Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G301 Amborella trichopoda HOM05D006893 ORTHO05D008495 1.9e-110 402.9 261 100.0
Aqoxy2G02860 Aquilegia oxysepala HOM05D006893 ORTHO05D008495 1.1e-30 137.9 253 47.8
TAR362G0125 Trochodendron aralioides HOM05D006893 ORTHO05D008495 1.9e-30 137.1 248 48.8
Nn3g21581 Nelumbo nucifera HOM05D006893 ORTHO05D008495 2.1e-29 133.7 244 44.7
MBI18_g04566_MAGBIO Magnolia biondii HOM05D006893 ORTHO05D008495 6.8e-28 128.6 246 47.2
Dinv44337 Davidia involucrata HOM05D006893 ORTHO05D008495 8.9e-28 128.3 260 49.2
TAR365G1113 Trochodendron aralioides HOM05D006893 ORTHO05D008495 1.7e-26 124.0 261 43.7
Cpa.g.sc9.112 Carica papaya HOM05D006893 ORTHO05D008495 2.9e-26 123.2 255 42.0
TAR371G1102 Trochodendron aralioides HOM05D006893 ORTHO05D008495 4.9e-26 122.5 289 40.1
TAR636G3297 Trochodendron aralioides HOM05D006893 ORTHO05D008495 4.9e-26 122.5 289 40.1
Nn4g25705 Nelumbo nucifera HOM05D006893 ORTHO05D008495 1.1e-25 121.3 249 43.4
CiPaw.01G144100 Carya illinoinensis HOM05D006893 ORTHO05D008495 2.4e-25 120.2 249 47.0
Potri.010G005300 Populus trichocarpa HOM05D006893 ORTHO05D008495 3.5e-24 116.3 250 45.6
Sabra10G0004500 Salix brachista HOM05D006893 ORTHO05D008495 6.0e-24 115.5 251 47.0
CiPaw.02G078700 Carya illinoinensis HOM05D006893 ORTHO05D008495 2.1e-21 107.1 249 49.4
Actinidia40309 Actinidia chinensis HOM05D006893 ORTHO05D008495 6.2e-21 105.5 291 41.6
Dinv29707 Davidia involucrata HOM05D006893 ORTHO05D008495 8.1e-21 105.1 293 42.0
Eucgr.H03971 Eucalyptus grandis HOM05D006893 ORTHO05D008495 8.1e-21 105.1 273 48.7
Thecc.04G291400 Theobroma cacao HOM05D006893 ORTHO05D008495 1.4e-20 104.4 274 44.2
Lj6C683T11 Lonicera japonica HOM05D006893 ORTHO05D008495 8.9e-20 101.7 211 50.7
Cfa015452 Carpinus fangiana HOM05D006893 ORTHO05D008495 2.0e-19 100.5 267 42.3
Haze_01136 Corylus avellana HOM05D006893 ORTHO05D008495 2.0e-19 100.5 261 42.1
TWI53G1979 Tripterygium wilfordii HOM05D006893 ORTHO05D008495 2.0e-19 100.5 250 36.4
Cc03_g01320 Coffea canephora HOM05D006893 ORTHO05D008495 2.6e-19 100.1 275 41.5
Manes.03G200250 Manihot esculenta HOM05D006893 ORTHO05D008495 2.6e-19 100.1 261 41.0
Oeu033816.1 Olea europaea HOM05D006893 ORTHO05D008495 4.4e-19 99.4 248 33.1
Prupe.1G129100 Prunus persica HOM05D006893 ORTHO05D008495 9.8e-19 98.2 262 37.4
Duzib212G0998 Durio zibethinus HOM05D006893 ORTHO05D008495 1.7e-18 97.4 269 40.9
Hma1.2p1_1352F.1_g277580 Hydrangea macrophylla HOM05D006893 ORTHO05D008495 1.7e-18 97.4 326 36.5
FvH4_4g18950 Fragaria vesca HOM05D006893 ORTHO05D008495 2.2e-18 97.1 278 45.3
FAN12G3246 Fragaria x ananassa HOM05D006893 ORTHO05D008495 2.2e-18 97.1 278 45.3
FAN12G4353 Fragaria x ananassa HOM05D006893 ORTHO05D008495 2.2e-18 97.1 278 45.3
PSO170G0180 Papaver somniferum HOM05D006893 ORTHO05D008495 2.9e-18 96.7 260 45.4
GSVIVG01035078001 Vitis vinifera HOM05D006893 ORTHO05D008495 2.9e-18 96.7 283 35.0
Duzib052G0831 Durio zibethinus HOM05D006893 ORTHO05D008495 3.7e-18 96.3 275 37.8
PSO407G0319 Papaver somniferum HOM05D006893 ORTHO05D008495 4.9e-18 95.9 257 42.4
Manes.15G008800 Manihot esculenta HOM05D006893 ORTHO05D008495 2.4e-17 93.6 283 38.9
TWI09G0148 Tripterygium wilfordii HOM05D006893 ORTHO05D008495 4.1e-17 92.8 317 31.5
