Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 2.3e-204 715.3 358 100.0
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 2.4e-60 236.9 352 41.2
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 3.2e-60 236.5 353 42.8
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 9.2e-60 235.0 346 41.0
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 6.0e-59 232.3 351 40.7
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 2.5e-57 226.9 337 40.4
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 5.6e-57 225.7 350 41.4
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 1.1e-55 221.5 317 40.4
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 1.4e-55 221.1 360 40.8
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 1.8e-55 220.7 334 39.5
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 3.1e-55 219.9 320 40.0
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 1.2e-54 218.0 350 36.9
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.5e-54 217.6 352 36.6
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.5e-54 217.6 352 36.6
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.5e-54 217.6 352 36.6
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 1.5e-54 217.6 333 39.6
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 2.0e-54 217.2 312 42.6
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 4.4e-54 216.1 316 41.5
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 7.6e-54 215.3 349 38.7
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 7.6e-54 215.3 326 38.7
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 9.9e-54 214.9 321 38.9
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.3e-53 214.5 346 38.7
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 1.7e-53 214.2 335 39.1
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 1.7e-53 214.2 311 39.2
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 2.2e-53 213.8 312 39.7
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 3.8e-53 213.0 344 39.8
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 4.9e-53 212.6 344 40.4
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 4.9e-53 212.6 338 39.3
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 6.4e-53 212.2 337 39.2
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 1.4e-52 211.1 321 39.6
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 1.4e-52 211.1 308 39.9
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 2.4e-52 210.3 347 41.2
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 2.4e-52 210.3 325 40.6
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 2.4e-52 210.3 325 37.5
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 5.4e-52 209.1 323 39.9
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 9.3e-52 208.4 316 38.9
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 9.3e-52 208.4 330 38.5
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 3.5e-51 206.5 315 38.7
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 4.6e-51 206.1 320 39.4
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 6.0e-51 205.7 358 38.0
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 7.8e-51 205.3 313 40.6
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 7.8e-51 205.3 336 38.7
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 1.7e-50 204.1 308 38.0
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 6.6e-50 202.2 331 38.4
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 1.1e-49 201.4 316 38.9
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 1.1e-49 201.4 326 37.1
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 1.5e-49 201.1 310 38.7
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 1.5e-49 201.1 333 36.3
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 1.9e-49 200.7 340 36.2
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 1.9e-49 200.7 339 38.3
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 1.9e-49 200.7 336 36.9
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 3.3e-49 199.9 329 38.3
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 4.3e-49 199.5 349 37.8
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 4.3e-49 199.5 337 38.6
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 4.3e-49 199.5 332 38.6
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 5.6e-49 199.1 343 38.2
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 7.3e-49 198.7 346 38.2
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 7.3e-49 198.7 341 36.1
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 1.6e-48 197.6 317 40.4
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 1.6e-48 197.6 325 39.4
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 1.6e-48 197.6 318 36.5
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 2.1e-48 197.2 325 38.8
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 2.8e-48 196.8 328 38.4
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 6.2e-48 195.7 283 41.0
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 8.1e-48 195.3 303 37.3
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 1.4e-47 194.5 312 36.9
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 1.4e-47 194.5 320 37.5
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 1.8e-47 194.1 313 36.7
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 1.8e-47 194.1 333 36.9
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 5.3e-47 192.6 317 37.9
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 5.3e-47 192.6 358 36.3
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 6.9e-47 192.2 359 35.4
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 2.0e-46 190.7 318 37.7
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 2.6e-46 190.3 329 36.8
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 4.9e-45 186.0 359 35.1
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 1.1e-44 184.9 335 34.3
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 7.1e-44 182.2 319 37.0
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 2.7e-43 180.3 330 36.1
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 1.8e-42 177.6 336 36.3
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 5.1e-42 176.0 305 39.3
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 8.7e-42 175.3 343 36.2
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 8.7e-42 175.3 343 36.2
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 8.7e-42 175.3 343 36.2
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 1.9e-41 174.1 302 42.4
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 3.7e-40 169.9 204 39.7
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 6.2e-40 169.1 341 34.9
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 8.1e-40 168.7 374 34.2
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 8.1e-40 168.7 305 35.7
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 1.4e-39 167.9 339 32.7
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 1.8e-39 167.5 304 37.2
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 3.1e-39 166.8 320 35.3
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 3.1e-39 166.8 316 34.2
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 5.3e-39 166.0 338 33.7
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 6.9e-39 165.6 313 34.5
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 5.8e-38 162.5 154 48.1
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 9.9e-38 161.8 320 32.8
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 9.9e-38 161.8 255 38.0
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 2.2e-37 160.6 307 35.5
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 6.4e-37 159.1 336 32.1
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 1.0e-34 151.8 259 40.5
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 3.0e-34 150.2 340 33.5
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 1.9e-33 147.5 289 31.1
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 3.3e-33 146.7 322 32.6
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 7.4e-33 145.6 356 32.3
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 5.3e-31 139.4 266 35.7
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 1.0e-29 135.2 307 32.6
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 2.2e-29 134.0 237 39.2
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 5.5e-28 129.4 189 38.6
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 1.1e-25 121.7 133 44.4
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 3.7e-24 116.7 274 31.0
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 8.2e-24 115.5 107 47.7
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 2.4e-23 114.0 112 49.1
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 2.4e-23 114.0 185 40.5
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 3.1e-23 113.6 173 41.0
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 1.7e-21 107.8 105 49.5
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 3.2e-20 103.6 333 28.8
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 1.1e-17 95.1 97 48.5
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 4.2e-12 76.6 147 38.8
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 5.5e-12 76.3 60 56.7
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 5.5e-12 76.3 60 56.7
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 2.1e-11 74.3 60 55.0
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 2.1e-11 74.3 60 55.0
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 2.7e-11 73.9 92 41.3
BcaC07g42131 Brassica carinata HOM05D005574 ORTHO05D007102 3.6e-11 73.6 112 33.0
C08p51720 Brassica napus HOM05D005574 ORTHO05D007102 3.6e-11 73.6 112 33.0
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 4.7e-11 73.2 92 42.4
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 4.7e-11 73.2 60 55.0
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 4.7e-11 73.2 92 42.4
BcaC09g48798 Brassica carinata HOM05D005574 ORTHO05D007102 1.7e-08 64.7 51 54.9
A09p67440 Brassica napus HOM05D005574 ORTHO05D007102 2.8e-08 63.9 98 33.7
BcaB07g33702 Brassica carinata HOM05D005574 ORTHO05D007102 3.1e-07 60.5 79 39.2
C01p45800 Brassica napus HOM05D005574 ORTHO05D007102 2.6e-06 57.4 112 33.9


User provided reference genes

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