Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G310 Amborella trichopoda HOM05D001121 ORTHO05D066293 1.4e-59 232.6 112 100.0
ATR0618G262 Amborella trichopoda HOM05D001121 ORTHO05D009820 4.2e-27 124.8 75 78.7
ATR0693G335 Amborella trichopoda HOM05D001121 ORTHO05D009820 1.4e-22 109.8 75 69.3
Migut.N00794 Erythranthe guttata HOM05D001121 ORTHO05D009820 2.3e-09 65.9 59 47.5
Actinidia16093 Actinidia chinensis HOM05D001121 ORTHO05D009820 8.8e-09 63.9 59 50.8
Aqoxy4G02583 Aquilegia oxysepala HOM05D001121 ORTHO05D009820 8.8e-09 63.9 78 39.7
Oeu056141.1 Olea europaea HOM05D001121 ORTHO05D009820 8.8e-09 63.9 59 47.5
EL10Ac7g16164 Beta vulgaris HOM05D001121 ORTHO05D009820 1.2e-08 63.5 62 40.3
Psat5g158840 Pisum sativum HOM05D001121 ORTHO05D009820 1.2e-08 63.5 65 49.2
Ah.08g221160 Amaranthus hybridus HOM05D001121 ORTHO05D009820 2.0e-08 62.8 59 40.7
Lj6g0023051 Lotus japonicus HOM05D001121 ORTHO05D009820 2.6e-08 62.4 65 50.8
AUR62020127 Chenopodium quinoa HOM05D001121 ORTHO05D009820 3.4e-08 62.0 59 42.4
Ciclev10030323m.g Citrus clementina HOM05D001121 ORTHO05D009820 3.4e-08 62.0 68 45.6
PSO384G0680 Papaver somniferum HOM05D001121 ORTHO05D009820 3.4e-08 62.0 59 45.8
AUR62001649 Chenopodium quinoa HOM05D001121 ORTHO05D009820 4.4e-08 61.6 59 42.4
Nn5g28187 Nelumbo nucifera HOM05D001121 ORTHO05D009820 7.5e-08 60.8 61 50.8
Sabra09G0032900 Salix brachista HOM05D000872 ORTHO05D009820 9.8e-08 60.5 64 45.3
Sc21g0006310 Simmondsia chinensis HOM05D001121 ORTHO05D009820 9.8e-08 60.5 59 40.7
SGA_v2.0_scaffold120G32914 Striga asiatica HOM05D001121 ORTHO05D009820 9.8e-08 60.5 70 41.4
CSS0037414 Camellia sinensis var. sinensis HOM05D001121 ORTHO05D009820 1.3e-07 60.1 59 47.5
CSS0049105 Camellia sinensis var. sinensis HOM05D001121 ORTHO05D009820 1.3e-07 60.1 59 47.5
vmacro02963 Vaccinium macrocarpon HOM05D001121 ORTHO05D009820 1.7e-07 59.7 62 48.4
CANSAT54G1790 Cannabis sativa HOM05D001121 ORTHO05D009820 2.2e-07 59.3 60 48.3
Manes.02G119700 Manihot esculenta HOM05D001121 ORTHO05D009820 2.2e-07 59.3 59 44.1
PSO339G0032 Papaver somniferum HOM05D001121 ORTHO05D009820 2.2e-07 59.3 59 44.1
arahy.Tifrunner.gnm1.ann1.H3R2DZ Arachis hypogaea HOM05D001121 ORTHO05D009820 3.7e-07 58.5 57 47.4
COL.COLO4_19154 Corchorus olitorius HOM05D001121 ORTHO05D009820 3.7e-07 58.5 62 43.5
THA.LOC104799397 Tarenaya hassleriana HOM05D001121 ORTHO05D009820 4.8e-07 58.2 59 45.8
arahy.Tifrunner.gnm1.ann1.N888SE Arachis hypogaea HOM05D001121 ORTHO05D009820 6.3e-07 57.8 57 49.1
Eucgr.B02257 Eucalyptus grandis HOM05D001121 ORTHO05D009820 6.3e-07 57.8 59 44.1
Medtr3g463660 Medicago truncatula HOM05D001121 ORTHO05D009820 6.3e-07 57.8 65 43.1
Migut.B00417 Erythranthe guttata HOM05D001121 ORTHO05D001256 8.3e-07 57.4 89 33.7
Glyma.11G178800 Glycine max HOM05D001121 ORTHO05D009820 8.3e-07 57.4 59 49.2