Ciclev10005318m.g Citrus clementina HOM05D006893 ORTHO05D008495 9.2e-17 91.7 317 38.5
Aqoxy22s005 Aquilegia oxysepala HOM05D006893 ORTHO05D008495 1.2e-16 91.3 52 71.2
FAN07G1462 Fragaria x ananassa HOM05D006893 ORTHO05D008495 1.2e-16 91.3 280 48.6
Migut.N00064 Erythranthe guttata HOM05D006893 ORTHO05D008495 1.6e-16 90.9 296 48.3
Gorai.005G062300 Gossypium raimondii HOM05D006893 ORTHO05D008495 2.1e-16 90.5 272 39.3
RcHm_v2.0_Chr4g0423841 Rosa chinensis HOM05D006893 ORTHO05D008495 3.5e-16 89.7 282 46.1
Atru.chr4.2934 Acer truncatum HOM05D006893 ORTHO05D008495 7.8e-16 88.6 51 68.6
EL10Ac3g04934 Beta vulgaris HOM05D006893 ORTHO05D008495 1.3e-15 87.8 51 68.6
Hma1.2p1_0013F.1_g009095 Hydrangea macrophylla HOM05D006893 ORTHO05D008495 1.7e-15 87.4 51 72.5
MD16G1161600 Malus domestica HOM05D006893 ORTHO05D008495 1.7e-15 87.4 317 34.1
COL.COLO4_34693 Corchorus olitorius HOM05D006893 ORTHO05D008495 3.0e-15 86.7 51 70.6
Glyma.17G029900 Glycine max HOM05D006893 ORTHO05D008495 5.1e-15 85.9 261 45.2
vmacro08097 Vaccinium macrocarpon HOM05D006893 ORTHO05D008495 5.1e-15 85.9 309 43.4
MELO3C006691.2 Cucumis melo HOM05D006893 ORTHO05D008495 6.6e-15 85.5 51 66.7
CsaV3_3G014950 Cucumis sativus L. HOM05D006893 ORTHO05D008495 6.6e-15 85.5 51 66.7
Gohir.D02G056400 Gossypium hirsutum HOM05D006893 ORTHO05D008495 6.6e-15 85.5 273 39.6
Nitab4.5_0002755g0070 Nicotiana tabacum HOM05D006893 ORTHO05D008495 1.5e-14 84.3 328 29.3
ClCG05G006320 Citrullus lanatus HOM05D006893 ORTHO05D008495 1.9e-14 84.0 49 69.4
Gohir.A02G051500 Gossypium hirsutum HOM05D006893 ORTHO05D008495 1.9e-14 84.0 275 38.2
Sed0012680 Sechium edule HOM05D006893 ORTHO05D008495 1.9e-14 84.0 49 69.4
Rhsim04G0228400 Rhododendron simsii HOM05D006893 ORTHO05D008495 2.5e-14 83.6 315 38.7
AUR62035073 Chenopodium quinoa HOM05D006893 ORTHO05D008495 3.3e-14 83.2 50 68.0
DCAR_023309 Daucus carota HOM05D006893 ORTHO05D008495 4.3e-14 82.8 51 66.7
Gohir.A10G167700 Gossypium hirsutum HOM05D006893 ORTHO05D008495 5.6e-14 82.4 265 29.1
MD13G1161800 Malus domestica HOM05D006893 ORTHO05D008495 7.3e-14 82.0 52 65.4
Nitab4.5_0000306g0330 Nicotiana tabacum HOM05D006893 ORTHO05D008495 7.3e-14 82.0 328 33.2
SGA_v2.0_scaffold146G36231 Striga asiatica HOM05D006893 ORTHO05D008495 9.5e-14 81.6 286 33.2
THA.LOC104823747 Tarenaya hassleriana HOM05D006893 ORTHO05D008495 9.5e-14 81.6 51 68.6
HanXRQChr03g0084941 Helianthus annuus HOM05D006893 ORTHO05D008495 1.2e-13 81.3 46 71.7
Oeu016262.1 Olea europaea HOM05D006893 ORTHO05D008495 1.6e-13 80.9 251 40.6
ECA240G3740 Erigeron canadensis HOM05D006893 ORTHO05D008495 2.1e-13 80.5 51 62.7
MBI19_g05148_MAGBIO Magnolia biondii HOM05D006893 ORTHO05D008495 2.8e-13 80.1 250 43.6
PGR004G1654 Punica granatum HOM05D006893 ORTHO05D008495 3.6e-13 79.7 318 33.0
CAN.G14.14 Capsicum annuum HOM05D006893 ORTHO05D008495 4.7e-13 79.3 335 29.9
Lsat_1_v5_gn_3_21921 Lactuca sativa HOM05D006893 ORTHO05D008495 4.7e-13 79.3 50 64.0
QL06p010948 Quercus lobata HOM05D006893 ORTHO05D008495 4.7e-13 79.3 263 41.4
Solyc01g065690.3 Solanum lycopersicum HOM05D006893 ORTHO05D008495 6.2e-13 79.0 51 62.7
PGSC0003DMG400006243 Solanum tuberosum HOM05D006893 ORTHO05D008495 6.2e-13 79.0 51 62.7
