Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 8.2e-76 287.0 144 100.0
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 2.1e-39 166.0 127 66.9
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.1e-39 166.0 129 65.9
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 3.1e-38 162.2 140 62.1
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 6.8e-38 161.0 130 63.1
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.5e-37 159.8 140 60.7
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.5e-37 159.8 140 61.4
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 3.4e-37 158.7 129 63.6
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 5.8e-37 157.9 129 63.6
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 7.5e-37 157.5 128 62.5
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 9.9e-37 157.1 125 65.6
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 1.3e-36 156.8 126 63.5
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 1.3e-36 156.8 135 60.0
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 1.7e-36 156.4 126 62.7
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 2.2e-36 156.0 125 64.0
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.2e-36 156.0 136 60.3
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 2.9e-36 155.6 128 63.3
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.9e-36 155.6 125 62.4
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 2.9e-36 155.6 132 60.6
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 3.7e-36 155.2 130 60.8
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 4.9e-36 154.8 130 60.8
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 6.4e-36 154.5 125 63.2
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 8.3e-36 154.1 127 63.0
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 8.3e-36 154.1 139 58.3
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 8.3e-36 154.1 139 58.3
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 8.3e-36 154.1 145 59.3
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 1.1e-35 153.7 125 62.4
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 1.4e-35 153.3 125 63.2
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 1.9e-35 152.9 138 57.2
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 2.4e-35 152.5 141 60.3
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 3.2e-35 152.1 132 59.1
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 3.2e-35 152.1 125 61.6
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 4.1e-35 151.8 117 66.7
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 4.1e-35 151.8 127 60.6
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 1.2e-34 150.2 128 60.2
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 1.2e-34 150.2 134 59.0
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 1.6e-34 149.8 125 60.0
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.6e-34 149.8 134 57.5
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 2.1e-34 149.4 124 59.7
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.1e-34 149.4 125 61.6
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 2.7e-34 149.1 129 59.7
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 2.7e-34 149.1 126 61.9
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 2.7e-34 149.1 127 60.6
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 3.5e-34 148.7 123 60.2
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 4.6e-34 148.3 139 57.6
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 4.6e-34 148.3 125 59.2
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 6.0e-34 147.9 129 61.2
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 6.0e-34 147.9 125 59.2
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 7.8e-34 147.5 125 56.8
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 7.8e-34 147.5 124 61.3
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 1.0e-33 147.1 125 61.6
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 1.3e-33 146.7 141 54.6
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 1.3e-33 146.7 121 60.3
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 1.7e-33 146.4 125 57.6
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 1.7e-33 146.4 125 59.2
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 2.3e-33 146.0 125 60.0
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 3.9e-33 145.2 125 59.2
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 8.6e-33 144.1 123 58.5
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 1.1e-32 143.7 136 58.1
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.1e-32 143.7 113 65.5
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 1.5e-32 143.3 125 57.6
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 2.5e-32 142.5 123 57.7
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 2.5e-32 142.5 131 55.7
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 2.5e-32 142.5 130 58.5
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 3.3e-32 142.1 129 59.7
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 3.3e-32 142.1 130 54.6
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 4.3e-32 141.7 131 52.7
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 4.3e-32 141.7 129 55.0
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 9.5e-32 140.6 126 57.9
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 1.6e-31 139.8 120 58.3
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 1.6e-31 139.8 120 59.2
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 2.1e-31 139.4 126 57.1
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 2.1e-31 139.4 130 53.8
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 2.1e-31 139.4 123 58.5
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 3.6e-31 138.7 132 53.0
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 4.7e-31 138.3 128 52.3
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 8.1e-31 137.5 135 53.3
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 1.1e-30 137.1 134 56.0
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 1.1e-30 137.1 132 52.3
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 1.4e-30 136.7 131 55.7
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 1.4e-30 136.7 135 53.3
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 1.4e-30 136.7 135 53.3
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 1.8e-30 136.3 131 54.2
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 1.8e-30 136.3 131 54.2
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 2.4e-30 136.0 131 55.0
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 4.0e-30 135.2 131 55.7
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 4.0e-30 135.2 167 46.7
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 4.0e-30 135.2 128 55.5
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 6.8e-30 134.4 131 53.4
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 1.2e-29 133.7 126 55.6
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 3.4e-29 132.1 128 53.9
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 4.4e-29 131.7 128 54.7
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 4.4e-29 131.7 136 51.5
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 7.6e-29 131.0 124 55.6
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 7.6e-29 131.0 120 53.3
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 7.6e-29 131.0 137 52.6
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.2e-28 129.4 126 53.2
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 4.9e-28 128.3 113 59.3
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 8.4e-28 127.5 133 46.6
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 1.1e-27 127.1 121 53.7
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 1.1e-27 127.1 121 53.7
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 1.1e-27 127.1 121 53.7
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.4e-27 126.7 113 55.8
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 1.6e-26 123.2 135 47.4
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 4.6e-26 121.7 129 50.4
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 2.5e-24 115.9 121 50.4
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 3.6e-23 112.1 131 45.8
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 2.4e-22 109.4 103 55.3
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 2.4e-22 109.4 103 55.3
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 2.4e-19 99.4 121 44.6
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 7.1e-19 97.8 96 49.0
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 7.1e-19 97.8 63 76.2
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.1e-18 96.3 90 54.4
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 7.8e-18 94.4 120 42.5
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.9e-17 92.0 93 49.5
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 1.1e-16 90.5 113 41.6
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 2.1e-15 86.3 78 56.4
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.3e-12 77.0 132 39.4
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 2.2e-12 76.3 124 36.3
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.4e-11 73.6 63 58.7
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 3.2e-11 72.4 108 42.6
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 6.7e-09 64.7 36 86.1
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 3.3e-08 62.4 48 62.5
arahy.Tifrunner.gnm1.ann1.LB6QPX Arachis hypogaea HOM05D006081 ORTHO05D007628 2.1e-07 59.7 44 63.6
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 5.3e-06 55.1 36 72.2


User provided reference genes

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