Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G099 Amborella trichopoda HOM05D000365 ORTHO05D000154 2.4e-34 148.3 74 100.0
ATR0693G435 Amborella trichopoda HOM05D000170 ORTHO05D000154 9.3e-15 83.2 63 63.5
ATR0693G296 Amborella trichopoda HOM05D000170 ORTHO05D000154 2.1e-14 82.0 63 60.3
ATR0693G357 Amborella trichopoda HOM05D000170 ORTHO05D000154 1.0e-13 79.7 63 58.7
ATR0680G355 Amborella trichopoda HOM05D000170 ORTHO05D000154 2.5e-12 75.1 63 58.7
Atru.chr6.3020 Acer truncatum HOM05D000170 ORTHO05D000154 2.4e-10 68.6 58 53.4
PSO801G0525 Papaver somniferum HOM05D000170 ORTHO05D000154 2.6e-09 65.1 56 50.0
PSO801G0796 Papaver somniferum HOM05D000170 ORTHO05D000154 3.4e-09 64.7 56 51.8
PSO801G0597 Papaver somniferum HOM05D000170 ORTHO05D000154 4.5e-09 64.3 63 47.6
ATR0693G158 Amborella trichopoda HOM05D000365 ORTHO05D000154 5.8e-09 63.9 58 51.7
PSO339G4726 Papaver somniferum HOM05D000170 ORTHO05D000154 5.8e-09 63.9 56 51.8
TAR624G0172 Trochodendron aralioides HOM05D000170 ORTHO05D000154 1.0e-08 63.2 59 47.5
PSO339G3715 Papaver somniferum HOM05D000170 ORTHO05D000154 1.3e-08 62.8 56 50.0
PSO339G5216 Papaver somniferum HOM05D000170 ORTHO05D000154 1.3e-08 62.8 56 46.4
Eucgr.A01846 Eucalyptus grandis HOM05D000170 ORTHO05D000154 1.7e-08 62.4 56 55.4
TWI18G0690 Tripterygium wilfordii HOM05D000170 ORTHO05D000154 1.7e-08 62.4 55 50.9
PSO339G6193 Papaver somniferum HOM05D000365 ORTHO05D000154 2.9e-08 61.6 51 54.9
Atru.chr6.3028 Acer truncatum HOM05D000170 ORTHO05D000154 3.8e-08 61.2 59 49.2
Eucgr.A01796 Eucalyptus grandis HOM05D000170 ORTHO05D000154 4.9e-08 60.8 56 53.6
PSO339G5964 Papaver somniferum HOM05D000170 ORTHO05D000154 4.9e-08 60.8 55 47.3
CiPaw.03G192000 Carya illinoinensis HOM05D000170 ORTHO05D000154 6.5e-08 60.5 55 50.9
Eucgr.K00951 Eucalyptus grandis HOM05D000170 ORTHO05D000154 6.5e-08 60.5 56 50.0
PSO339G2978 Papaver somniferum HOM05D000170 ORTHO05D000154 6.5e-08 60.5 56 51.8
Haze_13121 Corylus avellana HOM05D000170 ORTHO05D000154 8.4e-08 60.1 55 50.9
Haze_13128 Corylus avellana HOM05D000170 ORTHO05D000154 8.4e-08 60.1 55 50.9
Eucgr.K00950 Eucalyptus grandis HOM05D000170 ORTHO05D000154 1.1e-07 59.7 60 46.7
Eucgr.K00955 Eucalyptus grandis HOM05D000170 ORTHO05D000154 1.1e-07 59.7 56 48.2
Eucgr.K01696 Eucalyptus grandis HOM05D000170 ORTHO05D000154 1.1e-07 59.7 56 48.2
PSO717G0068 Papaver somniferum HOM05D000170 ORTHO05D000154 1.1e-07 59.7 53 47.2
Ciclev10006704m.g Citrus clementina HOM05D000170 ORTHO05D000154 1.4e-07 59.3 58 48.3
Haze_13123 Corylus avellana HOM05D000170 ORTHO05D000154 1.4e-07 59.3 55 50.9
Eucgr.A00759 Eucalyptus grandis HOM05D000170 ORTHO05D000154 1.4e-07 59.3 59 47.5
TWI75G0979 Tripterygium wilfordii HOM05D000170 ORTHO05D000154 1.4e-07 59.3 55 49.1
Atru.chr6.3021 Acer truncatum HOM05D000170 ORTHO05D000154 1.9e-07 58.9 59 47.5
Atru.chr6.3024 Acer truncatum HOM05D000365 ORTHO05D000154 1.9e-07 58.9 59 47.5
Cfa014575 Carpinus fangiana HOM05D000170 ORTHO05D000154 1.9e-07 58.9 55 54.5
TWI36G0502 Tripterygium wilfordii HOM05D000170 ORTHO05D000154 1.9e-07 58.9 55 50.9
