Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 1.7e-131 472.6 232 100.0
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 2.8e-65 252.7 232 56.0
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 9.9e-63 244.2 232 55.6
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 1.1e-50 204.1 236 45.3
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 9.9e-47 191.0 243 43.6
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 2.9e-46 189.5 241 44.0
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 4.9e-46 188.7 233 44.2
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 6.4e-46 188.3 222 44.1
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 2.7e-44 183.0 262 40.8
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 2.7e-44 183.0 248 41.1
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 3.5e-44 182.6 231 42.9
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 7.9e-44 181.4 257 41.2
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 7.9e-44 181.4 262 40.1
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 5.1e-43 178.7 254 39.8
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 1.5e-42 177.2 246 39.4
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 3.3e-42 176.0 221 41.2
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 4.3e-42 175.6 253 39.5
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 4.3e-42 175.6 241 39.0
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 1.6e-41 173.7 226 42.5
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 2.1e-41 173.3 250 37.6
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 2.8e-41 172.9 254 40.2
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 3.7e-41 172.6 248 40.7
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 4.8e-41 172.2 246 39.4
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 8.1e-41 171.4 167 53.9
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 2.4e-40 169.9 235 40.4
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 5.3e-40 168.7 152 53.3
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 6.9e-40 168.3 234 41.5
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 9.0e-40 167.9 216 43.5
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 9.0e-40 167.9 216 43.5
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 9.0e-40 167.9 258 38.4
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 3.4e-39 166.0 240 38.8
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 4.5e-39 165.6 236 40.3
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 7.6e-39 164.9 220 40.0
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 9.9e-39 164.5 206 41.7
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.7e-38 163.7 258 38.0
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 2.2e-38 163.3 228 41.2
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 3.8e-38 162.5 236 40.3
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 1.4e-37 160.6 246 39.4
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 2.3e-35 153.3 150 48.7
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 3.0e-35 152.9 245 38.8
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 3.9e-35 152.5 155 49.7
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 1.1e-34 151.0 255 37.3
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 3.3e-34 149.4 257 35.4
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 3.3e-34 149.4 159 46.5
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 3.3e-34 149.4 247 36.8
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 7.4e-34 148.3 263 35.0
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 9.6e-34 147.9 231 39.4
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 2.1e-33 146.7 248 35.1
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 4.8e-33 145.6 231 38.1
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 7.6e-31 138.3 227 37.0
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 1.0e-30 137.9 245 33.9
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 1.0e-30 137.9 229 36.2
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 1.0e-30 137.9 217 36.4
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 1.3e-30 137.5 148 43.9
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 4.9e-30 135.6 217 33.6
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 6.5e-30 135.2 253 34.0
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 1.1e-29 134.4 248 33.1
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 1.4e-29 134.0 274 32.5
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.9e-29 133.7 226 38.1
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 4.2e-29 132.5 226 38.5
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 7.1e-29 131.7 164 44.5
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 9.3e-29 131.3 167 41.9
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.6e-28 130.6 232 36.2
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 1.6e-28 130.6 226 38.5
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 4.6e-28 129.0 238 36.1
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 1.1e-26 124.4 198 34.8
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 7.4e-26 121.7 236 32.6
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 1.6e-25 120.6 200 33.5
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 6.3e-25 118.6 215 34.0
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 6.3e-25 118.6 261 31.4
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 1.1e-24 117.9 238 35.3
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 1.4e-24 117.5 222 36.5
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 1.2e-23 114.4 150 42.7
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 8.5e-22 108.2 151 39.7
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 2.5e-21 106.7 254 31.9
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.5e-21 106.7 192 34.9
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 4.2e-21 105.9 228 31.1
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.2e-20 104.4 183 37.2
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 1.6e-20 104.0 251 30.3
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 2.3e-19 100.1 128 38.3
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 5.1e-19 99.0 249 30.5
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 6.7e-19 98.6 252 29.8
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 6.7e-19 98.6 163 33.1
CARHR205340 Cardamine hirsuta HOM05D012198 ORTHO05D008817 3.7e-17 92.8 224 32.1
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 3.7e-17 92.8 254 30.7
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 4.1e-16 89.4 143 38.5
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 6.9e-16 88.6 143 36.4
THA.LOC104826165 Tarenaya hassleriana HOM05D012198 ORTHO05D008817 1.2e-15 87.8 239 31.8
C05p03770 Brassica napus HOM05D012198 ORTHO05D008817 2.0e-15 87.0 139 35.3
BolC5t29154H Brassica oleracea HOM05D012198 ORTHO05D008817 2.0e-15 87.0 139 35.3
A10p04130 Brassica napus HOM05D012198 ORTHO05D008817 3.4e-15 86.3 157 33.8
BraA10t42683Z Brassica rapa HOM05D012198 ORTHO05D008817 3.4e-15 86.3 157 33.8
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 4.5e-15 85.9 190 30.5
BcaB02g06861 Brassica carinata HOM05D012198 ORTHO05D008817 5.9e-15 85.5 140 36.4
Sp1g04300 Schrenkiella parvula HOM05D012198 ORTHO05D008817 7.7e-15 85.1 141 32.6
BcaC05g24387 Brassica carinata HOM05D012198 ORTHO05D008817 1.0e-14 84.7 139 34.5
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 2.2e-14 83.6 162 34.0
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 2.2e-14 83.6 236 27.5
BcaC05g24389 Brassica carinata HOM05D012198 ORTHO05D008817 5.5e-13 79.0 129 33.3
MD13G1194600 Malus domestica HOM05D007633 ORTHO05D008817 1.1e-10 71.2 142 34.5
arahy.Tifrunner.gnm1.ann1.5LNY8Z Arachis hypogaea HOM05D007633 ORTHO05D008817 1.5e-10 70.9 81 40.7
arahy.Tifrunner.gnm1.ann1.VQRK5I Arachis hypogaea HOM05D007633 ORTHO05D008817 1.5e-10 70.9 81 40.7
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 9.7e-10 68.2 103 39.8
Zm00001eb222870 Zea mays HOM05D026697 ORTHO05D008817 1.7e-09 67.4 143 28.7
Os10g0430800 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 8.2e-09 65.1 229 27.5
MD07G1251800 Malus domestica HOM05D007633 ORTHO05D008817 3.1e-08 63.2 76 43.4
EL10Ac3g06495 Beta vulgaris HOM05D007633 ORTHO05D008817 5.3e-08 62.4 245 25.3
DCAR_030642 Daucus carota HOM05D007633 ORTHO05D008817 2.0e-07 60.5 101 38.6
Os10g0430700 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 5.9e-07 58.9 231 26.4
MD13G1194800 Malus domestica HOM05D007633 ORTHO05D008817 3.8e-06 56.2 71 45.1
TWI73G0180 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 3.8e-06 56.2 89 34.8


User provided reference genes

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