Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 5.3e-75 284.3 143 100.0
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 2.1e-39 166.0 106 77.4
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 6.1e-39 164.5 116 68.1
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 2.3e-38 162.5 131 63.4
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 8.9e-38 160.6 121 65.3
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 2.0e-37 159.5 96 77.1
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 3.4e-37 158.7 112 72.3
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 7.5e-37 157.5 104 72.1
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 7.5e-37 157.5 106 72.6
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 1.7e-36 156.4 118 66.1
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 2.2e-36 156.0 100 74.0
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 2.8e-36 155.6 141 61.0
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.4e-35 153.3 112 66.1
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.8e-35 152.9 121 66.9
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 3.1e-35 152.1 136 60.3
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 4.1e-35 151.8 134 63.4
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 4.1e-35 151.8 133 59.4
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 4.1e-35 151.8 90 80.0
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 5.4e-35 151.4 103 71.8
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 5.4e-35 151.4 106 73.6
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 5.4e-35 151.4 104 72.1
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 5.4e-35 151.4 103 72.8
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 7.0e-35 151.0 134 63.4
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 7.0e-35 151.0 84 84.5
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 7.0e-35 151.0 112 66.1
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 9.2e-35 150.6 119 64.7
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 9.2e-35 150.6 130 60.8
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 9.2e-35 150.6 82 85.4
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 1.2e-34 150.2 115 67.0
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 1.6e-34 149.8 98 75.5
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 1.6e-34 149.8 91 81.3
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 1.6e-34 149.8 131 61.8
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 2.0e-34 149.4 113 66.4
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 2.0e-34 149.4 104 73.1
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 2.7e-34 149.1 95 75.8
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 2.7e-34 149.1 104 71.2
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 3.5e-34 148.7 108 68.5
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 3.5e-34 148.7 112 64.3
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 4.5e-34 148.3 92 79.3
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 4.5e-34 148.3 141 57.4
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 5.9e-34 147.9 116 65.5
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 5.9e-34 147.9 105 72.4
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 5.9e-34 147.9 123 61.8
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 7.8e-34 147.5 113 69.0
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 7.8e-34 147.5 109 68.8
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 7.8e-34 147.5 108 70.4
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 1.0e-33 147.1 114 66.7
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 1.0e-33 147.1 90 77.8
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 1.0e-33 147.1 111 67.6
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 1.0e-33 147.1 109 70.6
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 1.0e-33 147.1 90 76.7
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 1.3e-33 146.7 107 70.1
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 1.3e-33 146.7 107 70.1
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 1.3e-33 146.7 107 70.1
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 1.3e-33 146.7 107 70.1
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 1.3e-33 146.7 114 68.4
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 1.7e-33 146.4 109 67.9
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 1.7e-33 146.4 113 69.0
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 1.7e-33 146.4 118 66.9
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 1.7e-33 146.4 128 61.7
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 2.3e-33 146.0 105 71.4
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 2.3e-33 146.0 112 65.2
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 2.3e-33 146.0 122 60.7
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 2.3e-33 146.0 122 62.3
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 3.8e-33 145.2 114 65.8
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 3.8e-33 145.2 84 81.0
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 3.8e-33 145.2 132 60.6
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 5.0e-33 144.8 88 79.5
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 8.6e-33 144.1 90 75.6
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 8.6e-33 144.1 90 75.6
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 1.1e-32 143.7 131 58.0
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.5e-32 143.3 96 76.0
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.5e-32 143.3 88 79.5
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 2.5e-32 142.5 110 63.6
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 3.3e-32 142.1 90 74.4
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 3.3e-32 142.1 108 67.6
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 5.6e-32 141.4 114 63.2
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 5.6e-32 141.4 82 80.5
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 7.3e-32 141.0 82 80.5
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 7.3e-32 141.0 82 80.5
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 9.5e-32 140.6 85 78.8
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 9.5e-32 140.6 85 78.8
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 1.2e-31 140.2 82 79.3
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 2.1e-31 139.4 118 61.9
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 2.1e-31 139.4 133 54.9
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 3.6e-31 138.7 127 60.6
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 3.6e-31 138.7 123 61.0
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 3.6e-31 138.7 82 79.3
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 8.0e-31 137.5 108 65.7
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 1.8e-30 136.3 85 75.3
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 3.0e-30 135.6 98 69.4
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 5.8e-29 131.3 95 69.5
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 5.8e-29 131.3 77 76.6
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 2.9e-28 129.0 80 73.8
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 8.3e-28 127.5 74 79.7
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 2.0e-26 122.9 76 75.0
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 2.7e-26 122.5 71 80.3
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 6.0e-26 121.3 109 60.6
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 6.6e-25 117.9 75 74.7
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 7.3e-24 114.4 86 69.8
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 1.7e-20 103.2 75 66.7
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 6.0e-18 94.7 100 55.0
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.5e-16 90.1 50 82.0
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 9.9e-13 77.4 69 63.8
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 2.9e-12 75.9 49 77.6
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 5.2e-06 55.1 56 55.4


User provided reference genes

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