Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0705G202 Amborella trichopoda HOM05D000225 ORTHO05D062383 2.4e-60 235.3 119 100.0
MBI04_g37499_MAGBIO Magnolia biondii HOM05D000225 ORTHO05D002520 1.5e-19 99.8 112 47.3
Cfa003642 Carpinus fangiana HOM05D000225 ORTHO05D002520 1.1e-17 93.6 115 43.5
Haze_15852 Corylus avellana HOM05D000225 ORTHO05D002520 1.9e-17 92.8 115 43.5
Hma1.2p1_1232F.1_g268940 Hydrangea macrophylla HOM05D000225 ORTHO05D002520 3.6e-16 88.6 117 38.5
QL05p019833 Quercus lobata HOM05D000225 ORTHO05D002520 7.9e-16 87.4 112 41.1
CiPaw.02G145600 Carya illinoinensis HOM05D000225 ORTHO05D002520 1.4e-15 86.7 113 39.8
Hund00696 Selenicereus undatus HOM05D000225 ORTHO05D002520 1.4e-15 86.7 114 39.5
Cc04_g02520 Coffea canephora HOM05D000225 ORTHO05D002520 2.3e-15 85.9 112 39.3
Sabra01G0151800 Salix brachista HOM05D000225 ORTHO05D002520 2.3e-15 85.9 112 40.2
TWI75G0519 Tripterygium wilfordii HOM05D000225 ORTHO05D002520 2.3e-15 85.9 111 37.8
Gorai.003G061600 Gossypium raimondii HOM05D000225 ORTHO05D002520 3.0e-15 85.5 111 37.8
GSVIVG01016975001 Vitis vinifera HOM05D000225 ORTHO05D002520 3.0e-15 85.5 113 38.9
Thecc.06G100400 Theobroma cacao HOM05D000225 ORTHO05D002520 3.9e-15 85.1 112 38.4
CSS0007964 Camellia sinensis var. sinensis HOM05D000225 ORTHO05D002520 6.7e-15 84.3 112 38.4
Gohir.D03G057800 Gossypium hirsutum HOM05D000225 ORTHO05D002520 8.8e-15 84.0 111 37.8
CDE05G1507 Ceratophyllum demersum HOM05D000225 ORTHO05D002520 2.0e-14 82.8 116 39.7
CiPaw.01G231100 Carya illinoinensis HOM05D000225 ORTHO05D002520 2.5e-14 82.4 107 40.2
TWI18G1389 Tripterygium wilfordii HOM05D000225 ORTHO05D002520 2.5e-14 82.4 115 36.5
CSS0039164 Camellia sinensis var. sinensis HOM05D000225 ORTHO05D002520 3.3e-14 82.0 117 37.6
Rhsim08G0227900 Rhododendron simsii HOM05D000225 ORTHO05D002520 3.3e-14 82.0 112 39.3
vmacro18849 Vaccinium macrocarpon HOM05D000225 ORTHO05D002520 3.3e-14 82.0 111 36.9
CSS0022779 Camellia sinensis var. sinensis HOM05D000225 ORTHO05D002520 4.3e-14 81.6 93 40.9
Duzib235G1437 Durio zibethinus HOM05D000225 ORTHO05D002520 4.3e-14 81.6 112 35.7
Eucgr.J02935 Eucalyptus grandis HOM05D000225 ORTHO05D002520 4.3e-14 81.6 112 37.5
TAR636G1254 Trochodendron aralioides HOM05D000225 ORTHO05D002520 7.4e-14 80.9 112 41.1
Nn8g39069 Nelumbo nucifera HOM05D000225 ORTHO05D002520 9.7e-14 80.5 112 38.4
Aqoxy7G03979 Aquilegia oxysepala HOM05D000225 ORTHO05D002520 1.3e-13 80.1 114 38.6
TAR383G0597 Trochodendron aralioides HOM05D000225 ORTHO05D002520 1.3e-13 80.1 114 39.5
Nitab4.5_0004969g0020 Nicotiana tabacum HOM05D000225 ORTHO05D002520 2.8e-13 79.0 115 36.5
arahy.Tifrunner.gnm1.ann1.ULK9GC Arachis hypogaea HOM05D000225 ORTHO05D002520 6.3e-13 77.8 112 39.3
Nitab4.5_0008646g0010 Nicotiana tabacum HOM05D000225 ORTHO05D002520 1.1e-12 77.0 115 35.7
Potri.001G190200 Populus trichocarpa HOM05D000225 ORTHO05D002520 1.4e-12 76.6 112 40.2
Actinidia32101 Actinidia chinensis HOM05D000225 ORTHO05D002520 4.1e-12 75.1 112 36.6
Gohir.A02G117300 Gossypium hirsutum HOM05D000225 ORTHO05D002520 5.3e-12 74.7 94 36.2
Dinv37974 Davidia involucrata HOM05D000225 ORTHO05D002520 9.1e-12 73.9 118 37.3
Lj3g0014594 Lotus japonicus HOM05D000225 ORTHO05D002520 9.1e-12 73.9 119 37.0
HPP92_005561 Vanilla planifolia HOM05D000225 ORTHO05D002520 9.1e-12 73.9 115 35.7
Migut.I00894 Erythranthe guttata HOM05D000225 ORTHO05D002520 2.0e-11 72.8 114 34.2
Medtr8g014500 Medicago truncatula HOM05D000225 ORTHO05D002520 2.0e-11 72.8 119 37.0