arahy.Tifrunner.gnm1.ann1.8F5MWG Arachis hypogaea HOM05D006893 ORTHO05D008495 8.1e-13 78.6 262 32.8
MSTRG.21783 Avicennia marina HOM05D006893 ORTHO05D008495 8.1e-13 78.6 51 62.7
VMungo1215G1370 Vigna mungo HOM05D000322 ORTHO05D000186 1.1e-12 78.2 258 35.7
Oeu028327.1 Olea europaea HOM05D006893 ORTHO05D008495 1.4e-12 77.8 52 63.5
Phvul.003G108900 Phaseolus vulgaris HOM05D006893 ORTHO05D008495 1.4e-12 77.8 258 39.9
Glyma.07G244000 Glycine max HOM05D006893 ORTHO05D008495 2.3e-12 77.0 255 31.0
Peaxi162Scf00065g01019 Petunia axillaris HOM05D006893 ORTHO05D008495 3.1e-12 76.6 50 60.0
SalBow2G1430 Salvia bowleyana HOM05D006893 ORTHO05D008495 3.1e-12 76.6 60 56.7
CANSAT78G1743 Cannabis sativa HOM05D006893 ORTHO05D008495 4.0e-12 76.3 53 64.2
Sopen01g027090 Solanum pennellii HOM05D006893 ORTHO05D008495 4.0e-12 76.3 50 62.0
MSTRG.3881 Avicennia marina HOM05D006893 ORTHO05D008495 5.2e-12 75.9 247 26.7
Glyma.15G146700 Glycine max HOM05D006893 ORTHO05D008495 6.8e-12 75.5 51 64.7
Hund03092 Selenicereus undatus HOM05D006893 ORTHO05D008495 8.9e-12 75.1 51 60.8
arahy.Tifrunner.gnm1.ann1.IR9GWY Arachis hypogaea HOM05D006893 ORTHO05D008495 7.6e-11 72.0 51 56.9
Gorai.011G194300 Gossypium raimondii HOM05D006893 ORTHO05D008495 7.6e-11 72.0 50 64.0
Lalb_Chr07g0182231 Lupinus albus HOM05D006893 ORTHO05D008495 3.8e-10 69.7 245 24.9
arahy.Tifrunner.gnm1.ann1.A55GHP Arachis hypogaea HOM05D006893 ORTHO05D008495 4.9e-10 69.3 51 58.8
Os01g0309800 Oryza sativa ssp. japonica HOM05D006893 ORTHO05D008495 4.9e-10 69.3 244 37.3
Ca_21468_v3 Cicer arietinum L. HOM05D006893 ORTHO05D008495 8.4e-10 68.6 255 27.8
Ca_21502_v3 Cicer arietinum L. HOM05D006893 ORTHO05D008495 8.4e-10 68.6 255 27.8
ECA246G0139 Erigeron canadensis HOM05D006893 ORTHO05D008495 8.4e-10 68.6 52 61.5
AUR62016159 Chenopodium quinoa HOM05D006893 ORTHO05D008495 1.1e-09 68.2 51 56.9
Gohir.D10G173750 Gossypium hirsutum HOM05D006893 ORTHO05D008495 1.1e-09 68.2 50 60.0
Lj4g0003398 Lotus japonicus HOM05D006893 ORTHO05D008495 4.1e-09 66.2 54 55.6
Lj4g0016264 Lotus japonicus HOM05D006893 ORTHO05D008495 4.1e-09 66.2 54 55.6
PSO357G0434 Papaver somniferum HOM05D006893 ORTHO05D008495 4.1e-09 66.2 52 57.7
Duzib151G1176 Durio zibethinus HOM05D006893 ORTHO05D008495 5.4e-09 65.9 39 66.7
PGR031G0547 Punica granatum HOM05D006893 ORTHO05D008495 3.5e-08 63.2 51 52.9
PSO170G5603 Papaver somniferum HOM05D006893 ORTHO05D008495 7.8e-08 62.0 52 55.8
CDE11G0221 Ceratophyllum demersum HOM05D006893 ORTHO05D008495 1.0e-07 61.6 248 25.8
SEGI_03375 Sequoiadendron giganteum HOM05D064531 ORTHO05D050945 1.3e-07 61.2 51 54.9
Psat4g024920 Pisum sativum HOM05D006893 ORTHO05D008495 6.6e-07 58.9 262 23.7
CDE05G0963 Ceratophyllum demersum HOM05D006893 ORTHO05D008495 1.1e-06 58.2 248 26.6
TPR.G4842 Trifolium pratense HOM05D006893 ORTHO05D008495 1.9e-06 57.4 50 54.0
Ah.04g155120 Amaranthus hybridus HOM05D006893 ORTHO05D008495 2.5e-06 57.0 38 57.9
Medtr4g120750 Medicago truncatula HOM05D006893 ORTHO05D008495 2.5e-06 57.0 55 50.9
HPP92_013737 Vanilla planifolia HOM05D005189 ORTHO05D006093 3.3e-06 56.6 46 56.5
Zm00001eb130400 Zea mays HOM05D006893 ORTHO05D008495 4.3e-06 56.2 259 36.7


User provided reference genes

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