Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0706G060 Amborella trichopoda HOM05D005280 ORTHO05D006253 2.0e-58 230.3 243 100.0
Mapoly0030s0014 Marchantia polymorpha HOM05D005280 ORTHO05D006253 1.5e-34 151.0 111 62.2
Aqoxy170s003 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 4.5e-34 149.4 112 63.4
Aqoxy7G03216 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 4.5e-34 149.4 112 63.4
AagrBONN_evm.TU.Sc2ySwM_117.3414 Anthoceros agrestis HOM05D005280 ORTHO05D006253 1.0e-33 148.3 111 62.2
SEGI_31924 Sequoiadendron giganteum HOM05D005280 ORTHO05D006253 1.0e-33 148.3 108 63.9
TAR629G2088 Trochodendron aralioides HOM05D005280 ORTHO05D006253 1.0e-33 148.3 112 63.4
MBI05_g10770_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 1.7e-33 147.5 112 64.3
MBI07_g43934_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 2.9e-33 146.7 112 64.3
Nn1g04427 Nelumbo nucifera HOM05D005280 ORTHO05D006253 2.9e-33 146.7 112 61.6
CDE10G0374 Ceratophyllum demersum HOM05D005280 ORTHO05D006253 3.8e-33 146.4 112 64.3
Pp3c17_8040 Physcomitrium patens HOM05D005280 ORTHO05D006253 6.4e-33 145.6 111 61.3
Dinv16775 Davidia involucrata HOM05D005280 ORTHO05D006253 3.2e-32 143.3 112 64.3
Dinv40681 Davidia involucrata HOM05D005280 ORTHO05D006253 5.5e-32 142.5 112 62.5
Rhsim02G0143200 Rhododendron simsii HOM05D005280 ORTHO05D006253 5.5e-32 142.5 111 63.1
ClCG01G023770 Citrullus lanatus HOM05D005280 ORTHO05D006253 1.6e-31 141.0 112 61.6
CsaV3_6G050930 Cucumis sativus L. HOM05D005280 ORTHO05D006253 1.6e-31 141.0 112 61.6
vmacro16064 Vaccinium macrocarpon HOM05D005280 ORTHO05D006253 1.6e-31 141.0 112 62.5
Actinidia39510 Actinidia chinensis HOM05D005280 ORTHO05D006253 2.7e-31 140.2 112 62.5
CSS0022801 Camellia sinensis var. sinensis HOM05D005280 ORTHO05D006253 2.7e-31 140.2 112 60.7
MELO3C007211.2 Cucumis melo HOM05D005280 ORTHO05D006253 3.5e-31 139.8 112 60.7
Hma1.2p1_1912F.1_g307320 Hydrangea macrophylla HOM05D005280 ORTHO05D006253 3.5e-31 139.8 112 61.6
Sed0011601 Sechium edule HOM05D005280 ORTHO05D006253 4.6e-31 139.4 112 61.6
PRCOL_00004365 Prasinoderma coloniale HOM05D005280 ORTHO05D006253 6.0e-31 139.0 106 61.3
Ciclev10015974m.g Citrus clementina HOM05D005280 ORTHO05D006253 1.0e-30 138.3 113 61.1
DCAR_007943 Daucus carota HOM05D005280 ORTHO05D006253 1.0e-30 138.3 112 62.5
HPP92_008751 Vanilla planifolia HOM05D005280 ORTHO05D006253 1.0e-30 138.3 112 59.8
THA.LOC104804949 Tarenaya hassleriana HOM05D005280 ORTHO05D006253 2.3e-30 137.1 113 59.3
ECA236G4327 Erigeron canadensis HOM05D005280 ORTHO05D006253 3.0e-30 136.7 112 59.8
