Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G415 Amborella trichopoda HOM05D000536 ORTHO05D001674 6.6e-31 136.7 69 100.0
ClCG11G018540 Citrullus lanatus HOM05D000536 ORTHO05D001674 4.5e-11 70.9 46 76.1
Cc05_g12740 Coffea canephora HOM05D000536 ORTHO05D001674 9.9e-11 69.7 47 74.5
Nn1g06777 Nelumbo nucifera HOM05D000536 ORTHO05D001674 9.9e-11 69.7 46 73.9
SGA_v2.0_scaffold34G13711 Striga asiatica HOM05D001554 ORTHO05D001481 1.7e-10 68.9 46 78.3
MBI18_g07610_MAGBIO Magnolia biondii HOM05D000536 ORTHO05D001674 2.9e-10 68.2 46 73.9
Thecc.07G070500 Theobroma cacao HOM05D000536 ORTHO05D001674 2.9e-10 68.2 46 78.3
Cfa020500 Carpinus fangiana HOM05D000536 ORTHO05D001674 4.9e-10 67.4 46 76.1
PSO541G2740 Papaver somniferum HOM05D000536 ORTHO05D001674 4.9e-10 67.4 46 76.1
PSO675G7643 Papaver somniferum HOM05D000536 ORTHO05D001674 4.9e-10 67.4 46 76.1
Potri.004G034000 Populus trichocarpa HOM05D000536 ORTHO05D001674 6.4e-10 67.0 46 76.1
Atru.chr2.2930 Acer truncatum HOM05D000536 ORTHO05D001674 8.4e-10 66.6 46 76.1
Sabra04G0019600 Salix brachista HOM05D000536 ORTHO05D001674 8.4e-10 66.6 46 76.1
GSVIVG01014443001 Vitis vinifera HOM05D000536 ORTHO05D001674 8.4e-10 66.6 46 76.1
Cpa.g.sc12.37 Carica papaya HOM05D000536 ORTHO05D001674 1.1e-09 66.2 46 73.9
Dinv22360 Davidia involucrata HOM05D000536 ORTHO05D001674 1.1e-09 66.2 49 71.4
Manes.15G082601 Manihot esculenta HOM05D000536 ORTHO05D001674 1.1e-09 66.2 46 73.9
SalBow7G2719 Salvia bowleyana HOM05D000536 ORTHO05D001674 1.1e-09 66.2 46 73.9
Duzib268G0283 Durio zibethinus HOM05D000536 ORTHO05D001674 1.4e-09 65.9 46 76.1
Migut.M01855 Erythranthe guttata HOM05D000536 ORTHO05D001674 1.4e-09 65.9 46 73.9
MBI02_g47449_MAGBIO Magnolia biondii HOM05D000536 ORTHO05D001674 1.4e-09 65.9 46 65.2
Nn1g03879 Nelumbo nucifera HOM05D000536 ORTHO05D001674 1.4e-09 65.9 45 77.8
Sabra11G0111000 Salix brachista HOM05D000536 ORTHO05D001674 1.4e-09 65.9 46 73.9
TAR629G1597 Trochodendron aralioides HOM05D000536 ORTHO05D001674 1.4e-09 65.9 46 73.9
arahy.Tifrunner.gnm1.ann1.8XZZ1K Arachis hypogaea HOM05D000536 ORTHO05D001674 1.9e-09 65.5 46 73.9
arahy.Tifrunner.gnm1.ann1.XX0NXH Arachis hypogaea HOM05D000536 ORTHO05D001674 1.9e-09 65.5 46 73.9
Glyma.12G218900 Glycine max HOM05D000536 ORTHO05D001674 1.9e-09 65.5 46 73.9
Lj3g0016278 Lotus japonicus HOM05D000536 ORTHO05D001674 1.9e-09 65.5 46 73.9
QL08p017573 Quercus lobata HOM05D000536 ORTHO05D001674 1.9e-09 65.5 46 73.9
CsaV3_3G044330 Cucumis sativus L. HOM05D000536 ORTHO05D001674 2.4e-09 65.1 46 69.6
