Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 4.8e-64 248.1 131 100.0
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 5.9e-30 134.8 108 69.4
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 7.7e-30 134.4 106 70.8
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 2.9e-29 132.5 104 68.3
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 6.6e-29 131.3 102 67.6
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 5.5e-28 128.3 117 60.7
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 9.5e-28 127.5 104 66.3
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 1.6e-27 126.7 115 64.3
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 2.1e-27 126.3 116 62.1
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 3.6e-27 125.6 115 60.0
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 4.7e-27 125.2 81 75.3
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 4.7e-27 125.2 102 64.7
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 6.1e-27 124.8 108 62.0
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 8.0e-27 124.4 100 67.0
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 1.0e-26 124.0 103 68.0
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 1.0e-26 124.0 117 61.5
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 1.4e-26 123.6 107 65.4
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 1.8e-26 123.2 117 59.8
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 1.8e-26 123.2 121 57.9
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 2.3e-26 122.9 111 61.3
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 4.0e-26 122.1 105 64.8
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 4.0e-26 122.1 105 64.8
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 5.2e-26 121.7 102 65.7
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 5.2e-26 121.7 103 68.0
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 6.8e-26 121.3 104 65.4
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 6.8e-26 121.3 104 59.6
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 8.9e-26 120.9 118 57.6
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 8.9e-26 120.9 109 61.5
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.2e-25 120.6 113 61.1
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 1.2e-25 120.6 113 61.1
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 1.2e-25 120.6 104 64.4
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 1.2e-25 120.6 114 60.5
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 1.5e-25 120.2 121 62.0
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 4.4e-25 118.6 105 61.9
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 5.7e-25 118.2 113 60.2
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 5.7e-25 118.2 105 58.1
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 7.5e-25 117.9 110 59.1
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 9.8e-25 117.5 120 54.2
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 1.3e-24 117.1 120 51.7
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 1.7e-24 116.7 86 69.8
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 2.2e-24 116.3 111 59.5
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 2.2e-24 116.3 103 63.1
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 2.2e-24 116.3 103 65.0
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 2.2e-24 116.3 115 59.1
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 2.2e-24 116.3 120 51.7
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 2.2e-24 116.3 110 58.2
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 2.8e-24 115.9 109 58.7
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 2.8e-24 115.9 123 56.9
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 2.8e-24 115.9 118 57.6
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 3.7e-24 115.5 106 55.7
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 4.9e-24 115.2 103 61.2
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 6.3e-24 114.8 105 62.9
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 6.3e-24 114.8 117 58.1
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 6.3e-24 114.8 117 58.1
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 6.3e-24 114.8 109 60.6
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 8.3e-24 114.4 102 61.8
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 1.1e-23 114.0 107 62.6
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 1.4e-23 113.6 113 57.5
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 1.4e-23 113.6 106 58.5
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 1.4e-23 113.6 124 56.5
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.4e-23 113.6 124 56.5
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.4e-23 113.6 124 56.5
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 1.8e-23 113.2 114 57.9
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.8e-23 113.2 124 56.5
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 2.4e-23 112.8 123 55.3
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 3.2e-23 112.5 109 59.6
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 3.2e-23 112.5 109 56.0
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 5.4e-23 111.7 124 55.6
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 5.4e-23 111.7 110 60.9
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 5.4e-23 111.7 104 61.5
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 7.0e-23 111.3 102 60.8
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 7.0e-23 111.3 104 57.7
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 9.2e-23 110.9 101 57.4
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 9.2e-23 110.9 102 60.8
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 9.2e-23 110.9 109 55.0
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 9.2e-23 110.9 111 57.7
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 9.2e-23 110.9 128 53.1
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 1.2e-22 110.5 111 57.7
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 1.2e-22 110.5 84 66.7
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 1.6e-22 110.2 104 58.7
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 1.6e-22 110.2 114 56.1
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 1.6e-22 110.2 109 57.8
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 2.0e-22 109.8 110 59.1
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 2.7e-22 109.4 110 58.2
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 2.7e-22 109.4 85 63.5
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 3.5e-22 109.0 101 58.4
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 3.5e-22 109.0 119 53.8
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 3.5e-22 109.0 103 57.3
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 3.5e-22 109.0 103 57.3
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 3.5e-22 109.0 116 53.4
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 4.5e-22 108.6 110 58.2
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 4.5e-22 108.6 111 56.8
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 4.5e-22 108.6 111 56.8
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 4.5e-22 108.6 110 57.3
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 5.9e-22 108.2 110 58.2
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 7.8e-22 107.8 116 52.6
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 3.9e-21 105.5 81 66.7
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 6.6e-21 104.8 121 52.9
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 1.5e-20 103.6 108 52.8
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 1.9e-20 103.2 87 62.1
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 2.5e-20 102.8 119 56.3
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.2e-19 100.5 95 60.0
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.6e-19 100.1 80 66.2
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 1.6e-19 100.1 87 60.9
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 2.6e-17 92.8 121 51.2
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 4.9e-16 88.6 54 74.1
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 6.4e-16 88.2 72 65.3
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 8.3e-16 87.8 116 49.1
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 1.9e-15 86.7 86 59.3
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 7.8e-14 81.3 82 57.3
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 1.7e-13 80.1 82 52.4
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 6.2e-11 71.6 44 75.0
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 6.2e-11 71.6 111 45.0
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 6.2e-11 71.6 111 45.0
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.2e-08 63.2 124 39.5
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 7.1e-07 58.2 57 59.6


User provided reference genes

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