Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 2.7e-152 542.0 271 100.0
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 5.9e-67 258.5 214 61.7
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 1.7e-66 256.9 202 63.9
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 8.5e-66 254.6 227 59.9
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 1.5e-65 253.8 213 60.1
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 3.2e-65 252.7 217 59.9
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 4.2e-65 252.3 259 53.7
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 7.2e-65 251.5 260 53.8
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 1.2e-64 250.8 217 59.9
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 3.6e-64 249.2 216 61.1
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.0e-63 247.7 253 53.8
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.0e-63 247.7 253 53.8
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 1.0e-63 247.7 217 59.0
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 1.8e-63 246.9 216 60.6
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 2.3e-63 246.5 208 62.0
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 5.2e-63 245.4 202 61.4
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 6.8e-63 245.0 221 57.9
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 8.8e-63 244.6 191 62.8
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 2.6e-62 243.0 217 59.9
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 5.7e-62 241.9 216 59.7
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 7.5e-62 241.5 212 58.0
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 9.8e-62 241.1 198 59.1
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 9.8e-62 241.1 201 59.7
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 1.7e-61 240.4 227 54.2
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 4.8e-61 238.8 189 61.4
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 6.3e-61 238.4 189 61.9
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 6.3e-61 238.4 192 62.5
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 8.3e-61 238.0 241 54.4
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 1.1e-60 237.7 203 60.1
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 1.4e-60 237.3 207 57.5
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 1.4e-60 237.3 206 57.8
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 2.4e-60 236.5 233 54.1
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 2.4e-60 236.5 205 60.5
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 3.1e-60 236.1 262 50.0
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 4.1e-60 235.7 214 57.5
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 5.4e-60 235.3 200 58.0
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 7.0e-60 235.0 224 55.8
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 7.0e-60 235.0 190 61.6
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 9.1e-60 234.6 219 55.3
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 9.1e-60 234.6 200 56.5
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 9.1e-60 234.6 195 59.0
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 2.7e-59 233.0 265 50.2
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 3.5e-59 232.6 221 54.8
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 4.5e-59 232.3 189 58.7
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 1.3e-58 230.7 206 56.8
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 2.3e-58 229.9 209 57.4
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 3.8e-58 229.2 178 63.5
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 3.8e-58 229.2 205 56.6
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 5.0e-58 228.8 207 57.0
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 6.6e-58 228.4 214 55.6
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 8.6e-58 228.0 217 55.8
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 8.6e-58 228.0 194 58.2
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 1.1e-57 227.6 222 55.9
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 3.3e-57 226.1 219 56.6
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 5.5e-57 225.3 205 56.1
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 7.2e-57 224.9 275 49.1
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 1.2e-56 224.2 205 56.1
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 1.2e-56 224.2 205 56.1
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 1.6e-56 223.8 191 58.6
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 2.8e-56 223.0 213 54.9
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 4.7e-56 222.2 206 54.4
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 4.7e-56 222.2 224 52.2
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 6.1e-56 221.9 192 58.3
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 1.8e-55 220.3 223 53.4
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 2.3e-55 219.9 202 53.5
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 2.3e-55 219.9 191 59.2
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 3.0e-55 219.5 221 53.4
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 3.0e-55 219.5 191 53.9
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 4.0e-55 219.2 195 53.8
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 5.2e-55 218.8 214 52.8
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 6.8e-55 218.4 190 57.9
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 6.8e-55 218.4 191 54.5
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 1.5e-54 217.2 205 52.2
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 1.5e-54 217.2 207 52.2
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 2.0e-54 216.9 202 55.9
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 2.0e-54 216.9 190 57.4
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 2.6e-54 216.5 208 51.9
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 3.4e-54 216.1 207 52.7
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 3.4e-54 216.1 217 53.9
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 3.4e-54 216.1 203 56.7
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 9.8e-54 214.5 207 56.0
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 3.7e-53 212.6 207 51.7
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 6.3e-53 211.8 208 51.0
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 1.8e-52 210.3 199 55.3
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 3.1e-52 209.5 207 51.2
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 2.0e-51 206.8 218 51.8
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 2.7e-51 206.5 167 60.5
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 4.5e-51 205.7 191 56.5
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 2.3e-50 203.4 277 44.4
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 2.3e-50 203.4 205 52.7
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 4.7e-48 195.7 174 58.6
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 1.0e-47 194.5 150 67.3
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 8.9e-47 191.4 241 46.5
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 2.0e-46 190.3 145 63.4
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 4.4e-46 189.1 271 45.4
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 5.8e-46 188.7 158 62.7
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 4.9e-45 185.7 154 62.3
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis HOM05D001890 ORTHO05D008163 6.4e-45 185.3 223 44.4
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 4.1e-44 182.6 203 47.3
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 5.4e-44 182.2 154 61.7
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 4.6e-43 179.1 255 43.9
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 7.8e-43 178.3 177 55.9
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.7e-42 177.2 147 61.2
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 8.6e-42 174.9 141 62.4
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 4.3e-41 172.6 202 50.0
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 1.4e-39 167.5 146 56.8
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 6.4e-37 158.7 137 54.7
CBR_g70174 Chara braunii HOM05D001890 ORTHO05D008163 7.0e-36 155.2 198 43.4
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 3.5e-35 152.9 128 57.8
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 5.1e-34 149.1 113 65.5
Mapoly0055s0040 Marchantia polymorpha HOM05D001890 ORTHO05D008163 8.1e-32 141.7 197 39.1
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 1.4e-28 131.0 154 48.7
Cre11.g467718 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 1.4e-20 104.4 179 37.4
Cre12.g507559 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 1.4e-20 104.4 179 37.4
Psat1g223560 Pisum sativum HOM05D001890 ORTHO05D008163 3.0e-18 96.7 101 49.5
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 6.6e-18 95.5 80 62.5
SMO353G0218 Selaginella moellendorffii HOM05D001890 ORTHO05D008163 1.2e-16 91.3 123 37.4
CBR_g31284 Chara braunii HOM05D001890 ORTHO05D008163 8.1e-16 88.6 149 37.6
Peaxi162Scf00675g00610 Petunia axillaris HOM05D001890 ORTHO05D008163 4.0e-15 86.3 120 44.2
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 9.3e-12 75.1 102 44.1
MCO10G285 Micromonas commoda HOM05D001890 ORTHO05D008163 1.2e-11 74.7 235 28.5
Peaxi162Scf00675g00611 Petunia axillaris HOM05D001890 ORTHO05D008163 3.5e-11 73.2 100 43.0


User provided reference genes

Program Settings