D068099 8.0e-42 173.3 87 100.0
Nn4g26012 Nelumbo nucifera HOM05D001151 ORTHO05D001504 1.4e-09 66.2 75 49.3
MBI18_g22376_MAGBIO Magnolia biondii HOM05D001151 ORTHO05D001504 2.6e-08 62.0 61 55.7
Phvul.006G161900 Phaseolus vulgaris HOM05D001151 ORTHO05D001504 2.6e-08 62.0 79 49.4
TAR362G0497 Trochodendron aralioides HOM05D001151 ORTHO05D001504 5.8e-08 60.8 77 49.4
Nn3g21310 Nelumbo nucifera HOM05D001151 ORTHO05D001504 9.9e-08 60.1 75 50.7
Oeu021626.1 Olea europaea HOM05D001151 ORTHO05D001504 1.7e-07 59.3 78 47.4
VMungo0540G1263 Vigna mungo HOM05D001151 ORTHO05D001504 6.4e-07 57.4 79 46.8
THA.LOC104802560 Tarenaya hassleriana HOM05D001151 ORTHO05D001504 8.4e-07 57.0 57 49.1
AT4G15630 Arabidopsis thaliana HOM05D001151 ORTHO05D001504 1.4e-06 56.2 51 60.8
TWI09G1306 Tripterygium wilfordii HOM05D001151 ORTHO05D001504 1.4e-06 56.2 86 41.9
Aqoxy5G00609 Aquilegia oxysepala HOM05D001151 ORTHO05D001504 1.9e-06 55.8 77 41.6
Ciclev10005989m.g Citrus clementina HOM05D001151 ORTHO05D001504 3.2e-06 55.1 51 56.9
Hma1.2p1_0823F.1_g224680 Hydrangea macrophylla HOM05D001151 ORTHO05D001504 3.2e-06 55.1 51 58.8
BcaB04g18302 Brassica carinata HOM05D001151 ORTHO05D001504 4.2e-06 54.7 51 60.8
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 4.2e-06 54.7 66 45.5
Lj4g0003966 Lotus japonicus HOM05D001151 ORTHO05D001504 4.2e-06 54.7 51 56.9
Hund28066 Selenicereus undatus HOM05D001151 ORTHO05D001504 4.2e-06 54.7 83 42.2
Hund28075 Selenicereus undatus HOM05D001151 ORTHO05D001504 4.2e-06 54.7 83 42.2
Sopen01g029210 Solanum pennellii HOM05D001151 ORTHO05D001504 4.2e-06 54.7 56 50.0
Actinidia23425 Actinidia chinensis HOM05D001151 ORTHO05D001504 5.4e-06 54.3 73 47.9
Actinidia40229 Actinidia chinensis HOM05D001151 ORTHO05D001504 5.4e-06 54.3 55 54.5
Carub.0007s2617 Capsella rubella HOM05D001151 ORTHO05D001504 5.4e-06 54.3 51 58.8
PGR031G2659 Punica granatum HOM05D001151 ORTHO05D001504 5.4e-06 54.3 75 46.7
EL10Ac7g17030 Beta vulgaris HOM05D001151 ORTHO05D001504 7.1e-06 53.9 56 50.0
Glyma.15G097400 Glycine max HOM05D001151 ORTHO05D001504 7.1e-06 53.9 80 45.0
PGSC0003DMG400022677 Solanum tuberosum HOM05D001151 ORTHO05D001504 7.1e-06 53.9 56 50.0
AL7G39800 Arabidopsis lyrata HOM05D001151 ORTHO05D001504 9.3e-06 53.5 51 56.9
Psat4g030560 Pisum sativum HOM05D001151 ORTHO05D001504 9.3e-06 53.5 76 40.8
Sp7g13880 Schrenkiella parvula HOM05D001151 ORTHO05D001504 9.3e-06 53.5 51 56.9
Thecc.04G278300 Theobroma cacao HOM05D001151 ORTHO05D001504 9.3e-06 53.5 61 45.9


User provided reference genes

Program Settings