Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 1.1e-72 276.6 139 100.0
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 8.4e-25 117.5 73 75.3
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 1.2e-23 113.6 119 54.6
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.2e-23 113.6 124 48.4
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 1.6e-23 113.2 103 57.3
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 1.6e-23 113.2 107 53.3
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 2.7e-23 112.5 76 68.4
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 4.6e-23 111.7 76 69.7
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 4.6e-23 111.7 119 51.3
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 7.8e-23 110.9 89 58.4
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 1.0e-22 110.5 76 71.1
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 1.0e-22 110.5 76 71.1
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 1.3e-22 110.2 76 69.7
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 1.7e-22 109.8 76 65.8
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 1.7e-22 109.8 95 57.9
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 2.3e-22 109.4 98 55.1
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 2.3e-22 109.4 92 56.5
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 3.0e-22 109.0 76 71.1
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 3.0e-22 109.0 74 74.3
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 3.0e-22 109.0 74 74.3
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 3.9e-22 108.6 75 70.7
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 3.9e-22 108.6 74 71.6
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 5.1e-22 108.2 101 54.5
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 5.1e-22 108.2 100 54.0
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 5.1e-22 108.2 76 67.1
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 6.6e-22 107.8 82 63.4
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 6.6e-22 107.8 95 56.8
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 8.6e-22 107.5 73 68.5
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 8.6e-22 107.5 95 57.9
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 8.6e-22 107.5 98 56.1
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 1.1e-21 107.1 95 55.8
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 1.5e-21 106.7 72 68.1
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 1.9e-21 106.3 83 59.0
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 1.9e-21 106.3 81 63.0
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 1.9e-21 106.3 74 73.0
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 1.9e-21 106.3 76 64.5
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 1.9e-21 106.3 80 61.2
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 1.9e-21 106.3 78 64.1
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 2.5e-21 105.9 75 69.3
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 2.5e-21 105.9 73 67.1
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 2.5e-21 105.9 73 67.1
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 2.5e-21 105.9 92 53.3
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 2.5e-21 105.9 98 55.1
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 4.3e-21 105.1 73 67.1
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 4.3e-21 105.1 76 65.8
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 4.3e-21 105.1 76 67.1
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 4.3e-21 105.1 76 67.1
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 5.6e-21 104.8 103 46.6
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 5.6e-21 104.8 75 68.0
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 5.6e-21 104.8 75 68.0
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 5.6e-21 104.8 75 68.0
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 7.3e-21 104.4 76 65.8
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 7.3e-21 104.4 76 65.8
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 1.2e-20 103.6 73 63.0
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 1.6e-20 103.2 76 65.8
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 1.6e-20 103.2 91 53.8
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 1.6e-20 103.2 71 66.2
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 2.1e-20 102.8 76 64.5
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 2.1e-20 102.8 63 77.8
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 2.1e-20 102.8 73 68.5
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 2.8e-20 102.4 85 60.0
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 4.7e-20 101.7 90 53.3
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 6.2e-20 101.3 85 58.8
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 6.2e-20 101.3 126 50.0
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 8.1e-20 100.9 81 55.6
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 8.1e-20 100.9 76 59.2
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 8.1e-20 100.9 87 55.2
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 8.1e-20 100.9 102 53.9
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 8.1e-20 100.9 102 53.9
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 8.1e-20 100.9 73 65.8
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 1.1e-19 100.5 87 62.1
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 1.4e-19 100.1 76 60.5
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 2.4e-19 99.4 87 57.5
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 2.4e-19 99.4 95 52.6
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 5.2e-19 98.2 93 52.7
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 5.2e-19 98.2 89 53.9
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 6.8e-19 97.8 73 60.3
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 8.9e-19 97.4 73 63.0
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.2e-18 97.1 76 56.6
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 1.5e-18 96.7 75 68.0
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 2.0e-18 96.3 75 58.7
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 2.6e-18 95.9 99 49.5
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 2.6e-18 95.9 90 50.0
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 4.4e-18 95.1 85 57.6
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 9.9e-18 94.0 96 50.0
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 1.7e-17 93.2 79 55.7
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 2.2e-17 92.8 76 55.3
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 1.4e-16 90.1 92 51.1
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 1.9e-16 89.7 75 58.7
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 3.2e-16 89.0 93 50.5
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 3.2e-16 89.0 168 36.3
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 4.2e-16 88.6 83 56.6
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 7.1e-16 87.8 77 50.6
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 1.0e-14 84.0 73 50.7
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 1.3e-14 83.6 48 70.8
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 1.1e-13 80.5 48 79.2
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 1.5e-13 80.1 48 72.9
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 7.3e-13 77.8 80 47.5
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 7.3e-13 77.8 108 46.3
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 6.2e-12 74.7 48 70.8
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 6.9e-11 71.2 53 62.3
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 1.2e-10 70.5 55 60.0
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 1.2e-10 70.5 49 65.3
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 1.3e-09 67.0 56 42.9
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 3.8e-09 65.5 105 40.0
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 6.0e-07 58.2 79 46.8


User provided reference genes

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