Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 5.5e-74 280.8 135 100.0
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 3.6e-17 92.0 133 45.1
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 1.5e-15 86.7 133 44.4
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 7.6e-15 84.3 129 43.4
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 1.7e-14 83.2 84 52.4
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 1.1e-13 80.5 59 61.0
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 7.1e-13 77.8 128 39.1
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 1.1e-10 70.5 71 56.3
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 2.5e-10 69.3 98 41.8
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 2.5e-10 69.3 104 40.4
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 2.5e-10 69.3 54 63.0
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 1.3e-09 67.0 96 43.8
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 1.3e-09 67.0 105 37.1
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 1.6e-09 66.6 72 51.4
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 1.6e-09 66.6 72 51.4
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 1.6e-09 66.6 76 48.7
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 3.7e-09 65.5 59 55.9
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 4.8e-09 65.1 85 44.7
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 4.8e-09 65.1 87 42.5
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 6.2e-09 64.7 86 44.2
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 8.2e-09 64.3 68 48.5
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 1.1e-08 63.9 55 56.4
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 1.8e-08 63.2 117 36.8
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 2.4e-08 62.8 49 57.1
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 2.4e-08 62.8 72 51.4
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 3.1e-08 62.4 123 37.4
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 4.0e-08 62.0 62 51.6
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 6.9e-08 61.2 61 55.7
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 9.0e-08 60.8 61 55.7
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 9.0e-08 60.8 73 47.9
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 9.0e-08 60.8 55 52.7
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 1.2e-07 60.5 68 50.0
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 1.5e-07 60.1 69 50.7
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 1.5e-07 60.1 36 75.0
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 2.0e-07 59.7 54 57.4
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 2.0e-07 59.7 73 49.3
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 2.6e-07 59.3 59 52.5
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 3.4e-07 58.9 58 48.3
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 3.4e-07 58.9 65 53.8
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 4.5e-07 58.5 47 63.8
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 4.5e-07 58.5 70 48.6
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 4.5e-07 58.5 72 45.8
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 4.5e-07 58.5 72 45.8
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 5.8e-07 58.2 67 44.8
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 5.8e-07 58.2 74 44.6
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 5.8e-07 58.2 65 44.6
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 5.8e-07 58.2 62 46.8
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 5.8e-07 58.2 31 77.4
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 7.6e-07 57.8 61 55.7
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 7.6e-07 57.8 69 49.3
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 7.6e-07 57.8 128 35.2
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 7.6e-07 57.8 81 42.0
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 1.0e-06 57.4 72 45.8
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.0e-06 57.4 72 45.8
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 1.3e-06 57.0 66 51.5
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 1.3e-06 57.0 31 74.2
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 1.3e-06 57.0 74 43.2
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 2.2e-06 56.2 127 36.2
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 2.2e-06 56.2 30 76.7
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 2.9e-06 55.8 53 50.9
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 2.9e-06 55.8 65 52.3
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 3.8e-06 55.5 84 39.3
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 4.9e-06 55.1 31 74.2
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 4.9e-06 55.1 31 74.2
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 4.9e-06 55.1 35 71.4
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 4.9e-06 55.1 73 45.2
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 6.5e-06 54.7 124 37.9
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 6.5e-06 54.7 36 63.9
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 8.4e-06 54.3 63 47.6
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 8.4e-06 54.3 47 55.3


User provided reference genes

Program Settings