Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 5.1e-95 350.9 158 100.0
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 5.9e-59 231.1 139 72.7
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 3.8e-58 228.4 139 71.9
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 8.5e-58 227.3 134 71.6
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 1.1e-57 226.9 138 71.7
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 1.5e-57 226.5 127 74.8
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 3.2e-57 225.3 139 66.9
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 9.4e-57 223.8 166 60.8
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 2.1e-56 222.6 149 62.4
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 2.7e-56 222.2 145 69.7
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 3.6e-56 221.9 126 72.2
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 3.6e-56 221.9 135 69.6
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 4.7e-56 221.5 135 68.9
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 6.1e-56 221.1 157 61.8
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 6.1e-56 221.1 131 70.2
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 8.0e-56 220.7 162 61.1
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 1.0e-55 220.3 156 62.8
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 2.0e-54 216.1 131 67.9
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 2.6e-54 215.7 147 62.6
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 2.6e-54 215.7 135 66.7
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 2.6e-54 215.7 153 61.4
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 4.4e-54 214.9 155 64.5
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 1.3e-53 213.4 140 67.1
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 1.3e-53 213.4 126 68.3
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 1.7e-53 213.0 125 69.6
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 2.8e-53 212.2 159 57.2
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 6.3e-53 211.1 139 62.6
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 6.3e-53 211.1 135 66.7
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.1e-52 210.3 135 66.7
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 1.8e-52 209.5 158 58.2
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 5.3e-52 208.0 137 66.4
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 7.0e-52 207.6 139 66.9
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 7.0e-52 207.6 157 60.5
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 9.1e-52 207.2 159 56.0
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.2e-51 206.8 136 66.2
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.6e-51 206.5 132 65.2
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 1.6e-51 206.5 121 71.1
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 2.0e-51 206.1 126 69.8
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.0e-51 206.1 157 60.5
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 2.7e-51 205.7 149 65.8
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 3.5e-51 205.3 149 63.1
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 3.5e-51 205.3 126 66.7
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 3.5e-51 205.3 136 65.4
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 4.5e-51 204.9 139 66.2
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 4.5e-51 204.9 131 66.4
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 4.5e-51 204.9 157 59.9
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 5.9e-51 204.5 137 67.9
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 7.7e-51 204.1 127 72.4
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 7.7e-51 204.1 141 61.7
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 1.0e-50 203.8 157 59.9
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.0e-50 203.8 157 59.9
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 1.3e-50 203.4 137 66.4
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 1.3e-50 203.4 140 66.4
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 1.7e-50 203.0 137 66.4
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 1.7e-50 203.0 131 64.9
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 1.7e-50 203.0 131 65.6
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 2.2e-50 202.6 121 68.6
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 2.2e-50 202.6 154 57.1
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 2.9e-50 202.2 140 66.4
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.9e-50 202.2 155 60.0
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 3.8e-50 201.8 136 62.5
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 3.8e-50 201.8 140 65.0
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 3.8e-50 201.8 146 59.6
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 5.0e-50 201.4 139 65.5
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 8.5e-50 200.7 136 62.5
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 1.1e-49 200.3 134 64.9
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 1.1e-49 200.3 138 62.3
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.5e-49 199.9 126 65.9
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 2.5e-49 199.1 128 66.4
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 3.2e-49 198.7 130 63.8
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 7.2e-49 197.6 137 65.7
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 2.7e-48 195.7 138 60.1
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 6.1e-48 194.5 160 56.9
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 2.3e-47 192.6 159 57.2
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 5.2e-47 191.4 161 57.8
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.2e-46 190.3 129 62.8
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 4.1e-44 181.8 124 62.1
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 1.3e-42 176.8 129 62.0
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 2.2e-42 176.0 151 51.7
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 6.5e-42 174.5 110 62.7
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 3.2e-41 172.2 121 60.3
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 1.6e-40 169.9 112 68.8
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 1.6e-40 169.9 116 62.1
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 1.0e-39 167.2 115 55.7
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 2.3e-39 166.0 120 58.3
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 4.4e-38 161.8 122 57.4
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 4.9e-37 158.3 128 57.0
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 2.4e-36 156.0 139 55.4
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 1.6e-35 153.3 128 56.2
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 1.6e-35 153.3 135 56.3
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 5.9e-35 151.4 90 72.2
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 5.9e-35 151.4 131 52.7
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 1.3e-34 150.2 139 54.7
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 1.7e-29 133.3 128 49.2
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 2.2e-29 132.9 78 67.9
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 6.6e-26 121.3 85 60.0
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.3e-18 97.1 60 68.3
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 3.6e-16 89.0 71 56.3
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 2.0e-14 83.2 65 53.8
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 3.4e-14 82.4 171 28.7
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 3.2e-12 75.9 45 73.3


User provided reference genes

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