Lj1P138T38 Lonicera japonica HOM05D001121 ORTHO05D009820 8.3e-07 57.4 82 35.4
Potri.009G045700 Populus trichocarpa HOM05D001121 ORTHO05D009820 8.3e-07 57.4 59 45.8
SalBow2G0200 Salvia bowleyana HOM05D001121 ORTHO05D009820 8.3e-07 57.4 59 40.7
Sed0016701 Sechium edule HOM05D001121 ORTHO05D009820 1.1e-06 57.0 85 36.5
BcaNung01128 Brassica carinata HOM05D001121 ORTHO05D001256 1.4e-06 56.6 99 35.4
Cfa011693 Carpinus fangiana HOM05D001121 ORTHO05D009820 1.4e-06 56.6 65 41.5
Glyma.18G063300 Glycine max HOM05D001121 ORTHO05D009820 1.4e-06 56.6 67 47.8
Gohir.A12G181000 Gossypium hirsutum HOM05D001121 ORTHO05D009820 1.8e-06 56.2 64 43.8
Nitab4.5_0000260g0040 Nicotiana tabacum HOM05D001121 ORTHO05D009820 1.8e-06 56.2 59 44.1
PGR102G0608 Punica granatum HOM05D001121 ORTHO05D009820 1.8e-06 56.2 59 44.1
Rhsim13G0069700 Rhododendron simsii HOM05D001121 ORTHO05D009820 1.8e-06 56.2 59 47.5
TPR.G21177 Trifolium pratense HOM05D001121 ORTHO05D009820 1.8e-06 56.2 65 46.2
Duzib168G0535 Durio zibethinus HOM05D001121 ORTHO05D009820 3.1e-06 55.5 59 44.1
BcaC06g32903 Brassica carinata HOM05D001121 ORTHO05D001256 4.1e-06 55.1 94 31.9
C07p53450 Brassica napus HOM05D001121 ORTHO05D001256 4.1e-06 55.1 94 31.9
Dinv44985 Davidia involucrata HOM05D001121 ORTHO05D001256 4.1e-06 55.1 83 34.9
Atru.chr3.4224 Acer truncatum HOM05D001121 ORTHO05D009820 5.4e-06 54.7 68 38.2
Gohir.D12G183700 Gossypium hirsutum HOM05D001121 ORTHO05D009820 5.4e-06 54.7 64 42.2
Gorai.008G197000 Gossypium raimondii HOM05D001121 ORTHO05D009820 5.4e-06 54.7 64 42.2
RcHm_v2.0_Chr5g0069421 Rosa chinensis HOM05D001121 ORTHO05D009820 5.4e-06 54.7 59 40.7
AL8G35030 Arabidopsis lyrata HOM05D001121 ORTHO05D009820 7.0e-06 54.3 59 42.4
AT5G58750 Arabidopsis thaliana HOM05D001121 ORTHO05D009820 7.0e-06 54.3 59 40.7
CsaV3_1G036150 Cucumis sativus L. HOM05D001121 ORTHO05D009820 7.0e-06 54.3 61 42.6
Lalb_Chr18g0050911 Lupinus albus HOM05D001121 ORTHO05D009820 7.0e-06 54.3 59 45.8
Medtr3g013890 Medicago truncatula HOM05D001121 ORTHO05D001256 7.0e-06 54.3 92 35.9
Medtr3g102730 Medicago truncatula HOM05D001121 ORTHO05D001256 7.0e-06 54.3 92 35.9
Nitab4.5_0009836g0010 Nicotiana tabacum HOM05D001121 ORTHO05D009820 7.0e-06 54.3 59 42.4
Nitab4.5_0009836g0020 Nicotiana tabacum HOM05D001121 ORTHO05D009820 7.0e-06 54.3 59 42.4
A10p15520 Brassica napus HOM05D001121 ORTHO05D009820 9.1e-06 53.9 59 42.4
C09p50830 Brassica napus HOM05D001121 ORTHO05D009820 9.1e-06 53.9 59 42.4
BraA10t43681Z Brassica rapa HOM05D001121 ORTHO05D009820 9.1e-06 53.9 59 42.4
Peaxi162Scf00774g00013 Petunia axillaris HOM05D001121 ORTHO05D009820 9.1e-06 53.9 69 36.2
TAR623G0085 Trochodendron aralioides HOM05D001121 ORTHO05D009820 9.1e-06 53.9 71 35.2


User provided reference genes

Program Settings