Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0705G084 Amborella trichopoda HOM05D007429 ORTHO05D003505 3.3e-44 181.4 96 100.0
Gohir.A05G046400 Gossypium hirsutum HOM05D007429 ORTHO05D003505 2.4e-10 68.9 90 51.1
Gorai.009G049400 Gossypium raimondii HOM05D007429 ORTHO05D003505 2.4e-10 68.9 90 51.1
Gohir.D05G048100 Gossypium hirsutum HOM05D007429 ORTHO05D003505 8.9e-10 67.0 90 50.0
Nn8g39115 Nelumbo nucifera HOM05D007429 ORTHO05D003505 4.4e-09 64.7 85 47.1
Thecc.09G045900 Theobroma cacao HOM05D007429 ORTHO05D003505 9.9e-09 63.5 88 51.1
GSVIVG01035615001 Vitis vinifera HOM05D007429 ORTHO05D003505 1.7e-08 62.8 86 47.7
Duzib168G1390 Durio zibethinus HOM05D007429 ORTHO05D003505 2.2e-08 62.4 86 48.8
Duzib187G1405 Durio zibethinus HOM05D007429 ORTHO05D003505 2.9e-08 62.0 87 48.3
Manes.16G075000 Manihot esculenta HOM05D007429 ORTHO05D003505 3.8e-08 61.6 86 50.0
Medtr3g109720 Medicago truncatula HOM05D007429 ORTHO05D003505 8.4e-08 60.5 86 47.7
Nn6g35292 Nelumbo nucifera HOM05D007429 ORTHO05D003505 1.4e-07 59.7 85 44.7
ATR0317G117 Amborella trichopoda HOM05D006762 ORTHO05D003505 1.9e-07 59.3 101 41.6
PGSC0003DMG402029142 Solanum tuberosum HOM05D007429 ORTHO05D003505 2.4e-07 58.9 85 45.9
Ciclev10010039m.g Citrus clementina HOM05D007429 ORTHO05D003505 3.2e-07 58.5 87 49.4
Lsat_1_v5_gn_6_22640 Lactuca sativa HOM05D007429 ORTHO05D003505 3.2e-07 58.5 85 44.7
Glyma.05G060100 Glycine max HOM05D006762 ORTHO05D003505 4.2e-07 58.2 80 43.8
Potri.006G237800 Populus trichocarpa HOM05D007429 ORTHO05D003505 4.2e-07 58.2 86 48.8
TPR.G15111 Trifolium pratense HOM05D007429 ORTHO05D003505 4.2e-07 58.2 86 47.7
Sopen08g020350 Solanum pennellii HOM05D007429 ORTHO05D003505 5.4e-07 57.8 85 44.7
Gohir.A08G249800 Gossypium hirsutum HOM05D007429 ORTHO05D003505 7.1e-07 57.4 89 50.6
AUR62042440 Chenopodium quinoa HOM05D007429 ORTHO05D003505 9.3e-07 57.0 89 46.1
Glyma.17G142500 Glycine max HOM05D006762 ORTHO05D003505 1.2e-06 56.6 81 43.2
Phvul.003G221200 Phaseolus vulgaris HOM05D006762 ORTHO05D003505 1.2e-06 56.6 87 41.4
Solyc08g066520.3 Solanum lycopersicum HOM05D007429 ORTHO05D003505 1.2e-06 56.6 85 43.5
CANSAT25G2095 Cannabis sativa HOM05D007429 ORTHO05D003505 1.6e-06 56.2 86 50.0
Dinv23374 Davidia involucrata HOM05D007429 ORTHO05D003505 1.6e-06 56.2 90 47.8
Lj1g0025254 Lotus japonicus HOM05D007429 ORTHO05D003505 1.6e-06 56.2 86 46.5
Manes.01G081200 Manihot esculenta HOM05D006762 ORTHO05D003505 1.6e-06 56.2 95 40.0
Sabra06G0186000 Salix brachista HOM05D007429 ORTHO05D003505 1.6e-06 56.2 86 47.7
CSS0002972 Camellia sinensis var. sinensis HOM05D007429 ORTHO05D003505 2.1e-06 55.8 85 43.5
HanXRQChr02g0050601 Helianthus annuus HOM05D007429 ORTHO05D003505 2.1e-06 55.8 88 46.6
AUR62009266 Chenopodium quinoa HOM05D007429 ORTHO05D003505 2.7e-06 55.5 89 44.9
CDE02G4418 Ceratophyllum demersum HOM05D007429 ORTHO05D003505 3.5e-06 55.1 85 44.7
FAN27G3027 Fragaria x ananassa HOM05D007429 ORTHO05D003505 4.6e-06 54.7 87 42.5
Atru.chr7.2081 Acer truncatum HOM05D007429 ORTHO05D003505 6.0e-06 54.3 90 46.7
Lalb_Chr09g0330061 Lupinus albus HOM05D006762 ORTHO05D003505 6.0e-06 54.3 85 45.9
EL10Ac2g04004 Beta vulgaris HOM05D007429 ORTHO05D003505 7.8e-06 53.9 86 44.2
FvH4_2g35460 Fragaria vesca HOM05D007429 ORTHO05D003505 7.8e-06 53.9 85 43.5


User provided reference genes

Program Settings