Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 5.6e-59 230.7 114 100.0
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 1.3e-28 129.8 87 72.4
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 7.3e-27 124.0 87 71.3
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 1.6e-26 122.9 87 71.3
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 6.2e-26 120.9 87 69.0
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 1.4e-25 119.8 87 69.0
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.8e-25 119.4 87 63.2
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 1.8e-25 119.4 90 66.7
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 1.8e-25 119.4 93 64.5
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 5.2e-25 117.9 87 67.8
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 5.2e-25 117.9 87 67.8
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 3.4e-24 115.2 92 65.2
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 5.8e-24 114.4 89 66.3
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 9.9e-24 113.6 91 64.8
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 9.9e-24 113.6 91 64.8
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 1.3e-23 113.2 87 65.5
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 1.7e-23 112.8 89 64.0
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 3.8e-23 111.7 90 61.1
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 3.8e-23 111.7 86 60.5
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 4.9e-23 111.3 88 65.9
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 6.4e-23 110.9 88 61.4
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 6.4e-23 110.9 96 60.4
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 8.4e-23 110.5 94 62.8
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 1.1e-22 110.2 90 65.6
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 1.4e-22 109.8 93 65.6
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 1.4e-22 109.8 92 66.3
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.4e-22 109.8 91 63.7
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 2.4e-22 109.0 85 65.9
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 3.2e-22 108.6 93 62.4
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 4.2e-22 108.2 90 60.0
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 4.2e-22 108.2 97 59.8
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 4.2e-22 108.2 88 64.8
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 4.2e-22 108.2 94 60.6
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 7.1e-22 107.5 76 64.5
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 9.3e-22 107.1 91 62.6
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 9.3e-22 107.1 97 59.8
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 2.1e-21 105.9 87 64.4
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 2.1e-21 105.9 86 61.6
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 2.7e-21 105.5 92 62.0
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 2.7e-21 105.5 95 61.1
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.7e-21 105.5 95 61.1
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 2.7e-21 105.5 88 60.2
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 3.5e-21 105.1 82 61.0
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 3.5e-21 105.1 87 60.9
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 4.6e-21 104.8 93 60.2
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 4.6e-21 104.8 90 58.9
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 7.8e-21 104.0 87 63.2
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 1.0e-20 103.6 78 64.1
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 1.3e-20 103.2 89 65.2
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 1.3e-20 103.2 93 55.9
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 2.3e-20 102.4 82 58.5
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 3.0e-20 102.1 87 57.5
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 3.0e-20 102.1 80 62.5
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 3.9e-20 101.7 64 75.0
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 6.6e-20 100.9 80 62.5
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 1.1e-19 100.1 90 54.4
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 1.1e-19 100.1 90 54.4
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 1.1e-19 100.1 90 54.4
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 1.1e-19 100.1 90 54.4
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 1.1e-19 100.1 90 54.4
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 1.1e-19 100.1 98 55.1
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 1.1e-19 100.1 85 58.8
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 1.1e-19 100.1 98 54.1
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 1.5e-19 99.8 87 55.2
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 1.5e-19 99.8 92 57.6
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 1.9e-19 99.4 94 61.7
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 2.5e-19 99.0 89 52.8
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 3.3e-19 98.6 85 56.5
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 3.3e-19 98.6 86 60.5
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 4.3e-19 98.2 62 74.2
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 5.6e-19 97.8 78 60.3
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 9.6e-19 97.1 93 60.2
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 9.6e-19 97.1 62 72.6
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 9.6e-19 97.1 62 72.6
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 9.6e-19 97.1 68 67.6
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 2.1e-18 95.9 92 57.6
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 6.2e-18 94.4 87 55.2
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 8.1e-18 94.0 58 75.9
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 1.1e-17 93.6 61 73.8
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 3.1e-17 92.0 120 45.8
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 5.3e-17 91.3 98 52.0
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 9.0e-17 90.5 89 52.8
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.0e-16 89.4 91 56.0
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 2.6e-16 89.0 57 70.2
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 2.6e-16 89.0 92 50.0
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 1.3e-15 86.7 83 54.2
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 2.2e-15 85.9 85 54.1
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 2.9e-15 85.5 93 48.4
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 2.9e-15 85.5 83 59.0
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 8.4e-15 84.0 86 50.0
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 2.4e-14 82.4 57 64.9
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 4.2e-14 81.6 120 42.5
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 7.1e-14 80.9 70 55.7
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 2.1e-13 79.3 86 45.3
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 3.5e-13 78.6 123 39.8
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 6.0e-13 77.8 87 54.0
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 1.8e-12 76.3 42 83.3
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 1.9e-11 72.8 84 46.4
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 7.4e-11 70.9 70 45.7
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 2.8e-10 68.9 46 71.7
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 2.6e-08 62.4 57 50.9
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 3.4e-08 62.0 109 41.3
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 3.4e-08 62.0 109 41.3
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 1.7e-07 59.7 65 50.8
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 2.9e-07 58.9 164 32.3


User provided reference genes

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