Ca_23264_v3 Cicer arietinum L. HOM05D000225 ORTHO05D002520 2.6e-11 72.4 117 37.6
Ca_23273_v3 Cicer arietinum L. HOM05D000225 ORTHO05D002520 2.6e-11 72.4 117 37.6
Solyc03g121050.3 Solanum lycopersicum HOM05D000225 ORTHO05D002520 3.4e-11 72.0 115 37.4
Sopen03g039880 Solanum pennellii HOM05D000225 ORTHO05D002520 4.5e-11 71.6 115 37.4
CDE05G0616 Ceratophyllum demersum HOM05D000225 ORTHO05D002520 5.9e-11 71.2 113 36.3
Phvul.010G145100 Phaseolus vulgaris HOM05D000225 ORTHO05D002520 5.9e-11 71.2 119 33.6
SEGI_31176 Sequoiadendron giganteum HOM05D000225 ORTHO05D002520 5.9e-11 71.2 118 35.6
Lalb_Chr01g0013171 Lupinus albus HOM05D000225 ORTHO05D002520 7.7e-11 70.9 115 36.5
EL10Ac9g21192 Beta vulgaris HOM05D000225 ORTHO05D002520 1.0e-10 70.5 118 34.7
Glyma.08G200800 Glycine max HOM05D000225 ORTHO05D002520 1.0e-10 70.5 119 33.6
PGSC0003DMG400002526 Solanum tuberosum HOM05D000225 ORTHO05D002520 1.3e-10 70.1 115 36.5
Psat4g197320 Pisum sativum HOM05D000225 ORTHO05D002520 2.2e-10 69.3 117 35.9
TPR.G26942 Trifolium pratense HOM05D000225 ORTHO05D002520 3.8e-10 68.6 119 36.1
AUR62031926 Chenopodium quinoa HOM05D000225 ORTHO05D002520 5.0e-10 68.2 118 33.9
Ciclev10025091m.g Citrus clementina HOM05D000225 ORTHO05D002520 5.0e-10 68.2 111 33.3
ClCG07G013330 Citrullus lanatus HOM05D000225 ORTHO05D002520 6.5e-10 67.8 119 37.0
VMungo0331G1972 Vigna mungo HOM05D000225 ORTHO05D002520 6.5e-10 67.8 119 32.8
SalBow2G2057 Salvia bowleyana HOM05D000225 ORTHO05D002520 8.5e-10 67.4 94 35.1
Zm00001eb153700 Zea mays HOM05D000225 ORTHO05D002520 1.1e-09 67.0 95 36.8
Glyma.07G015300 Glycine max HOM05D000225 ORTHO05D002520 1.9e-09 66.2 119 31.9
PGR102G3202 Punica granatum HOM05D000225 ORTHO05D002520 1.9e-09 66.2 111 35.1
DCAR_007585 Daucus carota HOM05D000225 ORTHO05D002520 2.5e-09 65.9 111 34.2
FvH4_6g32430 Fragaria vesca HOM05D000225 ORTHO05D002520 2.5e-09 65.9 118 33.9
MD09G1202500 Malus domestica HOM05D000225 ORTHO05D002520 2.5e-09 65.9 112 32.1
Peaxi162Scf00038g01033 Petunia axillaris HOM05D000225 ORTHO05D002520 4.2e-09 65.1 116 35.3
MELO3C013002.2 Cucumis melo HOM05D000225 ORTHO05D002520 5.5e-09 64.7 119 36.1
CAN.G1143.16 Capsicum annuum HOM05D000225 ORTHO05D002520 7.2e-09 64.3 115 37.4
CsaV3_3G023580 Cucumis sativus L. HOM05D000225 ORTHO05D002520 7.2e-09 64.3 119 36.1
Oeu017124.1 Olea europaea HOM05D000225 ORTHO05D002520 9.4e-09 63.9 114 36.0
MD17G1183700 Malus domestica HOM05D000225 ORTHO05D002520 1.2e-08 63.5 112 32.1
Atru.chr1.3531 Acer truncatum HOM05D000225 ORTHO05D002520 3.6e-08 62.0 112 34.8
Manes.04G134300 Manihot esculenta HOM05D000225 ORTHO05D002520 4.7e-08 61.6 97 36.1
Os01g0741200 Oryza sativa ssp. japonica HOM05D000225 ORTHO05D002520 7.9e-08 60.8 91 36.3
Sed0025043 Sechium edule HOM05D000225 ORTHO05D002520 7.9e-08 60.8 113 37.2
FAN05G1726 Fragaria x ananassa HOM05D000225 ORTHO05D002520 2.3e-07 59.3 118 31.4
FAN09G3147 Fragaria x ananassa HOM05D000225 ORTHO05D002520 5.1e-07 58.2 92 34.8
Lj3g0004102 Lotus japonicus HOM05D000225 ORTHO05D002520 5.1e-07 58.2 116 33.6
Ah.01g005780 Amaranthus hybridus HOM05D000225 ORTHO05D002520 6.7e-07 57.8 117 29.9
THA.LOC104817947 Tarenaya hassleriana HOM05D000225 ORTHO05D002520 6.7e-07 57.8 99 35.4
CANSAT01G1837 Cannabis sativa HOM05D000225 ORTHO05D002520 1.1e-06 57.0 111 30.6
Lalb_Chr25g0280171 Lupinus albus HOM05D000225 ORTHO05D002520 1.1e-06 57.0 115 30.4
Manes.11G033200 Manihot esculenta HOM05D000225 ORTHO05D002520 1.5e-06 56.6 116 32.8


User provided reference genes

Program Settings