Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 1.2e-155 553.1 286 100.0
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 3.8e-88 328.9 229 71.6
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 1.6e-86 323.6 264 64.0
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 3.0e-85 319.3 282 59.6
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 9.6e-84 314.3 215 70.7
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 8.1e-83 311.2 244 65.2
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 1.1e-82 310.8 262 61.8
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 1.4e-82 310.5 225 68.9
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 3.1e-82 309.3 227 68.3
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 5.3e-82 308.5 242 64.9
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 5.3e-82 308.5 292 56.8
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 9.0e-82 307.8 224 67.0
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 2.0e-81 306.6 208 71.6
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 3.4e-81 305.8 238 65.5
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 4.4e-81 305.4 222 65.8
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 7.6e-81 304.7 231 64.9
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 1.3e-80 303.9 230 63.5
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 2.2e-80 303.1 278 58.6
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 2.2e-80 303.1 285 57.9
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 2.9e-80 302.8 197 73.1
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 3.8e-80 302.4 216 68.1
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 2.4e-79 299.7 238 63.0
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 2.4e-79 299.7 233 64.8
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 5.4e-79 298.5 208 70.2
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 7.1e-79 298.1 227 64.3
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 9.3e-79 297.7 244 62.3
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 9.3e-79 297.7 278 56.8
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.6e-78 297.0 263 58.6
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 3.5e-78 295.8 238 63.4
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 3.5e-78 295.8 227 63.9
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 4.6e-78 295.4 276 58.3
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 6.0e-78 295.0 287 54.7
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 1.0e-77 294.3 223 65.5
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 1.0e-77 294.3 272 56.6
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 1.0e-77 294.3 217 68.2
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 1.7e-77 293.5 223 65.5
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 3.9e-77 292.4 220 65.5
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 6.6e-77 291.6 208 67.3
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 8.7e-77 291.2 237 61.2
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 8.7e-77 291.2 206 68.0
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 1.5e-76 290.4 271 57.9
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 1.9e-76 290.0 208 67.3
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 1.9e-76 290.0 224 64.3
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 1.9e-76 290.0 218 63.8
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 1.9e-76 290.0 212 67.5
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 2.5e-76 289.7 229 63.3
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 3.3e-76 289.3 286 57.0
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 3.3e-76 289.3 206 68.4
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 4.3e-76 288.9 212 68.4
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 4.3e-76 288.9 206 67.5
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 4.3e-76 288.9 273 56.8
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 7.4e-76 288.1 273 57.5
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 2.8e-75 286.2 274 58.4
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 4.8e-75 285.4 197 69.5
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 4.8e-75 285.4 197 69.5
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 4.8e-75 285.4 197 69.5
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 4.8e-75 285.4 233 61.8
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 6.2e-75 285.0 197 69.5
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 8.1e-75 284.6 273 57.1
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 8.1e-75 284.6 220 63.6
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 8.1e-75 284.6 232 60.3
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 1.1e-74 284.3 280 54.6
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 1.8e-74 283.5 285 56.1
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 1.8e-74 283.5 238 61.3
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 1.8e-74 283.5 223 63.7
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 3.1e-74 282.7 292 54.8
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.2e-73 280.8 226 60.6
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 1.5e-73 280.4 218 63.8
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 5.8e-73 278.5 213 64.3
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 3.8e-72 275.8 235 58.7
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 1.1e-71 274.2 267 55.4
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 1.4e-71 273.9 207 62.8
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 2.4e-71 273.1 222 61.7
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 2.4e-71 273.1 200 65.5
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 9.3e-71 271.2 213 62.9
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 1.2e-70 270.8 207 63.8
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 2.1e-70 270.0 203 65.0
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 1.3e-69 267.3 276 54.7
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 1.8e-69 266.9 197 66.5
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.8e-69 266.9 211 61.6
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 2.3e-69 266.5 217 61.3
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.5e-68 263.8 197 65.5
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 6.2e-67 258.5 226 57.1
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 3.1e-66 256.1 233 55.4
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 1.2e-65 254.2 275 51.6
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.5e-65 253.8 187 67.4
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 6.5e-64 248.4 198 63.6
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 5.5e-63 245.4 276 50.4
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 3.3e-60 236.1 170 67.6
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 5.3e-58 228.8 178 61.8
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 2.9e-56 223.0 177 62.1
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 3.2e-55 219.5 269 46.8
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 5.5e-55 218.8 223 51.1
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 8.7e-53 211.5 257 48.2
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 3.3e-52 209.5 237 47.3
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 2.1e-46 190.3 213 51.2
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 3.6e-46 189.5 137 67.9
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 4.6e-46 189.1 231 49.4
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 3.9e-45 186.0 215 46.5
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 3.4e-41 172.9 195 47.7
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 1.1e-39 167.9 211 43.1
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 2.4e-34 150.2 97 69.1
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 1.0e-32 144.8 149 52.3
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 8.5e-32 141.7 111 63.1
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 4.2e-31 139.4 93 69.9
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 7.2e-31 138.7 81 74.1
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 1.6e-30 137.5 207 37.2
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 3.1e-26 123.2 180 44.4
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 2.7e-25 120.2 89 65.2
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.9e-23 114.0 89 61.8
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 5.7e-20 102.4 67 70.1
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 8.3e-19 98.6 69 68.1
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 2.9e-16 90.1 75 60.0
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 5.0e-16 89.4 100 52.0
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 3.6e-14 83.2 155 38.1
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 3.7e-11 73.2 71 53.5
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 8.3e-11 72.0 55 60.0
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 3.1e-10 70.1 58 55.2
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 1.2e-09 68.2 46 69.6


User provided reference genes

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