Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 4.9e-232 807.4 392 100.0
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 1.5e-148 530.0 388 66.2
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 3.4e-148 528.9 391 63.9
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 4.4e-148 528.5 383 65.8
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 1.1e-146 523.9 387 63.8
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 6.0e-145 518.1 388 65.5
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 1.7e-144 516.5 391 62.7
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 5.1e-144 515.0 391 64.7
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 6.6e-144 514.6 390 64.9
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 1.1e-143 513.8 388 65.2
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 1.6e-142 510.0 384 65.9
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 2.1e-142 509.6 388 63.7
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 2.8e-142 509.2 388 63.1
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 3.6e-142 508.8 391 63.2
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 4.7e-142 508.4 388 62.9
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 6.2e-142 508.1 391 62.4
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 3.1e-141 505.8 391 62.7
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 3.1e-141 505.8 394 62.2
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 4.0e-141 505.4 388 62.9
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 1.5e-140 503.4 388 63.4
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 2.6e-140 502.7 388 63.7
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 9.9e-140 500.7 382 64.4
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 6.4e-139 498.0 388 63.1
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 6.4e-139 498.0 382 64.4
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.9e-138 496.5 405 61.5
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 3.2e-138 495.7 392 63.0
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 1.2e-137 493.8 388 61.6
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 1.2e-137 493.8 375 64.0
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 1.6e-137 493.4 386 63.5
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 3.5e-137 492.3 388 62.4
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 4.6e-137 491.9 388 62.4
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 7.8e-137 491.1 382 63.6
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 1.0e-136 490.7 416 58.9
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 1.7e-136 490.0 388 63.1
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 7.3e-135 484.6 356 64.9
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 1.6e-134 483.4 396 61.4
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 4.8e-134 481.9 396 61.4
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 1.1e-133 480.7 391 63.2
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 1.4e-133 480.3 388 62.9
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.8e-133 479.9 391 60.4
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 6.9e-133 478.0 376 63.6
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 1.2e-132 477.2 383 62.7
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 1.5e-132 476.9 386 61.1
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 2.6e-132 476.1 389 61.7
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 4.5e-132 475.3 378 61.6
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 9.9e-132 474.2 390 61.3
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 2.9e-131 472.6 391 61.4
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 1.9e-130 469.9 376 62.5
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 1.9e-130 469.9 391 60.4
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 5.4e-130 468.4 376 63.3
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 7.1e-130 468.0 396 60.1
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 3.5e-129 465.7 390 60.3
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 6.7e-128 461.5 380 61.3
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 8.7e-128 461.1 397 59.4
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 4.8e-126 455.3 406 57.1
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 2.0e-124 449.9 381 59.6
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 2.6e-124 449.5 381 60.1
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 1.3e-123 447.2 341 63.6
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.1e-122 444.1 389 57.8
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 2.5e-119 433.0 413 55.9
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.3e-118 430.6 392 56.9
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.7e-115 420.2 388 56.2
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 4.8e-110 402.1 308 64.6
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 4.8e-110 402.1 388 53.1
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 3.1e-109 399.4 305 63.0
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 9.3e-106 387.9 386 53.1
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 3.6e-105 386.0 305 61.6
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.8e-101 373.6 413 50.4
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 1.0e-99 367.9 306 61.1
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 2.2e-99 366.7 418 49.8
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 1.9e-98 363.6 291 60.8
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 1.0e-96 357.8 339 55.2
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 3.3e-95 352.8 293 59.4
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 5.3e-93 345.5 304 56.9
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 6.9e-93 345.1 389 49.4
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 2.0e-92 343.6 390 48.2
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 7.2e-90 335.1 362 50.0
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 3.6e-81 306.2 413 43.8
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 1.3e-78 297.7 211 64.5
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.1e-74 284.6 198 67.2
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 1.1e-74 284.6 205 65.4
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 3.2e-74 283.1 285 51.9
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.8e-72 277.3 419 40.8
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 2.0e-71 273.9 388 41.0
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 2.3e-56 223.8 240 50.4
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 5.2e-56 222.6 277 45.8
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.7e-54 217.6 163 66.9
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 2.3e-40 170.6 187 49.7
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 6.6e-35 152.5 157 49.0
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 1.5e-34 151.4 97 75.3
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 2.9e-30 137.1 130 56.9
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 3.8e-30 136.7 98 68.4
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 7.1e-29 132.5 123 51.2
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 1.5e-23 114.8 116 51.7
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 2.1e-20 104.4 77 66.2
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 3.5e-20 103.6 128 43.0
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 3.5e-20 103.6 128 43.0
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 9.0e-16 89.0 52 73.1
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 9.0e-16 89.0 69 55.1
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 1.7e-14 84.7 104 48.1
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 4.2e-13 80.1 89 47.2
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 1.2e-12 78.6 58 69.0
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 3.9e-11 73.6 60 60.0
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 2.8e-09 67.4 44 77.3
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.1e-08 65.5 60 58.3


User provided reference genes

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