Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 0.0e+00 1167.9 571 100.0
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 5.7e-205 718.0 534 63.7
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 2.6e-197 692.6 540 61.9
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 5.8e-197 691.4 535 61.1
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 2.3e-193 679.5 527 62.4
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 9.5e-192 674.1 532 61.1
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 9.5e-192 674.1 541 61.0
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 9.5e-192 674.1 529 62.0
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 2.1e-191 672.9 541 61.4
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 1.4e-190 670.2 532 62.0
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 8.9e-190 667.5 537 61.3
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 8.9e-190 667.5 543 59.9
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 2.0e-189 666.4 532 61.8
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 2.6e-189 666.0 532 61.8
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 5.8e-189 664.8 534 61.2
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 1.7e-188 663.3 537 60.9
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 4.9e-188 661.8 555 59.1
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 6.4e-188 661.4 543 59.9
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 2.4e-187 659.4 529 59.5
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 3.2e-187 659.1 542 60.3
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 5.4e-187 658.3 532 59.8
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 1.0e-185 654.1 530 59.1
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 1.7e-185 653.3 529 59.2
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 6.6e-185 651.4 538 59.7
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 1.1e-184 650.6 536 59.3
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 1.1e-184 650.6 528 60.4
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 2.5e-184 649.4 554 58.7
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 4.3e-184 648.7 528 60.4
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 7.3e-184 647.9 533 58.9
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 1.2e-183 647.1 536 59.3
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.8e-183 646.0 533 59.1
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 1.8e-182 643.3 523 61.2
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 1.8e-182 643.3 532 59.8
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 2.3e-182 642.9 526 60.1
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 3.1e-182 642.5 533 60.2
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 8.9e-182 641.0 533 58.3
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 1.5e-181 640.2 544 57.2
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.4e-181 639.0 533 58.7
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 4.4e-181 638.6 506 62.5
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 1.9e-179 633.3 526 59.5
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 3.2e-179 632.5 539 59.0
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 1.6e-178 630.2 535 57.0
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 3.0e-177 625.9 638 51.1
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 5.6e-176 621.7 534 57.7
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 9.6e-176 620.9 535 57.0
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 1.4e-174 617.1 545 56.5
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 4.4e-173 612.1 543 55.8
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 7.6e-173 611.3 543 54.9
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 1.7e-172 610.1 543 55.1
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 2.2e-172 609.8 533 56.1
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 2.9e-172 609.4 529 56.0
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 2.9e-172 609.4 497 60.8
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 2.9e-172 609.4 537 56.6
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 3.8e-172 609.0 549 56.1
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 1.1e-171 607.4 543 54.5
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 1.1e-171 607.4 487 61.8
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 2.4e-171 606.3 483 61.5
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 9.3e-171 604.4 522 58.4
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 1.2e-170 604.0 544 55.0
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 1.6e-170 603.6 543 54.5
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 5.1e-169 598.6 495 60.8
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 1.9e-168 596.7 564 54.1
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 2.8e-167 592.8 529 56.3
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 2.9e-164 582.8 547 53.0
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 1.9e-163 580.1 525 55.6
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 1.9e-163 580.1 553 52.3
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 1.2e-162 577.4 551 54.1
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 1.6e-162 577.0 553 53.7
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 2.1e-162 576.6 538 55.0
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 6.0e-162 575.1 487 60.2
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 1.3e-161 573.9 467 59.3
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 8.7e-161 571.2 564 51.4
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 2.5e-160 569.7 618 47.1
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 8.1e-159 564.7 488 58.2
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 2.0e-157 560.1 529 54.3
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 4.2e-155 552.4 535 52.9
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 2.1e-154 550.1 471 58.8
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 4.6e-154 548.9 447 60.4
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 5.1e-153 545.4 622 48.7
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 1.3e-148 530.8 500 56.0
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 2.5e-147 526.6 438 59.8
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 1.2e-146 524.2 457 57.8
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 2.7e-146 523.1 552 48.4
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 3.5e-146 522.7 570 48.8
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 6.0e-146 521.9 443 59.1
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 7.6e-141 505.0 418 59.6
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 1.1e-139 501.1 532 49.4
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 4.6e-138 495.7 393 62.1
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.3e-135 487.6 429 56.9
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 3.7e-135 486.1 469 54.4
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 9.0e-134 481.5 394 59.6
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 2.9e-132 476.5 419 58.0
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 2.0e-128 463.8 422 54.5
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 4.3e-128 462.6 418 56.2
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 1.8e-126 457.2 551 44.3
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 3.1e-126 456.4 460 52.8
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 9.1e-126 454.9 417 55.9
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 9.4e-123 444.9 394 56.3
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 1.6e-122 444.1 386 57.5
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 6.3e-119 432.2 378 55.3
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 5.9e-117 425.6 432 50.9
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 5.0e-108 396.0 400 52.5
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 4.2e-107 392.9 375 53.1
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 6.8e-97 359.0 535 38.9
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 3.3e-91 340.1 243 67.5
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 3.4e-80 303.5 545 35.2
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 9.5e-75 285.4 267 53.6
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 1.1e-65 255.4 435 38.4
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 1.1e-62 245.4 281 47.0
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 2.4e-62 244.2 593 31.7
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 5.4e-62 243.0 255 50.6
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 3.4e-56 223.8 131 75.6
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 5.4e-54 216.5 132 74.2
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 2.7e-53 214.2 563 29.7
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 3.2e-46 190.7 149 60.4
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 1.5e-43 181.8 124 62.9
Nn1g07675 Nelumbo nucifera HOM05D002451 ORTHO05D007901 9.0e-41 172.6 109 69.7
CAN.G4309.1 Capsicum annuum HOM05D002451 ORTHO05D007901 5.8e-40 169.9 139 59.0
Nitab4.5_0000566g0090 Nicotiana tabacum HOM05D002451 ORTHO05D007901 7.9e-37 159.5 99 70.7
Cpa.g.sc40.100 Carica papaya HOM05D002451 ORTHO05D007901 4.3e-35 153.7 93 72.0
unitig_46.g18400 Utricularia gibba HOM05D002451 ORTHO05D007901 7.6e-32 142.9 92 67.4
Cpa.g.c44357 Carica papaya HOM05D002451 ORTHO05D007901 1.6e-26 125.2 155 47.7
Ciclev10010851m.g Citrus clementina HOM05D002451 ORTHO05D007901 1.7e-23 115.2 69 75.4
CBR_g41538 Chara braunii HOM05D002451 ORTHO05D007901 8.7e-20 102.8 110 50.0
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 1.4e-14 85.5 53 69.8
TPR.G23499 Trifolium pratense HOM05D002451 ORTHO05D007901 8.8e-12 76.3 47 63.8


User provided reference genes

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