Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0697G250 Amborella trichopoda HOM05D002860 ORTHO05D003123 2.4e-69 265.4 132 100.0
ATR0049G071 Amborella trichopoda HOM05D002860 ORTHO05D003123 3.1e-45 185.3 147 70.1
ATR1125G055 Amborella trichopoda HOM05D002860 ORTHO05D003123 5.7e-23 111.3 77 77.9
Gorai.006G104300 Gossypium raimondii HOM05D002860 ORTHO05D003123 7.0e-13 77.8 144 31.9
Gohir.D09G087800 Gossypium hirsutum HOM05D002860 ORTHO05D003123 9.1e-13 77.4 144 31.2
Gohir.A09G088000 Gossypium hirsutum HOM05D002860 ORTHO05D003123 3.5e-12 75.5 144 29.9
Nn6g33644 Nelumbo nucifera HOM05D002860 ORTHO05D003123 7.7e-12 74.3 138 34.1
TWI74G1238 Tripterygium wilfordii HOM05D002860 ORTHO05D003123 1.0e-11 73.9 153 29.4
PSO675G2471 Papaver somniferum HOM05D002860 ORTHO05D003123 2.2e-11 72.8 141 35.5
PSO541G0690 Papaver somniferum HOM05D002860 ORTHO05D003123 1.1e-10 70.5 141 33.3
Atru.chr8.1087 Acer truncatum HOM05D002860 ORTHO05D003123 4.2e-10 68.6 151 29.8
Dinv25193 Davidia involucrata HOM05D002860 ORTHO05D003123 7.2e-10 67.8 123 32.5
Aqoxy3G02473 Aquilegia oxysepala HOM05D002860 ORTHO05D003123 1.2e-09 67.0 143 32.9
Duzib093G1712 Durio zibethinus HOM05D002860 ORTHO05D003123 1.2e-09 67.0 162 25.9
Duzib106G0036 Durio zibethinus HOM05D002860 ORTHO05D003123 1.2e-09 67.0 161 26.7
PGSC0003DMG400006313 Solanum tuberosum HOM05D002860 ORTHO05D003123 1.2e-09 67.0 125 28.8
TAR623G0275 Trochodendron aralioides HOM05D002860 ORTHO05D003123 1.2e-09 67.0 176 28.4
A09p50810 Brassica napus HOM05D002860 ORTHO05D003123 3.6e-09 65.5 143 28.7
BraA09t40528Z Brassica rapa HOM05D002860 ORTHO05D003123 3.6e-09 65.5 143 28.7
MELO3C008898.2 Cucumis melo HOM05D002860 ORTHO05D003123 3.6e-09 65.5 125 32.0
C08p33560 Brassica napus HOM05D002860 ORTHO05D003123 4.7e-09 65.1 140 30.7
BolC8t50951H Brassica oleracea HOM05D002860 ORTHO05D003123 4.7e-09 65.1 140 30.7
TAR636G2618 Trochodendron aralioides HOM05D002860 ORTHO05D003123 4.7e-09 65.1 151 31.1
Cpa.g.sc85.75 Carica papaya HOM05D002860 ORTHO05D003123 6.1e-09 64.7 160 29.4
Ciclev10012101m.g Citrus clementina HOM05D002860 ORTHO05D003123 6.1e-09 64.7 148 28.4
BcaNung05751 Brassica carinata HOM05D002860 ORTHO05D003123 8.0e-09 64.3 140 29.3
Phvul.007G259100 Phaseolus vulgaris HOM05D002860 ORTHO05D003123 8.0e-09 64.3 155 32.3
Ah.04g152420 Amaranthus hybridus HOM05D002860 ORTHO05D003123 1.0e-08 63.9 164 27.4
DCAR_031778 Daucus carota HOM05D002860 ORTHO05D003123 1.4e-08 63.5 119 36.1
Nitab4.5_0003100g0050 Nicotiana tabacum HOM05D002860 ORTHO05D003123 4.0e-08 62.0 125 32.8
Rhsim07G0123700 Rhododendron simsii HOM05D002860 ORTHO05D003123 4.0e-08 62.0 123 30.1
ATR0605G156 Amborella trichopoda HOM05D002860 ORTHO05D003123 5.2e-08 61.6 151 29.8
CAN.G201.13 Capsicum annuum HOM05D002860 ORTHO05D003123 5.2e-08 61.6 125 32.0
MSTRG.10840 Avicennia marina HOM05D002860 ORTHO05D003123 1.2e-07 60.5 158 29.7
BcaC07g40169 Brassica carinata HOM05D002860 ORTHO05D003123 1.2e-07 60.5 139 30.9
THA.LOC104824470 Tarenaya hassleriana HOM05D002860 ORTHO05D003123 1.2e-07 60.5 150 28.7
