Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 1.3e-111 406.4 208 100.0
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 1.7e-93 346.3 207 82.6
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.3e-90 336.7 207 80.2
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 3.8e-90 335.1 207 80.7
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.8e-90 335.1 207 80.7
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 8.5e-90 334.0 207 80.2
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.1e-89 333.6 207 80.2
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 3.2e-89 332.0 207 78.3
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 7.2e-89 330.9 207 79.2
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 9.4e-89 330.5 206 79.1
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 3.6e-88 328.6 208 76.4
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 4.7e-88 328.2 207 78.3
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 6.1e-88 327.8 207 77.8
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 8.0e-88 327.4 207 79.2
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.8e-87 326.2 208 78.8
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 3.9e-87 325.1 207 77.3
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 3.9e-87 325.1 207 76.8
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 5.2e-87 324.7 207 76.8
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 1.1e-86 323.6 207 76.8
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 2.0e-86 322.8 207 75.8
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 3.3e-86 322.0 207 76.8
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 9.7e-86 320.5 207 77.3
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.3e-85 320.1 207 75.4
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 1.3e-85 320.1 207 75.8
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 1.3e-85 320.1 207 76.3
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 2.2e-85 319.3 207 76.8
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 2.2e-85 319.3 207 75.4
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 3.7e-85 318.5 206 76.7
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 8.2e-85 317.4 207 76.8
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 8.2e-85 317.4 210 75.2
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 1.1e-84 317.0 207 75.8
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 1.1e-84 317.0 207 74.9
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 1.4e-84 316.6 207 73.4
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.8e-84 316.2 207 74.9
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.8e-84 316.2 207 74.4
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 2.4e-84 315.8 207 75.4
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 3.1e-84 315.5 207 72.9
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 4.1e-84 315.1 207 75.4
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 5.3e-84 314.7 206 74.8
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 5.3e-84 314.7 207 73.9
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 5.3e-84 314.7 207 74.4
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 7.0e-84 314.3 206 74.3
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 1.2e-83 313.5 207 75.4
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 2.0e-83 312.8 207 75.4
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 2.0e-83 312.8 207 75.4
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 3.5e-83 312.0 207 74.4
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 3.5e-83 312.0 207 72.5
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 3.5e-83 312.0 207 72.5
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 4.5e-83 311.6 207 73.4
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 4.5e-83 311.6 207 73.4
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 5.9e-83 311.2 207 72.5
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 7.7e-83 310.8 206 73.8
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 1.0e-82 310.5 207 72.0
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 1.0e-82 310.5 207 73.4
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 1.3e-82 310.1 207 73.4
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 2.2e-82 309.3 207 72.5
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 2.2e-82 309.3 207 72.5
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 5.0e-82 308.1 207 72.9
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 8.5e-82 307.4 207 72.0
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 1.5e-81 306.6 196 78.1
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 1.9e-81 306.2 206 72.8
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 2.5e-81 305.8 235 66.8
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 2.5e-81 305.8 235 66.8
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 4.2e-81 305.1 207 72.0
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 5.5e-81 304.7 207 71.0
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 1.2e-80 303.5 207 71.5
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 1.6e-80 303.1 207 71.5
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 1.6e-80 303.1 207 71.5
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 2.1e-80 302.8 192 76.0
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 2.7e-80 302.4 207 71.0
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 6.1e-80 301.2 207 71.0
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 6.1e-80 301.2 199 73.4
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 8.0e-80 300.8 192 77.6
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 8.0e-80 300.8 216 69.9
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.4e-79 300.1 207 71.0
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 1.8e-79 299.7 206 70.4
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 3.0e-79 298.9 197 75.1
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 4.0e-79 298.5 192 76.0
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 2.0e-78 296.2 192 75.0
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 2.6e-78 295.8 197 76.6
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 3.3e-78 295.4 192 74.0
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 9.7e-78 293.9 207 69.1
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 8.2e-77 290.8 207 73.4
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 1.1e-76 290.4 233 63.9
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 3.1e-76 288.9 233 63.5
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 9.1e-76 287.3 215 67.0
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 5.9e-75 284.6 208 67.8
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 2.9e-74 282.3 207 71.5
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.1e-73 280.4 207 68.6
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 9.4e-73 277.3 207 69.6
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 2.7e-72 275.8 192 68.8
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 3.6e-72 275.4 207 66.7
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 6.1e-72 274.6 208 65.9
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 2.6e-70 269.2 183 70.5
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.7e-67 259.2 170 78.2
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 1.2e-64 250.4 173 73.4
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 2.1e-64 249.6 173 72.8
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 6.1e-64 248.1 207 64.3
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 1.4e-63 246.9 222 61.3
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 9.8e-62 240.7 198 67.2
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 9.2e-60 234.2 154 79.2
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 8.0e-56 221.1 205 56.1
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 4.0e-55 218.8 137 83.2
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 2.2e-53 213.0 140 72.9
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 2.1e-48 196.4 141 72.3
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 3.6e-48 195.7 183 57.9
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 3.1e-47 192.6 138 72.5
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 3.0e-42 176.0 113 77.0
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 1.2e-38 164.1 118 69.5
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.7e-34 150.2 115 67.0
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 1.5e-33 147.1 136 61.0
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 1.2e-32 144.1 205 38.0
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 4.0e-31 139.0 106 66.0
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 9.2e-28 127.9 208 37.0
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 3.5e-27 125.9 197 35.0
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.3e-26 124.0 82 65.9
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 8.4e-21 104.8 101 58.4
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 8.4e-21 104.8 83 66.3
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 1.4e-20 104.0 101 57.4
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 7.1e-20 101.7 80 63.8
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 9.6e-17 91.3 70 55.7
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 2.4e-12 76.6 39 76.9


User provided reference genes

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