Sp1g25120 Schrenkiella parvula HOM05D005280 ORTHO05D006253 3.0e-30 136.7 113 59.3
Aa31LG6G6330 Aethionema arabicum HOM05D005280 ORTHO05D006253 3.9e-30 136.3 113 58.4
BcaC01g00082 Brassica carinata HOM05D005280 ORTHO05D006253 3.9e-30 136.3 113 58.4
C03p75590 Brassica napus HOM05D005280 ORTHO05D006253 3.9e-30 136.3 113 58.4
BolC3t19816H Brassica oleracea HOM05D005280 ORTHO05D006253 3.9e-30 136.3 113 58.4
Thhalv10008237m.g Eutrema salsugineum HOM05D005280 ORTHO05D006253 5.1e-30 136.0 113 59.3
FvH4_3g07730 Fragaria vesca HOM05D005280 ORTHO05D006253 5.1e-30 136.0 115 60.9
FAN16G3700 Fragaria x ananassa HOM05D005280 ORTHO05D006253 5.1e-30 136.0 115 60.9
FAN25G0161 Fragaria x ananassa HOM05D005280 ORTHO05D006253 5.1e-30 136.0 115 60.9
FAN21G3704 Fragaria x ananassa HOM05D005280 ORTHO05D006253 6.7e-30 135.6 115 60.0
Lj1A206T60 Lonicera japonica HOM05D005280 ORTHO05D006253 6.7e-30 135.6 113 58.4
Atru.chr10.1658 Acer truncatum HOM05D005280 ORTHO05D006253 8.7e-30 135.2 113 60.2
BcaB03g12145 Brassica carinata HOM05D005280 ORTHO05D006253 8.7e-30 135.2 113 59.3
BraA08t34477Z Brassica rapa HOM05D005280 ORTHO05D006253 8.7e-30 135.2 113 57.5
BcaB07g32507 Brassica carinata HOM05D005280 ORTHO05D006253 1.1e-29 134.8 113 57.5
BcaC05g26943 Brassica carinata HOM05D005280 ORTHO05D006253 1.1e-29 134.8 113 57.5
A09p37140 Brassica napus HOM05D005280 ORTHO05D006253 1.1e-29 134.8 113 57.5
C05p27910 Brassica napus HOM05D005280 ORTHO05D006253 1.1e-29 134.8 113 57.5
BolC5t31517H Brassica oleracea HOM05D005280 ORTHO05D006253 1.1e-29 134.8 113 57.5
BraA09t39230Z Brassica rapa HOM05D005280 ORTHO05D006253 1.1e-29 134.8 113 57.5
CARHR028510 Cardamine hirsuta HOM05D005280 ORTHO05D006253 1.1e-29 134.8 113 58.4
FAN11G1284 Fragaria x ananassa HOM05D005280 ORTHO05D006253 1.1e-29 134.8 115 60.9
THA.LOC104812639 Tarenaya hassleriana HOM05D005280 ORTHO05D006253 1.1e-29 134.8 112 59.8
HanXRQChr05g0139841 Helianthus annuus HOM05D005280 ORTHO05D006253 1.5e-29 134.4 112 58.9
RcHm_v2.0_Chr5g0010881 Rosa chinensis HOM05D005280 ORTHO05D006253 1.5e-29 134.4 116 59.5
Lsat_1_v5_gn_7_24160 Lactuca sativa HOM05D005280 ORTHO05D006253 2.5e-29 133.7 112 57.1
PSO229G0003 Papaver somniferum HOM05D005280 ORTHO05D006253 2.5e-29 133.7 113 59.3
Carub.0001s2739 Capsella rubella HOM05D005280 ORTHO05D006253 3.3e-29 133.3 113 57.5
CiPaw.10G059400 Carya illinoinensis HOM05D005280 ORTHO05D006253 3.3e-29 133.3 114 60.5
Lj6g0027668 Lotus japonicus HOM05D005280 ORTHO05D006253 3.3e-29 133.3 114 59.6
Peaxi162Scf00871g00047 Petunia axillaris HOM05D005280 ORTHO05D006253 3.3e-29 133.3 112 58.0
Prupe.4G062000 Prunus persica HOM05D005280 ORTHO05D006253 3.3e-29 133.3 120 57.5
