Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 8.0e-77 290.4 155 100.0
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 2.1e-37 159.5 167 59.3
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 1.7e-34 149.8 165 58.8
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 8.4e-34 147.5 142 61.3
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 5.4e-33 144.8 117 68.4
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 1.2e-32 143.7 166 56.6
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 2.1e-32 142.9 151 58.3
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 2.7e-32 142.5 153 59.5
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 2.7e-32 142.5 130 60.8
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 7.9e-32 141.0 130 60.0
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 1.0e-31 140.6 111 65.8
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 1.0e-31 140.6 111 65.8
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 1.0e-31 140.6 149 57.7
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 1.0e-31 140.6 153 58.8
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 1.0e-31 140.6 153 58.8
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 3.9e-31 138.7 161 55.3
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 8.7e-31 137.5 162 56.2
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 1.1e-30 137.1 98 76.5
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 1.1e-30 137.1 156 57.7
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 1.5e-30 136.7 162 55.6
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 1.5e-30 136.7 98 77.6
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 1.9e-30 136.3 99 73.7
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 1.9e-30 136.3 159 56.0
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 9.6e-30 134.0 156 54.5
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 1.3e-29 133.7 98 75.5
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 1.6e-29 133.3 80 73.8
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 2.1e-29 132.9 156 53.8
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 2.8e-29 132.5 151 51.0
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 6.2e-29 131.3 110 60.0
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 1.4e-28 130.2 142 52.8
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 1.4e-28 130.2 78 73.1
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 1.8e-28 129.8 100 74.0
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 3.1e-28 129.0 97 70.1
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 3.1e-28 129.0 96 68.8
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 3.1e-28 129.0 100 73.0
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 4.0e-28 128.6 97 71.1
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 4.0e-28 128.6 97 70.1
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 4.0e-28 128.6 154 56.5
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 5.3e-28 128.3 100 73.0
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 5.3e-28 128.3 91 71.4
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 5.3e-28 128.3 152 55.3
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 9.0e-28 127.5 152 53.9
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 1.2e-27 127.1 94 76.6
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 1.2e-27 127.1 89 73.0
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 1.2e-27 127.1 93 75.3
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 1.2e-27 127.1 144 52.1
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 2.0e-27 126.3 80 71.2
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 2.6e-27 125.9 93 77.4
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 2.6e-27 125.9 95 76.8
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 3.4e-27 125.6 154 53.9
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 4.5e-27 125.2 153 55.6
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 4.5e-27 125.2 151 53.0
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 5.8e-27 124.8 93 77.4
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 5.8e-27 124.8 93 76.3
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 5.8e-27 124.8 93 76.3
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 2.2e-26 122.9 144 51.4
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 3.8e-26 122.1 102 69.6
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 3.8e-26 122.1 82 69.5
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 3.8e-26 122.1 85 78.8
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 3.8e-26 122.1 95 67.4
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 4.9e-26 121.7 85 64.7
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 1.1e-25 120.6 93 74.2
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 1.1e-25 120.6 93 74.2
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 1.9e-25 119.8 101 67.3
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 1.9e-25 119.8 147 53.1
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 2.5e-25 119.4 138 55.1
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 4.2e-25 118.6 147 53.1
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 4.2e-25 118.6 147 53.1
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 4.2e-25 118.6 147 53.1
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 4.2e-25 118.6 70 78.6
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 4.2e-25 118.6 155 53.5
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 4.2e-25 118.6 88 72.7
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 7.1e-25 117.9 141 49.6
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 9.3e-25 117.5 102 63.7
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 1.6e-24 116.7 103 65.0
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 1.6e-24 116.7 138 54.3
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 2.1e-24 116.3 156 52.6
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 3.5e-24 115.5 103 64.1
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 7.9e-24 114.4 101 64.4
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 1.0e-23 114.0 86 60.5
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 3.3e-22 109.0 152 49.3
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 5.7e-22 108.2 209 34.9
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 2.1e-21 106.3 154 48.7
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 8.2e-21 104.4 84 61.9
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 8.2e-21 104.4 89 66.3
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 1.8e-20 103.2 84 71.4
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 8.4e-18 94.4 84 64.3
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 1.1e-17 94.0 84 65.5
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 2.3e-15 86.3 41 82.9
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 1.9e-14 83.2 103 57.3
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 5.7e-14 81.6 77 58.4
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 7.4e-14 81.3 65 61.5
Haze_23611 Corylus avellana HOM05D007375 ORTHO05D009293 8.2e-13 77.8 115 44.3
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 1.3e-10 70.5 116 43.1
Aa31LG4G13610 Aethionema arabicum HOM05D007375 ORTHO05D009293 2.9e-10 69.3 56 62.5
Glyma.14G019800 Glycine max HOM05D007375 ORTHO05D009293 2.5e-09 66.2 73 47.9
COL.COLO4_25390 Corchorus olitorius HOM05D007375 ORTHO05D009293 1.0e-07 60.8 30 80.0
Dinv18872 Davidia involucrata HOM05D007375 ORTHO05D009293 9.7e-06 54.3 36 72.2


User provided reference genes

Program Settings