Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 6.2e-168 594.0 283 100.0
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 8.3e-96 354.4 272 66.9
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 5.4e-95 351.7 275 66.9
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 4.2e-92 342.0 287 62.7
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 7.2e-92 341.3 280 62.5
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 1.6e-91 340.1 272 62.5
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 1.2e-89 334.0 273 60.8
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 2.6e-89 332.8 275 62.2
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 4.4e-89 332.0 185 81.1
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 9.8e-89 330.9 272 61.8
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 1.3e-88 330.5 274 62.4
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 2.2e-88 329.7 276 62.3
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 8.3e-88 327.8 243 66.3
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 1.8e-87 326.6 272 59.6
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 2.4e-87 326.2 274 58.0
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 3.1e-87 325.9 279 62.7
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 3.1e-87 325.9 276 61.6
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 4.1e-87 325.5 184 82.1
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 7.0e-87 324.7 251 64.1
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.6e-86 323.6 273 62.6
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 2.0e-86 323.2 272 60.7
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 2.0e-86 323.2 274 60.9
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 2.7e-86 322.8 276 60.9
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 2.7e-86 322.8 197 77.2
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 2.7e-86 322.8 279 59.9
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 4.5e-86 322.0 288 58.0
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 4.5e-86 322.0 259 62.9
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 4.5e-86 322.0 296 58.1
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 5.9e-86 321.6 287 57.8
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 5.9e-86 321.6 201 76.1
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 7.8e-86 321.2 266 60.9
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 7.8e-86 321.2 253 63.6
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 1.0e-85 320.9 264 61.4
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 1.0e-85 320.9 188 80.3
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 2.3e-85 319.7 180 80.6
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.9e-85 319.3 195 75.4
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 3.8e-85 318.9 244 66.8
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 5.0e-85 318.5 197 74.1
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 5.0e-85 318.5 270 61.9
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 6.6e-85 318.2 210 71.0
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 6.6e-85 318.2 210 71.0
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 6.6e-85 318.2 210 71.0
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 6.6e-85 318.2 184 79.3
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 8.6e-85 317.8 187 77.0
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 8.6e-85 317.8 237 65.4
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 1.5e-84 317.0 191 75.4
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 1.5e-84 317.0 210 70.5
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 2.5e-84 316.2 190 77.9
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 4.3e-84 315.5 269 61.0
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 4.3e-84 315.5 190 75.8
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 7.3e-84 314.7 232 66.8
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 9.5e-84 314.3 234 65.4
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 1.2e-83 313.9 272 59.9
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 3.6e-83 312.4 190 75.8
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 3.6e-83 312.4 182 80.2
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.6e-83 312.4 283 58.0
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 4.7e-83 312.0 228 64.0
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 8.0e-83 311.2 182 78.0
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 1.8e-82 310.1 286 55.2
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 3.0e-82 309.3 198 74.2
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 4.0e-82 308.9 190 74.7
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 6.8e-82 308.1 229 68.1
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 1.2e-81 307.4 188 74.5
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 1.2e-81 307.4 180 78.3
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 1.5e-81 307.0 279 57.7
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 1.5e-81 307.0 182 76.4
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 2.9e-80 302.8 184 76.1
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 4.9e-80 302.0 179 75.4
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 5.4e-79 298.5 229 65.1
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 9.2e-79 297.7 271 57.9
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 6.0e-78 295.0 190 73.7
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 7.8e-78 294.7 248 59.3
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 1.3e-77 293.9 189 72.5
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 2.3e-77 293.1 168 79.8
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 6.6e-77 291.6 191 71.2
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 1.9e-76 290.0 315 51.1
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 1.2e-75 287.3 206 67.5
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 6.8e-74 281.6 224 60.7
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 5.8e-73 278.5 236 60.2
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 8.3e-72 274.6 166 74.7
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 5.4e-71 271.9 268 53.4
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 3.0e-69 266.2 154 78.6
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 3.0e-69 266.2 163 74.8
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.9e-69 265.8 274 52.9
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 1.9e-68 263.5 154 79.9
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 9.5e-68 261.2 159 76.1
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 1.8e-66 256.9 236 57.2
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 7.5e-65 251.5 170 65.9
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 8.3e-64 248.1 277 51.3
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.1e-63 247.7 177 67.2
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 5.6e-60 235.3 148 74.3
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 1.4e-58 230.7 196 55.6
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 5.2e-58 228.8 190 56.8
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 1.2e-57 227.6 190 56.8
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 6.4e-56 221.9 287 46.0
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.9e-55 220.3 164 61.0
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 2.7e-54 216.5 187 54.5
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 4.6e-54 215.7 206 54.9
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 3.6e-51 206.1 187 58.8
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 1.1e-50 204.5 187 50.3
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 5.8e-49 198.7 232 46.1
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 1.0e-45 188.0 131 69.5
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 4.3e-44 182.6 176 52.8
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 6.9e-42 175.3 167 54.5
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 1.9e-39 167.2 279 36.2
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 5.4e-39 165.6 110 70.0
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.6e-38 164.1 274 39.4
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 4.6e-38 162.5 112 66.1
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 7.9e-38 161.8 205 44.4
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 5.1e-37 159.1 170 48.8
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 5.6e-36 155.6 107 69.2
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 2.0e-33 147.1 198 41.9
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 3.0e-21 106.7 69 72.5
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 7.7e-09 65.5 59 47.5
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 6.5e-08 62.4 34 79.4


User provided reference genes

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