Sabra04G0037300 Salix brachista HOM05D005280 ORTHO05D006253 3.3e-29 133.3 114 59.6
PGSC0003DMG400008719 Solanum tuberosum HOM05D005280 ORTHO05D006253 4.3e-29 132.9 112 57.1
CANSAT80G2107 Cannabis sativa HOM05D005280 ORTHO05D006253 5.6e-29 132.5 114 60.5
QL05p047377 Quercus lobata HOM05D005280 ORTHO05D006253 5.6e-29 132.5 114 57.9
PGSC0003DMG400009000 Solanum tuberosum HOM05D005280 ORTHO05D006253 5.6e-29 132.5 112 55.4
Ah.01g013480 Amaranthus hybridus HOM05D005280 ORTHO05D006253 7.4e-29 132.1 115 58.3
AUR62017603 Chenopodium quinoa HOM05D005280 ORTHO05D006253 7.4e-29 132.1 115 58.3
PSO675G8759 Papaver somniferum HOM05D005280 ORTHO05D006253 7.4e-29 132.1 113 58.4
Potri.004G057600 Populus trichocarpa HOM05D005280 ORTHO05D006253 7.4e-29 132.1 114 58.8
AT1G29260 Arabidopsis thaliana HOM05D005280 ORTHO05D006253 9.6e-29 131.7 113 57.5
Manes.16G040400 Manihot esculenta HOM05D005280 ORTHO05D006253 9.6e-29 131.7 114 59.6
PGR042G3394 Punica granatum HOM05D005280 ORTHO05D006253 9.6e-29 131.7 114 58.8
Thecc.06G170100 Theobroma cacao HOM05D005280 ORTHO05D006253 9.6e-29 131.7 113 59.3
AL1G42940 Arabidopsis lyrata HOM05D005280 ORTHO05D006253 1.3e-28 131.3 113 57.5
AUR62015144 Chenopodium quinoa HOM05D005280 ORTHO05D006253 1.3e-28 131.3 115 58.3
Cc02_g15040 Coffea canephora HOM05D005280 ORTHO05D006253 1.3e-28 131.3 117 54.7
Manes.17G056200 Manihot esculenta HOM05D005280 ORTHO05D006253 1.3e-28 131.3 114 59.6
Solyc03g062940.3 Solanum lycopersicum HOM05D005280 ORTHO05D006253 1.3e-28 131.3 112 56.2
Sopen03g015240 Solanum pennellii HOM05D005280 ORTHO05D006253 1.3e-28 131.3 112 56.2
TWI38G0304 Tripterygium wilfordii HOM05D005280 ORTHO05D006253 1.3e-28 131.3 115 58.3
CBR_g23503 Chara braunii HOM05D005280 ORTHO05D006253 1.6e-28 131.0 106 60.4
Lalb_Chr20g0117481 Lupinus albus HOM05D005280 ORTHO05D006253 2.8e-28 130.2 115 55.7
MD10G1279400 Malus domestica HOM05D005280 ORTHO05D006253 2.8e-28 130.2 120 55.8
arahy.Tifrunner.gnm1.ann1.8U8ZZM Arachis hypogaea HOM05D005280 ORTHO05D006253 3.7e-28 129.8 114 58.8
arahy.Tifrunner.gnm1.ann1.IM81E3 Arachis hypogaea HOM05D005280 ORTHO05D006253 3.7e-28 129.8 114 58.8
MD05G1300300 Malus domestica HOM05D005280 ORTHO05D006253 3.7e-28 129.8 122 56.6
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 3.7e-28 129.8 112 53.6
Pp3c15_2410 Physcomitrium patens HOM05D005280 ORTHO05D006253 3.7e-28 129.8 99 59.6
Gohir.A10G036800 Gossypium hirsutum HOM05D005280 ORTHO05D006253 4.8e-28 129.4 113 57.5
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 4.8e-28 129.4 112 53.6