MD05G1325900 Malus domestica HOM05D000536 ORTHO05D001674 2.4e-09 65.1 46 71.7
CiPaw.12G123200 Carya illinoinensis HOM05D000536 ORTHO05D001674 3.2e-09 64.7 46 71.7
Ciclev10009966m.g Citrus clementina HOM05D000536 ORTHO05D001674 3.2e-09 64.7 46 73.9
Gohir.A04G025650 Gossypium hirsutum HOM05D000536 ORTHO05D001674 3.2e-09 64.7 46 71.7
Gohir.D05G362200 Gossypium hirsutum HOM05D000536 ORTHO05D001674 3.2e-09 64.7 46 71.7
Gorai.009G430500 Gossypium raimondii HOM05D000536 ORTHO05D001674 3.2e-09 64.7 46 71.7
Manes.03G116900 Manihot esculenta HOM05D000536 ORTHO05D001674 3.2e-09 64.7 46 71.7
Potri.011G126400 Populus trichocarpa HOM05D000536 ORTHO05D001674 3.2e-09 64.7 46 73.9
TAR626G0409 Trochodendron aralioides HOM05D000536 ORTHO05D001674 3.2e-09 64.7 46 71.7
Haze_09542 Corylus avellana HOM05D000536 ORTHO05D001674 4.2e-09 64.3 46 73.9
MELO3C018185.2 Cucumis melo HOM05D000536 ORTHO05D001674 4.2e-09 64.3 46 69.6
Potri.001G407900 Populus trichocarpa HOM05D000536 ORTHO05D001674 4.2e-09 64.3 46 76.1
CANSAT11G2694 Cannabis sativa HOM05D000536 ORTHO05D001674 5.4e-09 63.9 46 73.9
Lsat_1_v5_gn_7_106740 Lactuca sativa HOM05D000536 ORTHO05D001674 5.4e-09 63.9 46 73.9
SGA_v2.0_scaffold73G24322 Striga asiatica HOM05D001554 ORTHO05D001481 5.4e-09 63.9 46 73.9
Sed0021186 Sechium edule HOM05D000536 ORTHO05D001674 7.1e-09 63.5 46 69.6
TWI39G0213 Tripterygium wilfordii HOM05D000536 ORTHO05D001674 7.1e-09 63.5 46 76.1
CDE12G0625 Ceratophyllum demersum HOM05D000536 ORTHO05D001674 9.3e-09 63.2 46 67.4
COL.COLO4_09487 Corchorus olitorius HOM05D000536 ORTHO05D001674 9.3e-09 63.2 46 73.9
Hma1.2p1_2163F.1_g315710 Hydrangea macrophylla HOM05D000536 ORTHO05D001674 9.3e-09 63.2 46 71.7
Oeu030437.1 Olea europaea HOM05D000536 ORTHO05D001674 9.3e-09 63.2 46 69.6
Phvul.011G138300 Phaseolus vulgaris HOM05D000536 ORTHO05D001674 9.3e-09 63.2 46 71.7
RhsimUnG0258200 Rhododendron simsii HOM05D000536 ORTHO05D001674 9.3e-09 63.2 46 71.7
VMungo1127G0190 Vigna mungo HOM05D000536 ORTHO05D001674 9.3e-09 63.2 46 71.7
BcaC09g50580 Brassica carinata HOM05D000536 ORTHO05D001674 1.2e-08 62.8 46 71.7
BcaNung03035 Brassica carinata HOM05D000536 ORTHO05D001674 1.2e-08 62.8 46 71.7
A01p18540 Brassica napus HOM05D000536 ORTHO05D001674 1.2e-08 62.8 46 71.7
C01p23490 Brassica napus HOM05D000536 ORTHO05D001674 1.2e-08 62.8 46 71.7
BolC1t02295H Brassica oleracea HOM05D000536 ORTHO05D001674 1.2e-08 62.8 46 71.7
BraA01t01803Z Brassica rapa HOM05D000536 ORTHO05D001674 1.2e-08 62.8 46 71.7
