Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 0.0e+00 1442.6 712 100.0
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.9e-210 736.5 586 64.5
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 5.7e-210 734.9 581 65.6
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 5.0e-206 721.8 644 60.2
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 1.6e-204 716.8 523 67.3
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 4.3e-202 708.8 509 69.0
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 6.3e-201 704.9 496 69.8
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 1.7e-198 696.8 672 57.4
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 2.4e-192 676.4 553 62.4
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 1.3e-190 670.6 507 65.9
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 3.8e-190 669.1 656 56.7
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 3.6e-188 662.5 657 54.9
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 1.5e-186 657.1 455 69.7
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 4.8e-185 652.1 545 61.1
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 1.8e-184 650.2 494 65.2
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 3.1e-184 649.4 567 58.2
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 5.3e-184 648.7 493 64.5
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 5.9e-183 645.2 657 54.3
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 1.7e-182 643.7 464 68.3
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 5.0e-182 642.1 577 58.8
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 7.2e-181 638.3 654 54.1
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 7.2e-181 638.3 595 56.8
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 3.6e-180 636.0 509 60.9
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.8e-179 633.6 509 60.7
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 7.5e-178 628.2 454 67.4
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 9.7e-178 627.9 489 64.8
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 9.7e-178 627.9 543 59.5
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 1.3e-177 627.5 602 56.0
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 1.3e-177 627.5 455 67.5
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 1.3e-177 627.5 460 66.3
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 2.8e-177 626.3 427 70.5
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 6.3e-177 625.2 547 58.3
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 8.2e-177 624.8 548 59.9
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 1.4e-176 624.0 586 57.3
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 3.1e-176 622.9 423 70.2
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 2.7e-175 619.8 463 64.6
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 3.5e-175 619.4 468 64.1
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 7.7e-175 618.2 443 65.7
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 1.0e-174 617.8 434 68.0
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 2.2e-174 616.7 507 62.1
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 2.9e-174 616.3 648 51.7
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 3.8e-174 615.9 434 67.7
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 5.0e-174 615.5 476 63.2
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 6.5e-174 615.1 567 57.3
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 1.1e-173 614.4 554 59.7
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 3.2e-173 612.8 454 66.1
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 3.6e-172 609.4 454 66.7
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 3.6e-172 609.4 464 63.8
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 4.0e-171 605.9 469 63.8
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 5.2e-171 605.5 507 59.6
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 4.4e-170 602.4 417 67.4
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 2.8e-169 599.7 526 58.4
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 3.1e-168 596.3 554 56.5
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 1.3e-166 590.9 423 65.5
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 2.1e-164 583.6 457 63.5
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 2.1e-164 583.6 463 61.6
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 1.4e-163 580.9 468 61.5
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 8.9e-163 578.2 468 61.5
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 4.1e-160 569.3 582 52.9
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 5.4e-160 568.9 483 58.6
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 1.5e-157 560.8 431 63.3
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 2.5e-157 560.1 505 56.4
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 3.3e-157 559.7 408 64.7
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 1.6e-156 557.4 477 58.7
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 5.4e-152 542.3 471 57.5
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.6e-151 540.8 431 61.7
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 1.6e-151 540.8 371 70.1
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 3.0e-134 483.4 372 64.0
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 1.9e-128 464.2 476 53.2
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 2.1e-119 434.1 291 72.2
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 1.8e-115 421.0 460 48.5
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 1.3e-100 371.7 276 64.9
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 4.9e-97 359.8 279 64.2
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 2.1e-87 327.8 401 50.1
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 8.5e-81 305.8 327 56.0
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 4.2e-80 303.5 311 51.8
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 6.1e-79 299.7 370 45.4
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 8.8e-78 295.8 282 58.2
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 3.0e-62 244.2 280 47.5
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 2.2e-60 238.0 192 60.4
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 9.5e-40 169.5 133 56.4
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 3.4e-37 161.0 145 59.3
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 3.3e-32 144.4 135 56.3
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 1.5e-29 135.6 501 25.7
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 1.4e-27 129.0 78 73.1
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 9.2e-27 126.3 127 57.5
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 2.2e-20 105.1 126 46.0
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 7.3e-16 90.1 88 51.1
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 6.8e-14 83.6 191 35.6
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 1.3e-12 79.3 74 50.0
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 1.7e-12 79.0 88 47.7
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 8.4e-12 76.6 165 32.1
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 3.2e-11 74.7 57 57.9
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 4.2e-11 74.3 185 31.4
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 3.1e-06 58.2 58 46.6


User provided reference genes

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