Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0697G148 Amborella trichopoda HOM05D007956 ORTHO05D010152 3.4e-163 578.6 360 100.0
ATR0751G204 Amborella trichopoda HOM05D007956 ORTHO05D010152 8.3e-117 424.5 291 85.9
TAR629G0629 Trochodendron aralioides HOM05D007956 ORTHO05D010152 3.4e-46 189.9 347 33.4
Duzib235G1205 Durio zibethinus HOM05D007956 ORTHO05D010152 1.1e-44 184.9 347 32.6
Nn1g07048 Nelumbo nucifera HOM05D007956 ORTHO05D010152 9.3e-44 181.8 261 44.4
Gohir.A05G168200 Gossypium hirsutum HOM05D007956 ORTHO05D010152 2.8e-40 170.2 347 32.0
MBI18_g39550_MAGBIO Magnolia biondii HOM05D007956 ORTHO05D010152 3.1e-39 166.8 252 38.9
Gorai.009G176500 Gossypium raimondii HOM05D007956 ORTHO05D010152 5.3e-39 166.0 347 30.8
Gohir.D05G171300 Gossypium hirsutum HOM05D007956 ORTHO05D010152 6.9e-39 165.6 347 30.8
Cc02_g11640 Coffea canephora HOM05D007956 ORTHO05D010152 1.5e-38 164.5 254 38.2
Sc17g0007100 Simmondsia chinensis HOM05D007956 ORTHO05D010152 1.0e-37 161.8 348 30.2
Oeu002723.1 Olea europaea HOM05D007956 ORTHO05D010152 2.2e-37 160.6 252 36.5
HanXRQChr16g0515891 Helianthus annuus HOM05D007956 ORTHO05D010152 2.9e-37 160.2 252 33.7
COL.COLO4_06641 Corchorus olitorius HOM05D007956 ORTHO05D010152 1.1e-36 158.3 348 30.5
DCAR_008134 Daucus carota HOM05D007956 ORTHO05D010152 2.7e-35 153.7 361 37.1
TWI38G0189 Tripterygium wilfordii HOM05D007956 ORTHO05D010152 3.0e-34 150.2 348 27.9
Migut.M01290 Erythranthe guttata HOM05D007956 ORTHO05D010152 6.7e-34 149.1 348 35.6
PGR042G2623 Punica granatum HOM05D007956 ORTHO05D010152 1.1e-33 148.3 348 27.9
Lsat_1_v5_gn_4_59081 Lactuca sativa HOM05D007956 ORTHO05D010152 4.3e-33 146.4 254 31.1
A01p12520 Brassica napus HOM05D007956 ORTHO05D010152 2.8e-32 143.7 255 36.1
AT4G21170 Arabidopsis thaliana HOM05D007956 ORTHO05D010152 1.1e-31 141.7 352 30.1
BcaC09g51250 Brassica carinata HOM05D007956 ORTHO05D010152 1.1e-31 141.7 254 35.0
C01p15110 Brassica napus HOM05D007956 ORTHO05D010152 1.1e-31 141.7 254 35.0
BolC1t01460H Brassica oleracea HOM05D007956 ORTHO05D010152 1.1e-31 141.7 254 35.0
AL7G32950 Arabidopsis lyrata HOM05D007956 ORTHO05D010152 1.4e-31 141.4 352 29.8
Ah.09g235260 Amaranthus hybridus HOM05D007956 ORTHO05D010152 2.4e-31 140.6 350 28.6
BraA01t01197Z Brassica rapa HOM05D007956 ORTHO05D010152 2.4e-31 140.6 255 35.3
Thhalv10024760m.g Eutrema salsugineum HOM05D007956 ORTHO05D010152 6.9e-31 139.0 352 30.1
MSTRG.15969 Avicennia marina HOM05D007956 ORTHO05D010152 1.2e-30 138.3 348 34.5
Sp7g19250 Schrenkiella parvula HOM05D007956 ORTHO05D010152 1.2e-30 138.3 258 34.9
Carub.0007s2026 Capsella rubella HOM05D007956 ORTHO05D010152 2.6e-30 137.1 352 29.3
SalBow8G0305 Salvia bowleyana HOM05D007956 ORTHO05D010152 3.4e-30 136.7 350 27.7
EL10Ac8g19997 Beta vulgaris HOM05D007956 ORTHO05D010152 1.0e-29 135.2 341 26.1
Eucgr.L03252 Eucalyptus grandis HOM05D007956 ORTHO05D010152 5.0e-29 132.9 256 34.8
Cfa000267 Carpinus fangiana HOM05D007956 ORTHO05D010152 6.5e-29 132.5 349 28.4
PGSC0003DMG400002071 Solanum tuberosum HOM05D007956 ORTHO05D010152 8.5e-29 132.1 348 27.3
Solyc02g080170.1 Solanum lycopersicum HOM05D007956 ORTHO05D010152 1.1e-28 131.7 348 26.7
CAN.G569.38 Capsicum annuum HOM05D007956 ORTHO05D010152 1.6e-27 127.9 348 27.6
CARHR227750 Cardamine hirsuta HOM05D007956 ORTHO05D010152 2.7e-27 127.1 353 28.0
SGA_v2.0_scaffold114G32030 Striga asiatica HOM05D007956 ORTHO05D010152 3.6e-27 126.7 348 25.9