CDE01G0403 Ceratophyllum demersum HOM05D000536 ORTHO05D001674 1.2e-08 62.8 46 67.4
Glyma.06G270500 Glycine max HOM05D000536 ORTHO05D001674 1.2e-08 62.8 46 71.7
Glyma.12G134200 Glycine max HOM05D000536 ORTHO05D001674 1.2e-08 62.8 46 71.7
Prupe.4G037500 Prunus persica HOM05D000536 ORTHO05D001674 1.2e-08 62.8 46 69.6
Sp7g25290 Schrenkiella parvula HOM05D000536 ORTHO05D001674 1.2e-08 62.8 46 71.7
Aqoxy1G03892 Aquilegia oxysepala HOM05D000536 ORTHO05D001674 1.6e-08 62.4 46 71.7
HanXRQChr02g0031391 Helianthus annuus HOM05D000536 ORTHO05D001674 1.6e-08 62.4 46 67.4
MD10G1303800 Malus domestica HOM05D000536 ORTHO05D001674 1.6e-08 62.4 46 69.6
vmacro09569 Vaccinium macrocarpon HOM05D000536 ORTHO05D001674 1.6e-08 62.4 46 71.7
Dinv08349 Davidia involucrata HOM05D000536 ORTHO05D001674 2.1e-08 62.0 45 73.3
ECA236G3635 Erigeron canadensis HOM05D000536 ORTHO05D001674 2.1e-08 62.0 46 69.6
Solyc07g063610.4 Solanum lycopersicum HOM05D000536 ORTHO05D001674 2.1e-08 62.0 46 69.6
Sopen07g031790 Solanum pennellii HOM05D000536 ORTHO05D001674 2.1e-08 62.0 46 69.6
PGSC0003DMG400019247 Solanum tuberosum HOM05D000536 ORTHO05D001674 2.1e-08 62.0 46 69.6
TPR.G27307 Trifolium pratense HOM05D000536 ORTHO05D001674 2.1e-08 62.0 46 69.6
Ca_23009_v3 Cicer arietinum L. HOM05D000536 ORTHO05D001674 2.7e-08 61.6 46 67.4
Thhalv10027370m.g Eutrema salsugineum HOM05D000536 ORTHO05D001674 2.7e-08 61.6 46 71.7
Gohir.D01G056600 Gossypium hirsutum HOM05D000536 ORTHO05D001674 2.7e-08 61.6 46 69.6
Gorai.002G076700 Gossypium raimondii HOM05D000536 ORTHO05D001674 2.7e-08 61.6 46 69.6
Actinidia05146 Actinidia chinensis HOM05D000536 ORTHO05D001674 3.5e-08 61.2 45 68.9
CARHR235010 Cardamine hirsuta HOM05D000536 ORTHO05D001674 3.5e-08 61.2 46 69.6
Eucgr.F03359 Eucalyptus grandis HOM05D000536 ORTHO05D001674 3.5e-08 61.2 45 71.1
FvH4_3g03950 Fragaria vesca HOM05D000536 ORTHO05D001674 3.5e-08 61.2 46 67.4
FAN11G2239 Fragaria x ananassa HOM05D000536 ORTHO05D001674 3.5e-08 61.2 46 67.4
FAN16G0691 Fragaria x ananassa HOM05D000536 ORTHO05D001674 3.5e-08 61.2 46 67.4
Gohir.A10G021300 Gossypium hirsutum HOM05D000536 ORTHO05D001674 3.5e-08 61.2 46 67.4
Lj2g0022353 Lotus japonicus HOM05D000536 ORTHO05D001674 3.5e-08 61.2 46 69.6
Lj3g0020230 Lotus japonicus HOM05D000536 ORTHO05D001674 3.5e-08 61.2 46 69.6
Medtr8g464690 Medicago truncatula HOM05D000536 ORTHO05D001674 3.5e-08 61.2 46 69.6
CiPaw.11G177300 Carya illinoinensis HOM05D000536 ORTHO05D001674 4.6e-08 60.8 46 69.6
