Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 9.8e-130 466.8 242 100.0
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 5.8e-66 255.0 230 59.1
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 8.4e-65 251.1 237 59.9
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 1.6e-63 246.9 236 55.9
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 4.6e-63 245.4 230 53.9
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 7.9e-63 244.6 230 54.8
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 7.9e-63 244.6 237 55.7
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 2.3e-62 243.0 236 50.8
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 5.1e-62 241.9 238 53.4
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 6.7e-62 241.5 237 54.4
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.9e-61 240.0 231 54.5
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 3.3e-61 239.2 230 54.8
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 5.7e-61 238.4 237 52.3
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 9.6e-61 237.7 236 53.8
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.3e-60 237.3 231 54.5
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 1.6e-60 236.9 236 54.7
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 1.6e-60 236.9 231 53.7
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 2.1e-60 236.5 232 54.7
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 2.1e-60 236.5 240 53.3
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 4.8e-60 235.3 240 52.5
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 8.2e-60 234.6 230 52.6
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 1.1e-59 234.2 231 52.8
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 1.1e-59 234.2 232 53.4
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 1.1e-59 234.2 239 51.0
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 1.4e-59 233.8 230 51.7
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 1.4e-59 233.8 231 54.5
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 1.4e-59 233.8 237 51.5
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.8e-59 233.4 231 55.0
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.4e-59 233.0 236 51.7
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 2.4e-59 233.0 230 51.7
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 2.4e-59 233.0 230 51.3
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 3.1e-59 232.6 236 51.7
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 3.1e-59 232.6 228 52.6
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 3.1e-59 232.6 230 52.6
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 4.1e-59 232.3 231 52.4
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 4.1e-59 232.3 236 51.7
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 5.3e-59 231.9 231 54.5
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 6.9e-59 231.5 230 52.6
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.5e-58 230.3 230 51.3
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 2.6e-58 229.6 231 53.7
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 2.6e-58 229.6 237 53.2
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 4.5e-58 228.8 236 51.3
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 4.5e-58 228.8 233 54.5
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 5.8e-58 228.4 231 51.9
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 5.8e-58 228.4 230 54.3
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 5.8e-58 228.4 236 51.7
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 7.6e-58 228.0 231 51.5
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 7.6e-58 228.0 225 52.4
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 1.3e-57 227.3 230 50.4
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 1.3e-57 227.3 230 52.2
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 1.7e-57 226.9 244 49.2
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 2.2e-57 226.5 230 53.5
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 2.2e-57 226.5 232 52.6
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 2.2e-57 226.5 236 49.6
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 2.9e-57 226.1 230 51.3
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 3.8e-57 225.7 231 52.8
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 3.8e-57 225.7 230 53.0
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 6.5e-57 224.9 233 50.6
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 6.5e-57 224.9 230 53.0
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 8.4e-57 224.6 230 51.3
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 1.1e-56 224.2 231 51.9
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 1.4e-56 223.8 230 49.6
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 1.4e-56 223.8 237 52.3
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 1.9e-56 223.4 233 51.1
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 1.9e-56 223.4 233 51.5
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 3.2e-56 222.6 237 52.3
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 3.2e-56 222.6 232 51.7
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 3.2e-56 222.6 228 52.6
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 3.2e-56 222.6 230 51.3
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 4.2e-56 222.2 236 47.5
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 5.5e-56 221.9 233 50.6
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 5.5e-56 221.9 230 47.8
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 5.5e-56 221.9 231 52.8
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 7.2e-56 221.5 230 49.1
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 7.2e-56 221.5 231 55.0
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 9.3e-56 221.1 237 51.9
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 9.3e-56 221.1 236 50.0
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 1.2e-55 220.7 234 49.1
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 1.2e-55 220.7 234 51.7
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.2e-55 220.7 237 52.3
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.2e-55 220.7 237 51.9
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.2e-55 220.7 230 47.8
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 2.1e-55 219.9 231 54.1
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 2.1e-55 219.9 234 50.4
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 2.7e-55 219.5 233 51.5
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 4.6e-55 218.8 233 49.8
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 4.6e-55 218.8 237 48.9
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 6.1e-55 218.4 236 49.2
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 6.1e-55 218.4 230 50.0
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 1.0e-54 217.6 234 50.4
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 1.1e-53 214.2 236 48.3
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 1.1e-53 214.2 219 51.1
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 4.3e-53 212.2 230 46.5
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 7.4e-53 211.5 236 48.7
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 1.3e-52 210.7 234 48.3
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 2.8e-52 209.5 232 47.8
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 4.8e-52 208.8 236 47.0
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 1.1e-51 207.6 232 48.3
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 2.4e-51 206.5 236 46.6
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 7.7e-50 201.4 211 50.7
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 5.0e-49 198.7 176 62.5
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 1.9e-48 196.8 233 46.8
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 1.2e-47 194.1 206 50.5
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 9.7e-45 184.5 177 51.4
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 1.2e-31 141.0 164 47.6
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 8.2e-28 128.3 144 45.1
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.1e-24 117.9 151 43.0
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 1.1e-19 101.3 104 52.9
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 3.2e-16 89.7 108 44.4
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 1.4e-14 84.3 227 27.3
SMO300G0012 Selaginella moellendorffii HOM05D006917 ORTHO05D008297 7.7e-10 68.6 224 26.8
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 2.9e-09 66.6 73 47.9
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 8.9e-06 55.1 65 55.4


User provided reference genes

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