Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 1.2e-200 703.4 453 100.0
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.7e-13 81.6 135 45.2
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.4e-12 77.8 135 44.4
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.5e-11 75.1 163 41.7
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 2.0e-11 74.7 135 43.7
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 2.6e-11 74.3 137 40.1
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 3.5e-11 73.9 136 41.9
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.5e-11 73.9 87 46.0
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 5.9e-11 73.2 135 39.3
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 5.9e-11 73.2 136 40.4
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 1.0e-10 72.4 139 43.9
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.7e-10 71.6 153 41.8
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 2.9e-10 70.9 154 42.2
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 3.8e-10 70.5 139 42.4
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 3.8e-10 70.5 142 36.6
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 3.8e-10 70.5 137 43.1
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 5.0e-10 70.1 155 42.6
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 5.0e-10 70.1 152 38.8
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 8.5e-10 69.3 155 41.3
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.1e-09 68.9 146 38.4
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.5e-09 68.6 140 40.0
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 3.2e-09 67.4 139 41.0
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 3.2e-09 67.4 141 39.0
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 4.2e-09 67.0 155 41.3
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 4.2e-09 67.0 140 40.7
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 5.5e-09 66.6 129 38.0
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 5.5e-09 66.6 140 38.6
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 1.2e-08 65.5 137 41.6
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 1.2e-08 65.5 139 40.3
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 1.2e-08 65.5 106 40.6
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 1.2e-08 65.5 138 35.5
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 1.6e-08 65.1 136 37.5
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 2.1e-08 64.7 140 37.9
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 2.1e-08 64.7 138 39.1
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 3.6e-08 63.9 137 42.3
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 3.6e-08 63.9 138 40.6
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 4.7e-08 63.5 139 41.7
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 6.1e-08 63.2 139 38.8
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 6.1e-08 63.2 133 39.1
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 6.1e-08 63.2 139 36.7
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 8.0e-08 62.8 145 38.6
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 8.0e-08 62.8 131 38.9
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 8.0e-08 62.8 139 33.8
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.0e-07 62.4 147 38.1
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 1.0e-07 62.4 140 39.3
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 1.4e-07 62.0 136 43.4
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.8e-07 61.6 137 36.5
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 1.8e-07 61.6 138 39.1
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.8e-07 61.6 135 36.3
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 2.3e-07 61.2 164 37.2
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 2.3e-07 61.2 436 26.1
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 3.0e-07 60.8 136 37.5
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 3.9e-07 60.5 140 37.9
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 3.9e-07 60.5 147 40.1
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 3.9e-07 60.5 138 38.4
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 5.2e-07 60.1 143 37.8
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 5.2e-07 60.1 140 37.1
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 6.7e-07 59.7 68 48.5
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 8.8e-07 59.3 129 39.5
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 1.1e-06 58.9 135 35.6
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.1e-06 58.9 131 38.2
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 1.5e-06 58.5 168 35.7
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.5e-06 58.5 137 35.8
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.5e-06 58.5 136 37.5
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 3.3e-06 57.4 151 34.4
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.3e-06 57.4 136 36.0
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 4.4e-06 57.0 136 33.8
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 4.4e-06 57.0 137 40.9
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 4.4e-06 57.0 140 33.6
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 4.4e-06 57.0 131 39.7
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 7.4e-06 56.2 137 32.1
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 7.4e-06 56.2 72 43.1
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 7.4e-06 56.2 135 34.8
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 9.7e-06 55.8 82 41.5


User provided reference genes

Program Settings