Cfa014571 Carpinus fangiana HOM05D000170 ORTHO05D000154 4.2e-07 57.8 55 49.1
Dinv23682 Davidia involucrata HOM05D000170 ORTHO05D000154 4.2e-07 57.8 55 49.1
PSO210G7042 Papaver somniferum HOM05D000365 ORTHO05D000154 4.2e-07 57.8 56 48.2
TAR629G0469 Trochodendron aralioides HOM05D000365 ORTHO05D000154 4.2e-07 57.8 62 46.8
CSS0029228 Camellia sinensis var. sinensis HOM05D000170 ORTHO05D000154 5.5e-07 57.4 64 45.3
MBI01_g40255_MAGBIO Magnolia biondii HOM05D000365 ORTHO05D000154 5.5e-07 57.4 58 48.3
PSO135G0581 Papaver somniferum HOM05D000365 ORTHO05D000154 5.5e-07 57.4 53 50.9
ATR0730G078 Amborella trichopoda HOM05D000365 ORTHO05D000154 7.1e-07 57.0 55 43.6
Cfa014578 Carpinus fangiana HOM05D000365 ORTHO05D000154 7.1e-07 57.0 61 47.5
Haze_13125 Corylus avellana HOM05D000365 ORTHO05D000154 7.1e-07 57.0 54 48.1
Eucgr.A01795 Eucalyptus grandis HOM05D000170 ORTHO05D000154 7.1e-07 57.0 56 51.8
MBI01_g18889_MAGBIO Magnolia biondii HOM05D000365 ORTHO05D000154 7.1e-07 57.0 58 50.0
Potri.019G102900 Populus trichocarpa HOM05D000170 ORTHO05D000154 7.1e-07 57.0 64 48.4
Cfa014573 Carpinus fangiana HOM05D000170 ORTHO05D000154 9.3e-07 56.6 55 50.9
CSS0023656 Camellia sinensis var. sinensis HOM05D000170 ORTHO05D000154 1.2e-06 56.2 64 45.3
Ciclev10005297m.g Citrus clementina HOM05D000170 ORTHO05D000154 1.2e-06 56.2 61 45.9
Haze_13127 Corylus avellana HOM05D000170 ORTHO05D000154 1.2e-06 56.2 55 49.1
PSO063G3268 Papaver somniferum HOM05D000365 ORTHO05D000154 1.2e-06 56.2 53 47.2
PSO210G6343 Papaver somniferum HOM05D000365 ORTHO05D000154 1.2e-06 56.2 56 48.2
PSO724G1023 Papaver somniferum HOM05D000365 ORTHO05D000154 1.2e-06 56.2 53 49.1
CSS0042551 Camellia sinensis var. sinensis HOM05D000170 ORTHO05D000154 1.6e-06 55.8 64 43.8
CiPaw.03G174100 Carya illinoinensis HOM05D000170 ORTHO05D000154 1.6e-06 55.8 55 49.1
Ciclev10012087m.g Citrus clementina HOM05D000170 ORTHO05D000154 1.6e-06 55.8 62 43.5
PSO421G0651 Papaver somniferum HOM05D000365 ORTHO05D000154 1.6e-06 55.8 50 48.0
PSO717G0060 Papaver somniferum HOM05D000170 ORTHO05D000154 1.6e-06 55.8 53 43.4
Prupe.3G235300 Prunus persica HOM05D000170 ORTHO05D000154 1.6e-06 55.8 65 40.0
QL09p018290 Quercus lobata HOM05D000170 ORTHO05D000154 1.6e-06 55.8 53 50.9
CSS0036567 Camellia sinensis var. sinensis HOM05D000170 ORTHO05D000154 2.1e-06 55.5 64 45.3
CiPaw.03G173500 Carya illinoinensis HOM05D000170 ORTHO05D000154 2.1e-06 55.5 52 48.1
CiPaw.03G173700 Carya illinoinensis HOM05D000170 ORTHO05D000154 2.1e-06 55.5 52 48.1
ClCG02G017480 Citrullus lanatus HOM05D000170 ORTHO05D000154 2.1e-06 55.5 56 44.6
Haze_13122 Corylus avellana HOM05D000170 ORTHO05D000154 2.1e-06 55.5 54 48.1
QL09p018354 Quercus lobata HOM05D000170 ORTHO05D000154 2.1e-06 55.5 53 49.1
SalBow7G2344 Salvia bowleyana HOM05D000365 ORTHO05D000154 2.1e-06 55.5 52 50.0
TWI36G0072 Tripterygium wilfordii HOM05D000170 ORTHO05D000154 2.1e-06 55.5 60 45.0
CiPaw.03G173900 Carya illinoinensis HOM05D000170 ORTHO05D000154 2.7e-06 55.1 52 48.1
Haze_13129 Corylus avellana HOM05D000365 ORTHO05D000154 2.7e-06 55.1 55 47.3
Eucgr.A01797 Eucalyptus grandis HOM05D000170 ORTHO05D000154 2.7e-06 55.1 56 50.0
