Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 1.8e-63 245.7 122 100.0
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 8.4e-29 130.6 122 56.6
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 8.4e-29 130.6 118 59.3
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 1.1e-28 130.2 122 56.6
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 1.2e-27 126.7 92 64.1
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 4.6e-27 124.8 88 65.9
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 4.6e-27 124.8 103 58.3
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 7.8e-27 124.0 89 65.2
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 7.8e-27 124.0 111 54.1
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 1.0e-26 123.6 95 58.9
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 1.0e-26 123.6 102 62.7
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 1.3e-26 123.2 119 55.5
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 1.7e-26 122.9 111 55.0
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 3.0e-26 122.1 125 52.0
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 3.9e-26 121.7 96 60.4
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 6.6e-26 120.9 84 61.9
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 8.7e-26 120.6 91 63.7
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.1e-25 120.2 125 51.2
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 1.1e-25 120.2 95 61.1
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 1.1e-25 120.2 91 61.5
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 1.5e-25 119.8 75 70.7
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 1.9e-25 119.4 118 55.1
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 1.9e-25 119.4 76 68.4
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 2.5e-25 119.0 92 60.9
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 2.5e-25 119.0 92 60.9
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 2.5e-25 119.0 105 56.2
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 3.3e-25 118.6 99 57.6
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 3.3e-25 118.6 95 57.9
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 4.3e-25 118.2 104 55.8
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 4.3e-25 118.2 129 48.8
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 4.3e-25 118.2 125 50.4
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 4.3e-25 118.2 102 55.9
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 4.3e-25 118.2 85 67.1
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 5.6e-25 117.9 91 59.3
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 5.6e-25 117.9 99 56.6
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 5.6e-25 117.9 75 70.7
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 7.3e-25 117.5 88 59.1
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 7.3e-25 117.5 91 65.9
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 7.3e-25 117.5 106 53.8
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 9.6e-25 117.1 107 53.3
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 1.3e-24 116.7 98 56.1
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 1.3e-24 116.7 74 70.3
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 1.3e-24 116.7 81 67.9
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 1.3e-24 116.7 83 66.3
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 1.3e-24 116.7 74 70.3
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.3e-24 116.7 75 68.0
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.3e-24 116.7 75 68.0
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 1.3e-24 116.7 96 56.2
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 1.3e-24 116.7 90 60.0
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 1.6e-24 116.3 124 47.6
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 2.1e-24 115.9 88 61.4
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 2.1e-24 115.9 83 65.1
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 2.1e-24 115.9 88 61.4
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 2.1e-24 115.9 83 65.1
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 2.1e-24 115.9 85 63.5
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 2.1e-24 115.9 96 58.3
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 2.1e-24 115.9 107 55.1
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 2.1e-24 115.9 112 52.7
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 2.8e-24 115.5 83 66.3
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 2.8e-24 115.5 125 46.4
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 2.8e-24 115.5 95 57.9
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 2.8e-24 115.5 74 70.3
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 2.8e-24 115.5 97 57.7
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 3.6e-24 115.2 84 61.9
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 3.6e-24 115.2 74 68.9
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 3.6e-24 115.2 74 68.9
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 3.6e-24 115.2 74 68.9
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 4.8e-24 114.8 74 68.9
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 4.8e-24 114.8 80 66.2
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 4.8e-24 114.8 88 60.2
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 6.2e-24 114.4 74 68.9
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 8.1e-24 114.0 83 63.9
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 8.1e-24 114.0 85 62.4
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 8.1e-24 114.0 71 73.2
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 8.1e-24 114.0 123 52.0
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 1.1e-23 113.6 75 66.7
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 1.4e-23 113.2 86 64.0
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 1.8e-23 112.8 71 70.4
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 4.0e-23 111.7 71 73.2
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 5.3e-23 111.3 76 65.8
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 6.9e-23 110.9 91 58.2
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 9.0e-23 110.5 73 67.1
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 1.2e-22 110.2 120 46.7
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 2.6e-22 109.0 126 44.4
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 2.6e-22 109.0 88 60.2
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 3.4e-22 108.6 75 68.0
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 9.9e-22 107.1 70 64.3
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 1.7e-21 106.3 97 53.6
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 2.2e-21 105.9 121 47.1
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 2.2e-21 105.9 130 43.1
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 2.9e-21 105.5 125 48.8
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 3.8e-21 105.1 80 53.8
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 4.9e-21 104.8 62 79.0
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 1.9e-20 102.8 105 50.5
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 7.1e-20 100.9 136 41.2
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 1.2e-19 100.1 99 51.5
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 4.6e-19 98.2 115 46.1
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 3.0e-18 95.5 81 51.9
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 2.5e-17 92.4 70 51.4
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 7.3e-17 90.9 68 52.9
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 1.3e-16 90.1 55 70.9
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 3.6e-16 88.6 58 70.7
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 6.2e-16 87.8 64 56.2
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 1.8e-15 86.3 66 60.6
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 6.9e-15 84.3 111 44.1
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 1.0e-10 70.5 37 81.1
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 1.4e-07 60.1 61 47.5
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 1.4e-07 60.1 37 67.6
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 4.5e-06 55.1 60 45.0
Os07g0164200 Oryza sativa ssp. japonica HOM05D007267 ORTHO05D009053 1.0e-05 53.9 75 44.0


User provided reference genes

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