Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0705G064 Amborella trichopoda HOM05D008208 ORTHO05D010143 0.0e+00 1280.8 724 100.0
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 4.8e-15 87.4 759 27.0
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 4.1e-14 84.3 753 26.6
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 7.2e-11 73.6 750 26.9
Nn6g32057 Nelumbo nucifera HOM05D004628 ORTHO05D005166 7.2e-11 73.6 802 25.4
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 9.4e-11 73.2 752 25.5
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 2.7e-10 71.6 197 37.6
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 4.7e-10 70.9 204 35.3
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 8.0e-10 70.1 220 34.5
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 2.3e-09 68.6 200 33.5
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 8.8e-09 66.6 763 24.6
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 1.2e-08 66.2 152 35.5
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 7.5e-08 63.5 168 36.3
COL.COLO4_30526 Corchorus olitorius HOM05D008208 ORTHO05D010143 9.7e-08 63.2 204 33.8
Prupe.8G151500 Prunus persica HOM05D004628 ORTHO05D005166 9.7e-08 63.2 209 31.6
DCAR_021936 Daucus carota HOM05D004628 ORTHO05D005166 1.3e-07 62.8 85 47.1
vmacro22260 Vaccinium macrocarpon HOM05D004628 ORTHO05D005166 1.3e-07 62.8 237 32.5
HanXRQChr04g0101671 Helianthus annuus HOM05D004628 ORTHO05D005166 1.7e-07 62.4 162 33.3
CANSAT56G0900 Cannabis sativa HOM05D008208 ORTHO05D010143 2.2e-07 62.0 170 34.7
Zm00001eb217550 Zea mays HOM05D058439 ORTHO05D005166 4.8e-07 60.8 178 33.1
Gohir.A03G180400 Gossypium hirsutum HOM05D004628 ORTHO05D005166 6.3e-07 60.5 692 23.4
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 6.3e-07 60.5 195 33.8
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 6.3e-07 60.5 194 32.5
CDE05G0720 Ceratophyllum demersum HOM05D008208 ORTHO05D010143 8.2e-07 60.1 42 71.4
Potri.001G289100 Populus trichocarpa HOM05D004628 ORTHO05D005166 1.1e-06 59.7 193 33.2
Sabra16G0180900 Salix brachista HOM05D004628 ORTHO05D005166 1.1e-06 59.7 205 30.7
EL10Ac4g09112 Beta vulgaris HOM05D004628 ORTHO05D005166 5.3e-06 57.4 189 34.9
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 5.3e-06 57.4 211 32.2
Oeu024259.1 Olea europaea HOM05D008208 ORTHO05D010143 5.3e-06 57.4 162 32.7
PGR102G1678 Punica granatum HOM05D008208 ORTHO05D010143 5.3e-06 57.4 104 39.4
Sc08g0004290 Simmondsia chinensis HOM05D004628 ORTHO05D005166 5.3e-06 57.4 215 32.1
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 9.1e-06 56.6 784 26.4
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 9.1e-06 56.6 151 33.8
Phvul.003G078900 Phaseolus vulgaris HOM05D004628 ORTHO05D005166 9.1e-06 56.6 229 29.7


User provided reference genes

Program Settings