Duzib235G0235 Durio zibethinus HOM05D000536 ORTHO05D001674 4.6e-08 60.8 46 67.4
PGR083G0126 Punica granatum HOM05D000536 ORTHO05D001674 4.6e-08 60.8 46 71.7
AT4G27360 Arabidopsis thaliana HOM05D000536 ORTHO05D001674 6.0e-08 60.5 46 67.4
Gohir.A01G069100 Gossypium hirsutum HOM05D000536 ORTHO05D001674 6.0e-08 60.5 46 67.4
Nitab4.5_0000297g0140 Nicotiana tabacum HOM05D000536 ORTHO05D001674 6.0e-08 60.5 46 67.4
Nitab4.5_0008033g0010 Nicotiana tabacum HOM05D000536 ORTHO05D001674 6.0e-08 60.5 46 67.4
RcHm_v2.0_Chr5g0006281 Rosa chinensis HOM05D000536 ORTHO05D001674 6.0e-08 60.5 46 67.4
Lalb_Chr03g0030371 Lupinus albus HOM05D000536 ORTHO05D001674 7.9e-08 60.1 46 65.2
CSS0011809 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001674 1.0e-07 59.7 46 69.6
Carub.0007s1351 Capsella rubella HOM05D000536 ORTHO05D001674 1.3e-07 59.3 46 67.4
Cpa.g.sc27.131 Carica papaya HOM05D000536 ORTHO05D001674 1.3e-07 59.3 46 65.2
FAN25G0165 Fragaria x ananassa HOM05D000536 ORTHO05D001674 1.3e-07 59.3 46 65.2
Thecc.06G200100 Theobroma cacao HOM05D000536 ORTHO05D001674 1.3e-07 59.3 46 65.2
Gorai.011G023200 Gossypium raimondii HOM05D000536 ORTHO05D001674 2.3e-07 58.5 46 65.2
Gohir.D10G022100 Gossypium hirsutum HOM05D000536 ORTHO05D001674 3.0e-07 58.2 46 65.2
Sc03g0009560 Simmondsia chinensis HOM05D000536 ORTHO05D001674 3.0e-07 58.2 46 65.2
FvH4_3g21070 Fragaria vesca HOM05D000536 ORTHO05D001674 3.9e-07 57.8 46 67.4
FAN11G1689 Fragaria x ananassa HOM05D000536 ORTHO05D001674 3.9e-07 57.8 46 67.4
FAN21G2939 Fragaria x ananassa HOM05D000536 ORTHO05D001674 3.9e-07 57.8 46 67.4
FAN25G3274 Fragaria x ananassa HOM05D000536 ORTHO05D001674 3.9e-07 57.8 46 67.4
RcHm_v2.0_Chr5g0036101 Rosa chinensis HOM05D000536 ORTHO05D001674 3.9e-07 57.8 46 67.4
Hma1.2p1_1579F.1_g291880 Hydrangea macrophylla HOM05D000536 ORTHO05D001674 5.1e-07 57.4 46 67.4
Mapoly0014s0201 Marchantia polymorpha HOM05D000536 ORTHO05D001674 6.7e-07 57.0 46 60.9
Prupe.4G191300 Prunus persica HOM05D000536 ORTHO05D001674 8.7e-07 56.6 45 66.7
CSS0033939 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001674 1.9e-06 55.5 43 72.1
Peaxi162Scf01216g00054 Petunia axillaris HOM05D000536 ORTHO05D001674 1.9e-06 55.5 46 63.0
Duzib170G0650 Durio zibethinus HOM05D000536 ORTHO05D001674 2.5e-06 55.1 46 65.2
CAN.G162.107 Capsicum annuum HOM05D000536 ORTHO05D001674 5.6e-06 53.9 46 60.9
Aa31LG5G10150 Aethionema arabicum HOM05D000536 ORTHO05D001674 9.6e-06 53.1 36 75.0


User provided reference genes

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