Atru.chr10.2152 Acer truncatum HOM05D007956 ORTHO05D010152 7.9e-27 125.6 348 28.2
BcaNung03837 Brassica carinata HOM05D007956 ORTHO05D010152 1.4e-26 124.8 258 31.8
Sabra04G0011500 Salix brachista HOM05D007956 ORTHO05D010152 1.8e-26 124.4 348 27.3
Thecc.06G215000 Theobroma cacao HOM05D007956 ORTHO05D010152 2.0e-25 120.9 382 26.4
Sopen02g024890 Solanum pennellii HOM05D007956 ORTHO05D010152 4.4e-25 119.8 348 25.3
Nitab4.5_0002347g0140 Nicotiana tabacum HOM05D007956 ORTHO05D010152 1.7e-24 117.9 348 26.4
Lj1P1226T19 Lonicera japonica HOM05D007956 ORTHO05D010152 8.2e-24 115.5 252 40.9
vmacro03705 Vaccinium macrocarpon HOM05D007956 ORTHO05D010152 1.4e-23 114.8 345 35.1
AUR62022001 Chenopodium quinoa HOM05D007956 ORTHO05D010152 7.0e-23 112.5 349 25.5
THA.LOC104812478 Tarenaya hassleriana HOM05D007956 ORTHO05D010152 1.6e-22 111.3 274 36.1
Nitab4.5_0005793g0030 Nicotiana tabacum HOM05D007956 ORTHO05D010152 3.5e-22 110.2 348 29.0
Ciclev10018367m.g Citrus clementina HOM05D007956 ORTHO05D010152 1.0e-21 108.6 349 29.2
Manes.16G011600 Manihot esculenta HOM05D007956 ORTHO05D010152 1.5e-20 104.8 348 33.6
CiPaw.09G087900 Carya illinoinensis HOM05D007956 ORTHO05D010152 3.2e-20 103.6 348 27.3
AUR62012653 Chenopodium quinoa HOM05D007956 ORTHO05D010152 4.2e-20 103.2 337 24.9
Prupe.4G025500 Prunus persica HOM05D007956 ORTHO05D010152 2.1e-19 100.9 348 29.3
MD00G1180200 Malus domestica HOM05D007956 ORTHO05D010152 4.0e-18 96.7 385 24.2
Eucgr.E04114 Eucalyptus grandis HOM05D007956 ORTHO05D010152 2.0e-17 94.4 101 47.5
Potri.004G020900 Populus trichocarpa HOM05D007956 ORTHO05D010152 2.0e-17 94.4 348 28.7
QL05p074780 Quercus lobata HOM05D000013 ORTHO05D000011 5.7e-17 92.8 199 27.6
CSS0009024 Camellia sinensis var. sinensis HOM05D007956 ORTHO05D009038 9.7e-17 92.0 346 32.7
CANSAT56G1376 Cannabis sativa HOM05D007956 ORTHO05D010152 3.7e-16 90.1 347 26.5
Peaxi162Scf00427g00116 Petunia axillaris HOM05D007956 ORTHO05D010152 6.3e-16 89.4 92 45.7
QL05p074803 Quercus lobata HOM05D007956 ORTHO05D010152 2.1e-11 74.3 348 30.5
Aa31LG6G3180 Aethionema arabicum HOM05D007956 ORTHO05D010152 2.7e-11 73.9 64 56.2
FvH4_3g02620 Fragaria vesca HOM05D007956 ORTHO05D010152 6.1e-11 72.8 63 57.1
FAN25G3383 Fragaria x ananassa HOM05D007956 ORTHO05D010152 6.1e-11 72.8 346 31.2
FAN21G4014 Fragaria x ananassa HOM05D007956 ORTHO05D010152 1.0e-10 72.0 58 60.3
Aqoxy1G03672 Aquilegia oxysepala HOM05D007956 ORTHO05D010152 2.0e-09 67.8 99 40.4
Haze_06747 Corylus avellana HOM05D007956 ORTHO05D010152 1.3e-08 65.1 49 63.3
Haze_06748 Corylus avellana HOM05D007956 ORTHO05D010152 1.3e-08 65.1 49 63.3
RcHm_v2.0_Chr5g0003911 Rosa chinensis HOM05D007956 ORTHO05D010152 8.3e-08 62.4 164 26.2
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 1.1e-07 62.0 167 27.5
Eucgr.G00976 Eucalyptus grandis HOM05D006980 ORTHO05D008704 4.1e-07 60.1 260 23.8
Nitab4.5_0004679g0050 Nicotiana tabacum HOM05D007291 ORTHO05D009038 2.0e-06 57.8 188 24.5
EL10Ac2g04392 Beta vulgaris HOM05D002460 ORTHO05D002716 3.5e-06 57.0 230 23.0
TPR.G21860 Trifolium pratense HOM05D007063 ORTHO05D008822 3.5e-06 57.0 94 31.9
Prupe.8G118500 Prunus persica HOM05D006858 ORTHO05D008767 4.5e-06 56.6 100 34.0
Actinidia05532 Actinidia chinensis HOM05D007956 ORTHO05D010152 5.9e-06 56.2 163 25.8


User provided reference genes

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