Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 1.3e-202 709.5 357 100.0
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 2.0e-70 270.4 359 43.2
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 1.3e-66 257.7 361 43.5
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 5.2e-63 245.7 391 38.6
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 2.6e-62 243.4 358 40.8
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 2.9e-61 240.0 358 42.7
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 2.1e-59 233.8 377 42.4
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 3.9e-58 229.6 361 40.2
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 6.6e-58 228.8 355 42.0
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 8.6e-58 228.4 360 38.6
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 1.9e-57 227.3 358 39.7
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 3.3e-57 226.5 361 42.1
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 9.5e-57 224.9 359 40.1
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 9.5e-57 224.9 356 39.6
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.8e-56 223.4 359 39.3
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 4.7e-56 222.6 357 40.1
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 1.4e-55 221.1 358 39.7
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.8e-55 220.7 359 38.7
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.1e-55 219.9 359 39.6
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 4.0e-55 219.5 363 40.2
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 4.0e-55 219.5 357 39.2
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 8.9e-55 218.4 357 38.7
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 8.9e-55 218.4 359 39.6
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 1.2e-54 218.0 359 39.0
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 1.2e-54 218.0 397 37.3
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 1.5e-54 217.6 363 39.9
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 3.4e-54 216.5 345 38.8
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 4.4e-54 216.1 357 39.2
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 4.4e-54 216.1 359 39.0
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 1.3e-53 214.5 359 37.9
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 1.3e-53 214.5 364 40.7
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 2.9e-53 213.4 355 39.2
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 3.8e-53 213.0 357 38.7
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 1.1e-52 211.5 356 40.2
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 2.4e-52 210.3 360 37.8
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 2.4e-52 210.3 359 38.4
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 2.4e-52 210.3 356 39.0
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 3.2e-52 209.9 357 38.1
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 4.1e-52 209.5 359 38.2
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 4.1e-52 209.5 361 37.4
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 2.7e-51 206.8 358 37.4
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 1.3e-50 204.5 392 37.5
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 1.7e-50 204.1 362 36.2
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 3.9e-50 203.0 356 37.9
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 8.6e-50 201.8 363 36.6
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 1.4e-47 194.5 292 41.8
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 2.4e-47 193.7 320 42.8
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 1.2e-46 191.4 356 37.6
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 1.5e-46 191.0 358 38.0
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 7.6e-46 188.7 356 37.4
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 3.8e-45 186.4 376 34.6
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 3.2e-44 183.3 355 34.6
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 2.7e-43 180.3 356 36.8
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 3.5e-43 179.9 356 33.4
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 3.5e-43 179.9 353 34.3
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 6.0e-43 179.1 205 48.8
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 1.3e-42 177.9 355 35.2
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 1.7e-42 177.6 355 34.9
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 2.3e-42 177.2 355 34.9
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 3.0e-42 176.8 356 36.5
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 8.7e-42 175.3 356 36.2
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 4.3e-41 172.9 383 33.2
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 1.6e-40 171.0 357 33.6
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 1.6e-40 171.0 356 36.0
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 1.6e-40 171.0 356 33.4
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 2.8e-40 170.2 324 36.7
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 1.1e-39 168.3 349 33.5
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 2.4e-39 167.2 356 35.4
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 3.1e-39 166.8 357 32.8
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 1.5e-38 164.5 189 50.3
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.5e-38 164.5 208 45.2
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 3.4e-38 163.3 316 36.7
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 3.4e-38 163.3 293 34.1
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 7.6e-38 162.2 192 49.5
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 1.3e-37 161.4 294 37.8
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 8.4e-37 158.7 336 35.7
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.9e-36 157.5 335 33.7
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 1.9e-36 157.5 359 33.4
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 3.2e-36 156.8 322 36.0
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 6.0e-35 152.5 356 33.1
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 6.0e-35 152.5 307 34.5
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 6.0e-35 152.5 356 32.9
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 1.0e-34 151.8 356 33.1
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 9.6e-33 145.2 189 45.0
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 3.7e-32 143.3 292 33.9
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 3.1e-31 140.2 191 44.0
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 1.4e-28 131.3 307 29.6
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.9e-28 131.0 290 34.5
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 2.7e-27 127.1 107 57.0
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 7.9e-27 125.6 359 29.5
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 1.0e-26 125.2 358 30.2
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.0e-26 125.2 85 68.2
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 1.0e-26 125.2 301 31.9
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.5e-25 121.3 189 40.7
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.5e-22 111.3 86 60.5
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 1.1e-20 105.1 298 29.9
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 2.3e-18 97.4 366 24.9
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 1.5e-17 94.7 411 23.4
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 4.8e-16 89.7 361 24.1
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 4.1e-15 86.7 405 22.5
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 3.0e-10 70.5 414 22.9
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 3.3e-09 67.0 77 49.4
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.3e-09 67.0 178 30.3
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 1.3e-08 65.1 72 48.6
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 3.7e-08 63.5 74 44.6
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 9.1e-07 58.9 66 45.5
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 1.5e-06 58.2 40 65.0
MD12G1047700 Malus domestica HOM05D007071 ORTHO05D008677 2.0e-06 57.8 45 55.6


User provided reference genes

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