PSO421G0223 Papaver somniferum HOM05D000365 ORTHO05D000154 2.7e-06 55.1 56 46.4
SalBow7G0568 Salvia bowleyana HOM05D000365 ORTHO05D000154 2.7e-06 55.1 52 50.0
Sed0024387 Sechium edule HOM05D000365 ORTHO05D000154 2.7e-06 55.1 59 45.8
Atru.chr6.3026 Acer truncatum HOM05D000170 ORTHO05D000154 3.5e-06 54.7 50 48.0
Aqoxy1G02608 Aquilegia oxysepala HOM05D000170 ORTHO05D000154 3.5e-06 54.7 51 49.0
Cfa014570 Carpinus fangiana HOM05D000170 ORTHO05D000154 3.5e-06 54.7 54 48.1
CiPaw.03G173300 Carya illinoinensis HOM05D000170 ORTHO05D000154 3.5e-06 54.7 52 48.1
Ciclev10008718m.g Citrus clementina HOM05D000365 ORTHO05D000154 3.5e-06 54.7 65 40.0
Haze_13126 Corylus avellana HOM05D000170 ORTHO05D000154 3.5e-06 54.7 55 50.9
CsaV3_6G013080 Cucumis sativus L. HOM05D000170 ORTHO05D000154 3.5e-06 54.7 56 42.9
Lj1A730G54 Lonicera japonica HOM05D000170 ORTHO05D000154 3.5e-06 54.7 51 51.0
Lj1A733G57 Lonicera japonica HOM05D000170 ORTHO05D000154 3.5e-06 54.7 51 51.0
Oeu045085.1 Olea europaea HOM05D000170 ORTHO05D000154 3.5e-06 54.7 58 34.5
PSO732G0076 Papaver somniferum HOM05D000170 ORTHO05D000154 3.5e-06 54.7 50 44.0
QL08p037919 Quercus lobata HOM05D000170 ORTHO05D000154 3.5e-06 54.7 52 48.1
QL08p037960 Quercus lobata HOM05D000170 ORTHO05D000154 3.5e-06 54.7 52 46.2
QL08p037995 Quercus lobata HOM05D000170 ORTHO05D000154 3.5e-06 54.7 52 46.2
TAR626G0339 Trochodendron aralioides HOM05D000170 ORTHO05D000154 3.5e-06 54.7 59 44.1
Atru.chr6.3031 Acer truncatum HOM05D000170 ORTHO05D000154 4.6e-06 54.3 55 45.5
Aqoxy4G01291 Aquilegia oxysepala HOM05D000170 ORTHO05D000154 4.6e-06 54.3 51 49.0
Haze_13120 Corylus avellana HOM05D000170 ORTHO05D000154 4.6e-06 54.3 54 48.1
Duzib114G0675 Durio zibethinus HOM05D000365 ORTHO05D000154 4.6e-06 54.3 52 48.1
Gohir.A11G293300 Gossypium hirsutum HOM05D000170 ORTHO05D000154 4.6e-06 54.3 69 42.0
PSO732G0383 Papaver somniferum HOM05D000170 ORTHO05D000154 4.6e-06 54.3 50 44.0
TWI36G0446 Tripterygium wilfordii HOM05D000170 ORTHO05D000154 4.6e-06 54.3 55 43.6
Aqoxy5G01724 Aquilegia oxysepala HOM05D000170 ORTHO05D000154 6.0e-06 53.9 59 40.7
Aqoxy7G00359 Aquilegia oxysepala HOM05D000365 ORTHO05D000154 6.0e-06 53.9 50 50.0
ClCG02G017470 Citrullus lanatus HOM05D000170 ORTHO05D000154 6.0e-06 53.9 56 42.9
Haze_13119 Corylus avellana HOM05D000170 ORTHO05D000154 6.0e-06 53.9 55 45.5
MELO3C013600.2 Cucumis melo HOM05D000170 ORTHO05D000154 6.0e-06 53.9 56 42.9
QL08p037979 Quercus lobata HOM05D000170 ORTHO05D000154 6.0e-06 53.9 50 48.0
Sc06g0009230 Simmondsia chinensis HOM05D000170 ORTHO05D000154 6.0e-06 53.9 55 49.1
TWI75G1608 Tripterygium wilfordii HOM05D000170 ORTHO05D000154 6.0e-06 53.9 55 43.6
arahy.Tifrunner.gnm1.ann1.DS2C3V Arachis hypogaea HOM05D000365 ORTHO05D000154 7.9e-06 53.5 56 48.2
CiPaw.04G124100 Carya illinoinensis HOM05D000365 ORTHO05D000154 7.9e-06 53.5 50 54.0
Nn1g08281 Nelumbo nucifera HOM05D000365 ORTHO05D000154 7.9e-06 53.5 63 42.9
SGA_v2.0_scaffold47G17798 Striga asiatica HOM05D000365 ORTHO05D000154 7.9e-06 53.5 49 51.0


User provided reference genes

Program Settings