Sc05g0007070 Simmondsia chinensis HOM05D005280 ORTHO05D006253 4.8e-28 129.4 114 58.8
CAN.G206.30 Capsicum annuum HOM05D005280 ORTHO05D006253 6.2e-28 129.0 112 54.5
Cfa000612 Carpinus fangiana HOM05D005280 ORTHO05D006253 6.2e-28 129.0 114 59.6
Duzib160G0285 Durio zibethinus HOM05D005280 ORTHO05D006253 6.2e-28 129.0 113 57.5
Glyma.13G229400 Glycine max HOM05D005280 ORTHO05D006253 6.2e-28 129.0 114 57.0
SMO119G0322 Selaginella moellendorffii HOM05D005280 ORTHO05D006253 1.1e-27 128.3 112 56.2
Phvul.006G175800 Phaseolus vulgaris HOM05D005280 ORTHO05D006253 1.4e-27 127.9 114 56.1
COL.COLO4_31288 Corchorus olitorius HOM05D005280 ORTHO05D006253 1.8e-27 127.5 113 56.6
EL10Ac9g22853 Beta vulgaris HOM05D005280 ORTHO05D006253 2.4e-27 127.1 114 57.9
Gohir.D10G037400 Gossypium hirsutum HOM05D005280 ORTHO05D006253 2.4e-27 127.1 113 55.8
Gorai.011G039400 Gossypium raimondii HOM05D005280 ORTHO05D006253 2.4e-27 127.1 113 55.8
Haze_06226 Corylus avellana HOM05D005280 ORTHO05D006253 3.1e-27 126.7 114 58.8
Medtr2g016160 Medicago truncatula HOM05D005280 ORTHO05D006253 3.1e-27 126.7 114 55.3
Psat1g197880 Pisum sativum HOM05D005280 ORTHO05D006253 3.1e-27 126.7 114 54.4
SHI28515 Sapria himalayana HOM05D005280 ORTHO05D006253 3.1e-27 126.7 114 57.9
Glyma.15G083100 Glycine max HOM05D005280 ORTHO05D006253 4.0e-27 126.3 115 56.5
Duzib192G0183 Durio zibethinus HOM05D005280 ORTHO05D006253 6.9e-27 125.6 116 55.2
VMungo0540G1202 Vigna mungo HOM05D005280 ORTHO05D006253 6.9e-27 125.6 114 56.1
Ca_00439_v3 Cicer arietinum L. HOM05D005280 ORTHO05D006253 9.0e-27 125.2 114 55.3
MSTRG.7412 Avicennia marina HOM05D005280 ORTHO05D006253 1.2e-26 124.8 111 54.1
Migut.M01035 Erythranthe guttata HOM05D005280 ORTHO05D006253 1.5e-26 124.4 111 54.1
SGA_v2.0_scaffold1G00053 Striga asiatica HOM05D005280 ORTHO05D006253 1.5e-26 124.4 111 54.1
unitig_699.g19366 Utricularia gibba HOM05D005280 ORTHO05D006253 7.6e-26 122.1 111 54.1
Aqoxy1G02047 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 1.3e-25 121.3 95 61.1
Cre17.g730200 Chlamydomonas reinhardtii HOM05D005280 ORTHO05D006253 2.5e-24 117.1 104 56.7
Zm00001eb238680 Zea mays HOM05D005280 ORTHO05D006253 1.2e-23 114.8 115 50.4
MCO15G120 Micromonas commoda HOM05D005280 ORTHO05D006253 2.1e-23 114.0 110 51.8
A08p25250 Brassica napus HOM05D005280 ORTHO05D006253 1.0e-22 111.7 82 64.6
PSO782G3364 Papaver somniferum HOM05D005280 ORTHO05D006253 2.5e-13 80.5 86 47.7
Cpa.g.sc7.74 Carica papaya HOM05D005280 ORTHO05D006253 5.9e-10 69.3 111 36.9
Sabra11G0048200 Salix brachista HOM05D005280 ORTHO05D006253 3.6e-07 60.1 59 47.5


User provided reference genes

Program Settings