VMungo0720G2237 Vigna mungo HOM05D002860 ORTHO05D003123 1.2e-07 60.5 156 29.5
CARHR168310 Cardamine hirsuta HOM05D002860 ORTHO05D003123 1.5e-07 60.1 156 25.6
Glyma.09G112400 Glycine max HOM05D002860 ORTHO05D003123 1.5e-07 60.1 135 29.6
CiPaw.11G089800 Carya illinoinensis HOM05D002860 ORTHO05D003123 2.0e-07 59.7 56 48.2
A04p02810 Brassica napus HOM05D002860 ORTHO05D003123 2.6e-07 59.3 143 31.5
Cc08_g02320 Coffea canephora HOM05D002860 ORTHO05D003123 2.6e-07 59.3 124 29.8
AL5G39640 Arabidopsis lyrata HOM05D002860 ORTHO05D003123 3.3e-07 58.9 158 25.9
BraA04t16005Z Brassica rapa HOM05D002860 ORTHO05D003123 3.3e-07 58.9 143 31.5
CSS0031146 Camellia sinensis var. sinensis HOM05D002860 ORTHO05D003123 3.3e-07 58.9 117 32.5
CSS0043452 Camellia sinensis var. sinensis HOM05D002860 ORTHO05D003123 3.3e-07 58.9 117 32.5
Cfa020178 Carpinus fangiana HOM05D002860 ORTHO05D003123 3.3e-07 58.9 153 28.8
Dinv43930 Davidia involucrata HOM05D002860 ORTHO05D003123 3.3e-07 58.9 167 25.7
Nitab4.5_0004658g0030 Nicotiana tabacum HOM05D002860 ORTHO05D003123 3.3e-07 58.9 123 30.9
CARHR137210 Cardamine hirsuta HOM05D002860 ORTHO05D003123 4.4e-07 58.5 152 27.0
Glyma.02G174300 Glycine max HOM05D002860 ORTHO05D003123 5.7e-07 58.2 141 29.1
MBI01_g01348_MAGBIO Magnolia biondii HOM05D002860 ORTHO05D003123 5.7e-07 58.2 182 25.8
Carub.0005s2483 Capsella rubella HOM05D002860 ORTHO05D003123 7.5e-07 57.8 156 26.9
ClCG10G012630 Citrullus lanatus HOM05D002860 ORTHO05D003123 7.5e-07 57.8 161 29.2
AT3G57990 Arabidopsis thaliana HOM05D002860 ORTHO05D003123 9.7e-07 57.4 158 25.9
MELO3C023944.2 Cucumis melo HOM05D002860 ORTHO05D003123 9.7e-07 57.4 161 26.7
THA.LOC104802510 Tarenaya hassleriana HOM05D002860 ORTHO05D003123 9.7e-07 57.4 151 30.5
FAN08G2852 Fragaria x ananassa HOM05D002860 ORTHO05D003123 1.3e-06 57.0 59 47.5
Carub.0004s2449 Capsella rubella HOM05D002860 ORTHO05D003123 1.7e-06 56.6 150 27.3
Dinv14286 Davidia involucrata HOM05D002860 ORTHO05D003123 1.7e-06 56.6 167 25.7
CiPaw.09G031000 Carya illinoinensis HOM05D002860 ORTHO05D003123 2.2e-06 56.2 150 26.0
FvH4_5g21440 Fragaria vesca HOM05D002860 ORTHO05D003123 2.2e-06 56.2 60 45.0
FAN18G2301 Fragaria x ananassa HOM05D002860 ORTHO05D003123 2.2e-06 56.2 60 45.0
Sp5g04730 Schrenkiella parvula HOM05D002860 ORTHO05D003123 2.2e-06 56.2 156 26.3
TAR369G0455 Trochodendron aralioides HOM05D002860 ORTHO05D003123 2.2e-06 56.2 178 24.7
MSTRG.1975 Avicennia marina HOM05D002860 ORTHO05D003123 2.8e-06 55.8 127 29.9
vmacro07924 Vaccinium macrocarpon HOM05D002860 ORTHO05D003123 3.7e-06 55.5 155 28.4
Aa31LG10G12700 Aethionema arabicum HOM05D002860 ORTHO05D003123 4.8e-06 55.1 149 26.8
Aa31LG1G24080 Aethionema arabicum HOM05D002860 ORTHO05D003123 4.8e-06 55.1 157 22.9
CANSAT64G0384 Cannabis sativa HOM05D002860 ORTHO05D003123 4.8e-06 55.1 156 26.9
RcHm_v2.0_Chr7g0208871 Rosa chinensis HOM05D002860 ORTHO05D003123 4.8e-06 55.1 59 44.1
PGSC0003DMG400026598 Solanum tuberosum HOM05D002860 ORTHO05D003123 6.3e-06 54.7 129 29.5


User provided reference genes

Program Settings